[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************
ID : mmu-mir-185
DESCRIPTION : mmu-mir-185 MI0000227 Mus musculus miR-185 stem-loop
CHROMOSOME : 16
SPAN : 18327494 - 18327558
LENGTH : 65
SEQUENCE : AGGGATTGGAGAGAAAGGCAGTTCCTGATGGTCCCCTCCCAGGGGCTGGCTTTCCTCTGGTCCTT
OVERHANG THRESHOLD : 75%
**************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-185
ACCID : MI0000227
PARENT : mmu-mir-185
CHROMOSOME : 16
START : 18327494
STOP : 18327558
OFFSET : 7..28
SEQUENCE : TGGAGAGAAAGGCAGTTCCTGA
STRAND : -
******************************
*** MATURE ***
_________________________________________________________________
AGGGATTGGAGAGAAAGGCAGTTCCTGATGGTCCCCTCCCAGGGGCTGGCTTTCCTCTGGTCCTT REF 16 18327494 - 18327558
TGGAGAGAAAGGCAGTTCCTGA MATURE 16 18327501 - 18327586 mmu-miR-185 -
_________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......GGAGAGAAAGGCAGTTCCTGA...................................... read_176715_158_140_112_49_69_54 MATURE 582 40.70 410 39.16 172 44.91 21
.......GGAGAGAAAGGCAGTTCCTGAT..................................... read_203649_52_48_32_8_8_8 MATURE 156 10.91 132 12.61 24 6.27 22
.......GGAGAGAAAGGCAGTTCCTGt...................................... read_60299_35_35_21_9_5_16 MATURE 121 8.46 91 8.69 30 7.83 t 20
.......GGAGAGAAAGGCAGTTCCTGAa..................................... read_259280_31_32_18_3_11_6 MATURE 101 7.06 81 7.74 20 5.22 a 21
.......GGAGAGAAAGGCAGTTCCTG....................................... read_56443_17_21_21_12_10_17 MATURE 98 6.85 59 5.64 39 10.18 20
.......GGAGAGAAAGGCAGTTCCT........................................ read_38141_11_16_10_2_7_4 MATURE 50 3.50 37 3.53 13 3.39 19
.......GGAGAGAAAGGCAGTTCCTGAat.................................... read_345268_10_11_2_1_3_6 MATURE 33 2.31 23 2.20 10 2.61 at 21
.......GGAGAGAAAGGCAGTTCCTGAaa.................................... read_125098_9_10_2_1_2_2 MATURE 26 1.82 21 2.01 5 1.31 aa 21
.......GGAGAGAAAGGCAGTTCCTGATt.................................... read_142298_6_3_2_1_1_2 MATURE 15 1.05 11 1.05 4 1.04 t 22
.......GGAGAGAAAGGCAGTTCCTGtt..................................... read_372913_3_3_4_2_1_1 MATURE 14 0.98 10 0.96 4 1.04 tt 20
.......GGAGAGAAAGGCAGcTCCTGA...................................... read_222969_8_0_1_0_0_2 MATURE 11 0.77 9 0.86 2 0.52 14C6
.......GGAGAGAAAGGCAGTTCCTGtat.................................... read_139478_3_4_2_0_1_0 MATURE 10 0.70 9 0.86 1 0.26 tat 20
.......GGAGAGAAAGGCAGTTtCTGA...................................... read_335277_1_2_2_0_2_2 MATURE 9 0.63 5 0.48 4 1.04 16T4
.......GGAGAGAAAGGCAGTTCCTGtaa.................................... read_51879_4_1_4_0_0_0 MATURE 9 0.63 9 0.86 0 0.00 taa 20
.......GGAGAGAAAGGCAGTTCCTGc...................................... read_57770_2_2_2_1_0_2 MATURE 9 0.63 6 0.57 3 0.78 c 20
.......GGAGAGAAAGGCAGTTCCTa....................................... read_328770_3_2_2_1_0_1 MATURE 9 0.63 7 0.67 2 0.52 a 19
.......GGAGAGAAAGGCAGTTCC......................................... read_152659_4_2_0_1_1_0 MATURE 8 0.56 6 0.57 2 0.52 18
.......GGAGAGAAAGGCAGTTCCTat...................................... read_41226_4_4_0_0_0_0 MATURE 8 0.56 8 0.76 0 0.00 at 19
.......GGAGAGAAAGGCAGTTCCTt....................................... read_175208_1_3_0_1_1_1 MATURE 7 0.49 4 0.38 3 0.78 t 19
.......GGAGAGAAAGGCAGTTCCTtt...................................... read_128650_2_0_0_1_1_3 MATURE 7 0.49 2 0.19 5 1.31 tt 19
.......GGAGAGAAAGGCAGTTCCTGAg..................................... read_391538_4_2_0_0_0_1 MATURE 7 0.49 6 0.57 1 0.26 g 21
.......GGAGAGAAAGGCAGTTCCTGttt.................................... read_345178_1_4_1_0_1_0 MATURE 7 0.49 6 0.57 1 0.26 ttt 20
.......GGAGAGAAAGGCAGTTCCTGAgt.................................... read_301845_2_1_2_0_0_1 MATURE 6 0.42 5 0.48 1 0.26 gt 21
.......GGAGAGAAAGGCAGTTCCTta...................................... read_191431_1_3_1_0_0_1 MATURE 6 0.42 5 0.48 1 0.26 ta 19
.......GGAGAGAAAGGCAGTTCCTaa...................................... read_12003_0_3_1_0_0_1 MATURE 5 0.35 4 0.38 1 0.26 aa 19
.......GGAGAGAAAGGCAGTTCCTGta..................................... read_231221_2_1_1_1_0_0 MATURE 5 0.35 4 0.38 1 0.26 ta 20
.......GGAGAGAAAGGCAGTTCCTGATa.................................... read_43229_1_1_2_0_0_0 MATURE 4 0.28 4 0.38 0 0.00 a 22
