[BEGIN]

REFERENCE HAIRPIN
**************************************************************************************************************
ID                 : mmu-mir-192
DESCRIPTION        : mmu-mir-192 MI0000551 Mus musculus miR-192 stem-loop
CHROMOSOME         : 19
SPAN               : 6264844 - 6264932
LENGTH             : 89
SEQUENCE           : CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC
OVERHANG THRESHOLD : 75%
**************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-192
ACCID      : MI0000551
PARENT     : mmu-mir-192
CHROMOSOME : 19
START      : 6264844
STOP       : 6264932
OFFSET     : 14..34
SEQUENCE   : CTGACCTATGAATTGACAGCC
STRAND     : +
******************************



*** MATURE ***
_________________________________________________________________________________________
CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC REF                  19                   6264844 - 6264932    
             CTGACCTATGAATTGACAGCC                                                        MATURE               19                   6264858 - 6264966    mmu-miR-192          +                    
_________________________________________________________________________________________

                                                                                     -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...............GACCTATGAATTGACAGCCAGT.....................................................   read_353216_9_6_4_2_2_3       MATURE           26        17.93           19        16.67            7        22.58                        22   
..............TGACCTATGAATTGACAGCC........................................................   read_248491_7_7_5_1_2_1       MATURE           23        15.86           19        16.67            4        12.90                        20   
..............TGACCTATGAATTGACAGC.........................................................   read_349240_5_5_2_1_1_0       MATURE           14         9.66           12        10.53            2         6.45                        19   
..............TGACCTATGAATTGACAGCCA.......................................................   read_225410_5_4_1_0_0_0       MATURE           10         6.90           10         8.77            0         0.00                        21   
...............GACCTATGAATTGACAGCCAG......................................................   read_278197_2_5_2_0_0_1       MATURE           10         6.90            9         7.89            1         3.23                        21   
..............TGACCTATGAATTGACAGCCAt......................................................   read_306763_0_2_4_1_1_0       MATURE            8         5.52            6         5.26            2         6.45            t           21   
...............GACCTATGAATTGACAGCCA.......................................................   read_330470_0_1_1_0_0_2       MATURE            4         2.76            2         1.75            2         6.45                        20   
..............TGACCTATGAATTGACAGCCAa......................................................   read_225074_2_0_0_0_0_1       MATURE            3         2.07            2         1.75            1         3.23            a           21   
...............GACCTATGAATTGACAGCCAt......................................................     read_9536_0_1_2_0_0_0       MATURE            3         2.07            3         2.63            0         0.00            t           20   
..............TGACCTATGAATTGACAGCCt.......................................................   read_232982_1_1_0_1_0_0       MATURE            3         2.07            2         1.75            1         3.23            t           20   
..............TGACCTATGAATTGACAGCa........................................................   read_311359_0_2_0_1_0_0       MATURE            3         2.07            2         1.75            1         3.23            a           19   
..............TGACCTATGAATTGACAG..........................................................    read_99579_0_1_0_0_1_0       MATURE            2         1.38            1         0.88            1         3.23                        18   
...............GACCTATGAATTGACAGCCAGa.....................................................   read_271916_0_0_1_0_0_1       MATURE            2         1.38            1         0.88            1         3.23            a           21   
...............GACCTATGAATTGACAGCCAGg.....................................................   read_390960_0_1_1_0_0_0       MATURE            2         1.38            2         1.75            0         0.00            g           21   
..............TGACCTATGAATTGACAGCCc.......................................................   read_365231_2_0_0_0_0_0       MATURE            2         1.38            2         1.75            0         0.00            c           20   
...............GACCTATGAATTGAtAGCCAGT.....................................................   read_312362_2_0_0_0_0_0       MATURE            2         1.38            2         1.75            0         0.00                      14T7   
..............TGACCTATGAATTGACAGCCAta.....................................................   read_209829_0_1_0_0_1_0       MATURE            2         1.38            1         0.88            1         3.23           ta           21   
...............GACCTATGAATTGACAGCCAa......................................................   read_207853_2_0_0_0_0_0       MATURE            2         1.38            2         1.75            0         0.00            a           20   
...............GACCTATGAATTtACAGCCAGT.....................................................   read_334896_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                      12T9   
..............TGACCTATGAATTGACAGCaa.......................................................   read_286501_0_0_0_1_0_0       MATURE            1         0.69            0         0.00            1         3.23           aa           19   
...............GACCTATGAATTGACAGCCAat.....................................................   read_196160_0_0_0_0_1_0       MATURE            1         0.69            0         0.00            1         3.23           at           20   
..............TGACCcATGAATTGACAGCC........................................................   read_211313_0_0_0_0_1_0       MATURE            1         0.69            0         0.00            1         3.23                      5C14   
