[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-192
DESCRIPTION : mmu-mir-192 MI0000551 Mus musculus miR-192 stem-loop
CHROMOSOME : 19
SPAN : 6264844 - 6264932
LENGTH : 89
SEQUENCE : CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-192
ACCID : MI0000551
PARENT : mmu-mir-192
CHROMOSOME : 19
START : 6264844
STOP : 6264932
OFFSET : 14..34
SEQUENCE : CTGACCTATGAATTGACAGCC
STRAND : +
******************************
*** MATURE ***
_________________________________________________________________________________________
CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC REF 19 6264844 - 6264932
CTGACCTATGAATTGACAGCC MATURE 19 6264858 - 6264966 mmu-miR-192 +
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............GACCTATGAATTGACAGCCAGT..................................................... read_353216_9_6_4_2_2_3 MATURE 26 17.93 19 16.67 7 22.58 22
..............TGACCTATGAATTGACAGCC........................................................ read_248491_7_7_5_1_2_1 MATURE 23 15.86 19 16.67 4 12.90 20
..............TGACCTATGAATTGACAGC......................................................... read_349240_5_5_2_1_1_0 MATURE 14 9.66 12 10.53 2 6.45 19
..............TGACCTATGAATTGACAGCCA....................................................... read_225410_5_4_1_0_0_0 MATURE 10 6.90 10 8.77 0 0.00 21
...............GACCTATGAATTGACAGCCAG...................................................... read_278197_2_5_2_0_0_1 MATURE 10 6.90 9 7.89 1 3.23 21
..............TGACCTATGAATTGACAGCCAt...................................................... read_306763_0_2_4_1_1_0 MATURE 8 5.52 6 5.26 2 6.45 t 21
...............GACCTATGAATTGACAGCCA....................................................... read_330470_0_1_1_0_0_2 MATURE 4 2.76 2 1.75 2 6.45 20
..............TGACCTATGAATTGACAGCCAa...................................................... read_225074_2_0_0_0_0_1 MATURE 3 2.07 2 1.75 1 3.23 a 21
...............GACCTATGAATTGACAGCCAt...................................................... read_9536_0_1_2_0_0_0 MATURE 3 2.07 3 2.63 0 0.00 t 20
..............TGACCTATGAATTGACAGCCt....................................................... read_232982_1_1_0_1_0_0 MATURE 3 2.07 2 1.75 1 3.23 t 20
..............TGACCTATGAATTGACAGCa........................................................ read_311359_0_2_0_1_0_0 MATURE 3 2.07 2 1.75 1 3.23 a 19
..............TGACCTATGAATTGACAG.......................................................... read_99579_0_1_0_0_1_0 MATURE 2 1.38 1 0.88 1 3.23 18
...............GACCTATGAATTGACAGCCAGa..................................................... read_271916_0_0_1_0_0_1 MATURE 2 1.38 1 0.88 1 3.23 a 21
...............GACCTATGAATTGACAGCCAGg..................................................... read_390960_0_1_1_0_0_0 MATURE 2 1.38 2 1.75 0 0.00 g 21
..............TGACCTATGAATTGACAGCCc....................................................... read_365231_2_0_0_0_0_0 MATURE 2 1.38 2 1.75 0 0.00 c 20
...............GACCTATGAATTGAtAGCCAGT..................................................... read_312362_2_0_0_0_0_0 MATURE 2 1.38 2 1.75 0 0.00 14T7
..............TGACCTATGAATTGACAGCCAta..................................................... read_209829_0_1_0_0_1_0 MATURE 2 1.38 1 0.88 1 3.23 ta 21
...............GACCTATGAATTGACAGCCAa...................................................... read_207853_2_0_0_0_0_0 MATURE 2 1.38 2 1.75 0 0.00 a 20
...............GACCTATGAATTtACAGCCAGT..................................................... read_334896_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 12T9
..............TGACCTATGAATTGACAGCaa....................................................... read_286501_0_0_0_1_0_0 MATURE 1 0.69 0 0.00 1 3.23 aa 19
...............GACCTATGAATTGACAGCCAat..................................................... read_196160_0_0_0_0_1_0 MATURE 1 0.69 0 0.00 1 3.23 at 20
..............TGACCcATGAATTGACAGCC........................................................ read_211313_0_0_0_0_1_0 MATURE 1 0.69 0 0.00 1 3.23 5C14
...............GACCTATGAATTGAaAGCCAG...................................................... read_10104_1_0_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 14A6
...............GACCTATGAATTGACAGCaAGT..................................................... read_322932_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 18A3
...............GACCTATGAATTGACAGC......................................................... read_262364_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 18
..............TGACCTATGAATTGACAGCCgt...................................................... read_181936_0_0_1_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 gt 20
..............TGACCTATGAATTGAaAGCCAt...................................................... read_391967_0_0_0_1_0_0 MATURE 1 0.69 0 0.00 1 3.23 t 15A5
..............TGACCTATGAATTGACAGCCAaga.................................................... read_198296_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 aga 21
...............GACCTATGAATTGACAGCCcg...................................................... read_368486_0_0_1_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 cg 19
..............TGACCTATGAATTGcCAGCCAGT..................................................... read_232818_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 14C8
..............TGACCTATGAATTGACAGCCAaa..................................................... read_374585_1_0_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 aa 21
..............TGACCTATGAATTGAaAGCCA....................................................... read_375639_1_0_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 15A5
...............GACCTATGAATTGACAGgCAGT..................................................... read_165282_0_0_0_0_0_1 MATURE 1 0.69 0 0.00 1 3.23 17G4
..............TGACCTATGAATTGACAGCCAtt..................................................... read_39857_0_0_0_0_1_0 MATURE 1 0.69 0 0.00 1 3.23 tt 21
...............GACtTATGAATTGACAGCCAG...................................................... read_178386_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 3T17
..............TGACCTATGAATTGACAGCCAGa..................................................... read_375243_1_0_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 a 22
...............GACCTATGAATTGACAGCCAtaa.................................................... read_24203_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 taa 20
..............TGACCTATGAATTGACAGa......................................................... read_105738_0_0_0_0_1_0 MATURE 1 0.69 0 0.00 1 3.23 a 18
...............GAaCTATGAATTGACAGCCAGT..................................................... read_21183_0_0_1_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 2A19
...............GACCTATGAATTGACAGCCAag..................................................... read_112525_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 ag 20
..............TGACCTATGAATTGACAGCCtt...................................................... read_382096_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 tt 20
...............GACCTATGAATTGACAGCC........................................................ read_132992_0_1_0_0_0_0 MATURE 1 0.69 1 0.88 0 0.00 19
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145 114 31
(78.62) (21.38)
*** OTHER ***
_________________________________________________________________________________________
CGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTACTCTTTTCTCTCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCACC REF 19 6264844 - 6264932
CTGACCTATGAATTGACAGCC MATURE 19 6264858 - 6264966 mmu-miR-192 +
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................................................TGCCAATTCCATAGGTCACAGt........... read_117291_0_0_1_0_0_0 OTHER 1 100.00 1 100.00 0 0 t 21
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1 1 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
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MATURE 114 31 145 99.32%
OTHER 1 0 1 0.68%
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115 31 146
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