[BEGIN]

REFERENCE HAIRPIN
*****************************************************************************************************
ID                 : mmu-mir-190b
DESCRIPTION        : mmu-mir-190b MI0005478 Mus musculus miR-190b stem-loop
CHROMOSOME         : 3
SPAN               : 89873942 - 89874021
LENGTH             : 80
SEQUENCE           : TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG
OVERHANG THRESHOLD : 75%
*****************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-190b
ACCID      : MI0005478
PARENT     : mmu-mir-190b
CHROMOSOME : 3
START      : 89873942
STOP       : 89874021
OFFSET     : 11..31
SEQUENCE   : TGATATGTTTGATATTGGGTT
STRAND     : +
******************************



*** MATURE ***
________________________________________________________________________________
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG REF                  3                    89873942 - 89874021  
          TGATATGTTTGATATTGGGTT                                                  MATURE               3                    89873953 - 89874052  mmu-miR-190b         +                    
________________________________________________________________________________

                                                                            -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...........GATATGTTTGATATTGGGTTGT................................................   read_178763_2_0_0_0_1_0       MATURE            3        23.08            2        28.57            1        16.67                        22   
...........GATATGTTTGATATTGGGTTt.................................................   read_273216_0_2_0_0_0_0       MATURE            2        15.38            2        28.57            0         0.00            t           20   
...........GATATGTTTGATATTGGtTTGT................................................   read_221805_0_0_0_1_0_1       MATURE            2        15.38            0         0.00            2        33.33                      17T4   
...........GATATGTTTGATATTGtGTTG.................................................    read_86176_1_0_0_0_0_0       MATURE            1         7.69            1        14.29            0         0.00                      16T4   
...........GATATGTTTGATATTGtGTTGT................................................   read_143864_0_1_0_0_0_0       MATURE            1         7.69            1        14.29            0         0.00                      16T5   
...........GATATGTTTGATATTGGGTTat................................................   read_400256_0_0_0_1_0_0       MATURE            1         7.69            0         0.00            1        16.67           at           20   
...........GATATGTTTGATATTGGGTTG.................................................    read_98836_0_0_0_1_0_0       MATURE            1         7.69            0         0.00            1        16.67                        21   
...........GATATGTTTGATATTGGGTT..................................................   read_336387_0_0_0_0_1_0       MATURE            1         7.69            0         0.00            1        16.67                        20   
...........GATATGTTTGATATTGGtTTG.................................................   read_261026_1_0_0_0_0_0       MATURE            1         7.69            1        14.29            0         0.00                      17T3   
                                                                                                                           ----------                ----------                ----------   
                                                                                                                                   13                         7                         6                                          
                                                                                                                                                        (53.85)                   (46.15)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               7               6              13         100.00%
                     ----------      ----------      ----------                
                              7               6              13                



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