[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************
ID : mmu-mir-18b
DESCRIPTION : mmu-mir-18b MI0005483 Mus musculus miR-18b stem-loop
CHROMOSOME : X
SPAN : 50095508 - 50095590
LENGTH : 83
SEQUENCE : TCTCTTGTGTTAAGGTGCATCTAGTGCTGTTAGTGAAGCAGCTTACAATCTACTGCCCTAAATGCCCCTTCTCGCACAGGCTA
OVERHANG THRESHOLD : 75%
********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-18b
ACCID : MI0005483
PARENT : mmu-mir-18b
CHROMOSOME : X
START : 50095508
STOP : 50095590
OFFSET : 11..33
SEQUENCE : TAAGGTGCATCTAGTGCTGTTAG
STRAND : -
******************************
*** MATURE ***
___________________________________________________________________________________
TCTCTTGTGTTAAGGTGCATCTAGTGCTGTTAGTGAAGCAGCTTACAATCTACTGCCCTAAATGCCCCTTCTCGCACAGGCTA REF X 50095508 - 50095590
TAAGGTGCATCTAGTGCTGTTAG MATURE X 50095519 - 50095623 mmu-miR-18b -
___________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........AAGGTGCATCTAGTGCTGTTAG................................................... read_300662_2_2_2_3_11_12 MATURE 32 30.48 6 12.00 26 47.27 22
...........AAGGTGCATCTAGTGCTGTTA.................................................... read_3907_7_4_6_2_3_1 MATURE 23 21.90 17 34.00 6 10.91 21
...........AAGGTGCATCTAGTGCTGTT..................................................... read_182815_3_5_2_0_0_1 MATURE 11 10.48 10 20.00 1 1.82 20
...........AAGGTGCATCTAGTGCTGTTAt................................................... read_340064_2_2_1_0_1_0 MATURE 6 5.71 5 10.00 1 1.82 t 21
...........AAGGTGCATCTAGTGCaGTT..................................................... read_343524_0_0_3_0_0_1 MATURE 4 3.81 3 6.00 1 1.82 16A3
...........AAGGTGCATCTAGTGCTGT...................................................... read_294136_0_1_0_2_0_1 MATURE 4 3.81 1 2.00 3 5.45 19
...........AAGGTGCATCTAGTGCTGTTAa................................................... read_283178_0_0_1_2_0_0 MATURE 3 2.86 1 2.00 2 3.64 a 21
...........AAGGTGCATCTAGTGCT........................................................ read_300304_0_0_0_0_1_1 MATURE 2 1.90 0 0.00 2 3.64 17
...........AAGGTGCATCTAGTGCTG....................................................... read_21508_0_0_1_1_0_0 MATURE 2 1.90 1 2.00 1 1.82 18
...........AAGGTGCATCTAGTGCTGTTt.................................................... read_334815_0_0_1_0_0_1 MATURE 2 1.90 1 2.00 1 1.82 t 20
...........AAGGTGCATCTAGTGtTGTT..................................................... read_287189_0_1_0_0_0_0 MATURE 1 0.95 1 2.00 0 0.00 15T4
...........AAGGTGCATCTAGTGCTGTTg.................................................... read_283511_0_0_1_0_0_0 MATURE 1 0.95 1 2.00 0 0.00 g 20
...........AAGGTGCATCTAGTGCTGTTAGa.................................................. read_409672_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.82 a 22
...........AAGGTGCATCTAGTGCTGTTtt................................................... read_104995_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.82 tt 20
...........AAGGTGCATCTAGTGCTGaTA.................................................... read_18005_0_0_1_0_0_0 MATURE 1 0.95 1 2.00 0 0.00 18A2
...........AAGGTGCATCTAGTGCTGcTA.................................................... read_81868_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.82 18C2
...........AAGGTGCATCTAGTGCaGTTA.................................................... read_266798_0_0_1_0_0_0 MATURE 1 0.95 1 2.00 0 0.00 16A4
...........AAGGTGCATCTgGTGCTGTTAG................................................... read_68550_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.82 11G10
...........AAGGTGCATCTAGTGCTGa...................................................... read_15715_0_0_0_1_0_0 MATURE 1 0.95 0 0.00 1 1.82 a 18
...........AAGGcGCATCTAGTGCTGTTAG................................................... read_75190_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.82 4C17
...........AAGGTGaATCTAGTGCTGTTA.................................................... read_173558_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.82 6A14
...........AAGGTGCATCTAGTGCTGTTtg................................................... read_116439_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.82 tg 20
...........AAGGTGCATCTAGTGCTcTTAG................................................... read_257817_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.82 17C4
...........AAGGTGCATCTAGTGCTGTaa.................................................... read_283462_0_0_1_0_0_0 MATURE 1 0.95 1 2.00 0 0.00 aa 19
...........AAGGTGCATCTAGTGCTtTTAG................................................... read_124241_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.82 17T4
...........AAGGTGCATCTAGTGCaGTTAG................................................... read_15595_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.82 16A5
---------- ---------- ----------
105 50 55
(47.62) (52.38)
*** OTHER ***
___________________________________________________________________________________
TCTCTTGTGTTAAGGTGCATCTAGTGCTGTTAGTGAAGCAGCTTACAATCTACTGCCCTAAATGCCCCTTCTCGCACAGGCTA REF X 50095508 - 50095590
TAAGGTGCATCTAGTGCTGTTAG MATURE X 50095519 - 50095623 mmu-miR-18b -
___________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................ACTGCCCTAAATGCCCCTTCT............ read_276554_0_1_0_0_1_0 OTHER 2 40.00 1 100.00 1 25.00 21
....................................................CTGCCCTAAATGCCCCTTCTCG.......... read_72478_0_0_0_1_1_0 OTHER 2 40.00 0 0.00 2 50.00 22
...................................................ACTGCCCTAAATGCCCCTTCTCG.......... read_284145_0_0_0_1_0_0 OTHER 1 20.00 0 0.00 1 25.00 23
---------- ---------- ----------
5 1 4
(20.00) (80.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 50 55 105 95.45%
OTHER 1 4 5 4.55%
---------- ---------- ----------
51 59 110
[END]