[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-190b
DESCRIPTION : mmu-mir-190b MI0005478 Mus musculus miR-190b stem-loop
CHROMOSOME : 3
SPAN : 89873942 - 89874021
LENGTH : 80
SEQUENCE : TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-190b
ACCID : MI0005478
PARENT : mmu-mir-190b
CHROMOSOME : 3
START : 89873942
STOP : 89874021
OFFSET : 11..31
SEQUENCE : TGATATGTTTGATATTGGGTT
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTAAATTATGAACCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG REF 3 89873942 - 89874021
TGATATGTTTGATATTGGGTT MATURE 3 89873953 - 89874052 mmu-miR-190b +
________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........GATATGTTTGATATTGGGTTGT................................................ read_178763_2_0_0_0_1_0 MATURE 3 23.08 2 28.57 1 16.67 22
...........GATATGTTTGATATTGGGTTt................................................. read_273216_0_2_0_0_0_0 MATURE 2 15.38 2 28.57 0 0.00 t 20
...........GATATGTTTGATATTGGtTTGT................................................ read_221805_0_0_0_1_0_1 MATURE 2 15.38 0 0.00 2 33.33 17T4
...........GATATGTTTGATATTGtGTTG................................................. read_86176_1_0_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 16T4
...........GATATGTTTGATATTGtGTTGT................................................ read_143864_0_1_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 16T5
...........GATATGTTTGATATTGGGTTat................................................ read_400256_0_0_0_1_0_0 MATURE 1 7.69 0 0.00 1 16.67 at 20
...........GATATGTTTGATATTGGGTTG................................................. read_98836_0_0_0_1_0_0 MATURE 1 7.69 0 0.00 1 16.67 21
...........GATATGTTTGATATTGGGTT.................................................. read_336387_0_0_0_0_1_0 MATURE 1 7.69 0 0.00 1 16.67 20
...........GATATGTTTGATATTGGtTTG................................................. read_261026_1_0_0_0_0_0 MATURE 1 7.69 1 14.29 0 0.00 17T3
---------- ---------- ----------
13 7 6
(53.85) (46.15)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 7 6 13 100.00%
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7 6 13
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