...............GACCTATGAATTGAaAGCCAG......................................................    read_10104_1_0_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                      14A6   
...............GACCTATGAATTGACAGCaAGT.....................................................   read_322932_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                      18A3   
...............GACCTATGAATTGACAGC.........................................................   read_262364_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                        18   
..............TGACCTATGAATTGACAGCCgt......................................................   read_181936_0_0_1_0_0_0       MATURE            1         0.69            1         0.88            0         0.00           gt           20   
..............TGACCTATGAATTGAaAGCCAt......................................................   read_391967_0_0_0_1_0_0       MATURE            1         0.69            0         0.00            1         3.23            t         15A5   
..............TGACCTATGAATTGACAGCCAaga....................................................   read_198296_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00          aga           21   
...............GACCTATGAATTGACAGCCcg......................................................   read_368486_0_0_1_0_0_0       MATURE            1         0.69            1         0.88            0         0.00           cg           19   
..............TGACCTATGAATTGcCAGCCAGT.....................................................   read_232818_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                      14C8   
..............TGACCTATGAATTGACAGCCAaa.....................................................   read_374585_1_0_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00           aa           21   
..............TGACCTATGAATTGAaAGCCA.......................................................   read_375639_1_0_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                      15A5   
...............GACCTATGAATTGACAGgCAGT.....................................................   read_165282_0_0_0_0_0_1       MATURE            1         0.69            0         0.00            1         3.23                      17G4   
..............TGACCTATGAATTGACAGCCAtt.....................................................    read_39857_0_0_0_0_1_0       MATURE            1         0.69            0         0.00            1         3.23           tt           21   
...............GACtTATGAATTGACAGCCAG......................................................   read_178386_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                      3T17   
..............TGACCTATGAATTGACAGCCAGa.....................................................   read_375243_1_0_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00            a           22   
...............GACCTATGAATTGACAGCCAtaa....................................................    read_24203_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00          taa           20   
..............TGACCTATGAATTGACAGa.........................................................   read_105738_0_0_0_0_1_0       MATURE            1         0.69            0         0.00            1         3.23            a           18   
...............GAaCTATGAATTGACAGCCAGT.....................................................    read_21183_0_0_1_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                      2A19   
...............GACCTATGAATTGACAGCCAag.....................................................   read_112525_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00           ag           20   
..............TGACCTATGAATTGACAGCCtt......................................................   read_382096_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00           tt           20   
...............GACCTATGAATTGACAGCC........................................................   read_132992_0_1_0_0_0_0       MATURE            1         0.69            1         0.88            0         0.00                        19   
                                                                                                                                    ----------                ----------                ----------   
                                                                                                                                           145                       114                        31                                          
                                                                                                                                                                 (78.62)                   (21.38)                                       




*** OTHER ***
_________________________________________________________________________________________
CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC REF                  19                   6264844 - 6264932    
             CTGACCTATGAATTGACAGCC                                                        MATURE               19                   6264858 - 6264966    mmu-miR-192          +                    
_________________________________________________________________________________________

                                                                                     -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.........................................................TGCCAATTCCATAGGTCACAGt...........   read_117291_0_0_1_0_0_0        OTHER            1       100.00            1       100.00            0            0            t           21   
                                                                                                                                    ----------                ----------                ----------   
                                                                                                                                             1                         1                         0                                          
                                                                                                                                                                (100.00)                    (0.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE             114              31             145          99.32%
          OTHER               1               0               1           0.68%
                     ----------      ----------      ----------                
                            115              31             146                



[END]
