[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-1930
DESCRIPTION : mmu-mir-1930 MI0009919 Mus musculus miR-1930 stem-loop
CHROMOSOME : 10
SPAN : 77103969 - 77104052
LENGTH : 84
SEQUENCE : ATGCCCACGGTCACCTCCATAGTACCTGCAGCGTGCTTGACTTTCTCTATGGTGCAGTTACTGTGGCTGTGGCTGTGTTCGTGC
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-1930
ACCID : MI0009919
PARENT : mmu-mir-1930
CHROMOSOME : 10
START : 77103969
STOP : 77104052
OFFSET : 13..34
SEQUENCE : ACCTCCATAGTACCTGCAGCGT
STRAND : +
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*** MATURE ***
____________________________________________________________________________________
ATGCCCACGGTCACCTCCATAGTACCTGCAGCGTGCTTGACTTTCTCTATGGTGCAGTTACTGTGGCTGTGGCTGTGTTCGTGC REF 10 77103969 - 77104052
ACCTCCATAGTACCTGCAGCGT MATURE 10 77103982 - 77104086 mmu-miR-1930 +
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............CCTCCATAGTACCTGCAGCGT................................................... read_272171_2_0_0_0_0_1 MATURE 3 33.33 2 33.33 1 33.33 21
.............CCTCCATAGTACCTGCAGCG.................................................... read_118907_0_0_1_0_0_1 MATURE 2 22.22 1 16.67 1 33.33 20
.............CCTCCATAGTACCTGCAGCGTt.................................................. read_284057_0_0_1_0_0_1 MATURE 2 22.22 1 16.67 1 33.33 t 21
.............CCTCCATAGTACCTGCAGCGTa.................................................. read_353742_0_0_1_0_0_0 MATURE 1 11.11 1 16.67 0 0.00 a 21
.............CCTCCATAGTACCTGaAGCGTa.................................................. read_340261_0_1_0_0_0_0 MATURE 1 11.11 1 16.67 0 0.00 a 15A5
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9 6 3
(66.67) (33.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 6 3 9 100.00%
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6 3 9
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