..........GAGAAAGGCAGTTCCTGA...................................... read_407191_0_1_1_1_1_0 MATURE 4 0.28 2 0.19 2 0.52 18
.......GGAGAGAAAGGCAGTTCCcGA...................................... read_100596_1_0_0_0_1_1 MATURE 3 0.21 1 0.10 2 0.52 18C2
.......GGAGAGAAAGGCAGTTCCTGAag.................................... read_87211_1_2_0_0_0_0 MATURE 3 0.21 3 0.29 0 0.00 ag 21
.......GGAGAGAAAGGCAGTTC.......................................... read_384130_2_0_0_0_0_1 MATURE 3 0.21 2 0.19 1 0.26 17
.......GGAGAGAAAGGCAGTTCCa........................................ read_333491_1_0_1_1_0_0 MATURE 3 0.21 2 0.19 1 0.26 a 18
..........GAGAAAGGCAGTTCCTGAaa.................................... read_292698_0_0_0_1_2_0 MATURE 3 0.21 0 0.00 3 0.78 aa 18
.......GGAGAGAAAGGCAGTTCCTGtaaa................................... read_194217_1_0_0_1_0_1 MATURE 3 0.21 1 0.10 2 0.52 taaa 20
.......GGAGAGAAAGGCAGTTtCTGAa..................................... read_15710_0_0_2_0_1_0 MATURE 3 0.21 2 0.19 1 0.26 a 16T4
.......GGAGAGAAAGGCAGTTCCTGAaaa................................... read_218178_1_0_0_0_1_1 MATURE 3 0.21 1 0.10 2 0.52 aaa 21
.......GGAGAGAAAGGCAGTTtCTGAaa.................................... read_187259_0_2_0_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 aa 16T4
.......GGAGAGAAAGGCAGTTCCTGg...................................... read_389108_0_0_2_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 g 20
.......GGAGAGAAAGGCAGcTCCTGAT..................................... read_971_1_1_0_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 14C7
.......GGAGAGAAAGGCAGaTCCTGAT..................................... read_173831_2_0_0_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 14A7
.......GGAGAGcAAGGCAGTTCCTGA...................................... read_236813_0_1_1_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 6C14
.......GGAGAGAAAGGCAGTTCCTGAc..................................... read_90191_1_1_0_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 c 21
.......GGAGAGAAAGGCAGTTCCTcaa..................................... read_255515_0_0_0_0_2_0 MATURE 2 0.14 0 0.00 2 0.52 caa 19
.......GGAGAGAAAGGCAGTTCCTGct..................................... read_369683_0_0_2_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 ct 20
.......GGAGAGAAAGGCAaTTCCTGA...................................... read_85465_0_1_0_0_1_0 MATURE 2 0.14 1 0.10 1 0.26 13A7
.......GGAGAGAAAGGCAGTTCCTGtag.................................... read_378296_0_0_2_0_0_0 MATURE 2 0.14 2 0.19 0 0.00 tag 20
.......GGAGAGAAAGGCAGTTCCTGATtt................................... read_113489_0_0_1_0_0_1 MATURE 2 0.14 1 0.10 1 0.26 tt 22
.......GGAGgGAAAGGCAGTTCCTGA...................................... read_285962_0_0_1_0_0_1 MATURE 2 0.14 1 0.10 1 0.26 4G16
.......GGAGAGAAAGGCAGTTaCTGAT..................................... read_149366_1_0_0_0_0_1 MATURE 2 0.14 1 0.10 1 0.26 16A5
.......GGAGAGAAAGGCAGTTCtTGAa..................................... read_193084_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 a 17T3
.......GGAGAGAAAGGCAGTTtCTGAT..................................... read_88430_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 16T5
.......GGAGAGAAAGGCAGTTCCTtAT..................................... read_192222_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 19T2
.......GGAGAGAAAGGCAGTTCCTtca..................................... read_154231_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 tca 19
.......GGAGAGAAAGGCAGTTCCTGATaa................................... read_318836_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 aa 22
.........gGAGAAAGGCAGTTCCTGA...................................... read_280237_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 18
.......GGAGAGAAAGGCAGTTCtTGA...................................... read_246802_0_0_0_1_0_0 MATURE 1 0.07 0 0.00 1 0.26 17T3
.......GGAGAGAAAGGCAGTTCCTGttat................................... read_274412_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ttat 20
.......GGAGAGAAAGGCAGTTtCTGAat.................................... read_319908_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 at 16T4
..........GAGAAAGGCAGTTCCTGAa..................................... read_144634_0_0_0_0_1_0 MATURE 1 0.07 0 0.00 1 0.26 a 18
.......GGAGAGAAAGGCAGTTCgTGA...................................... read_174094_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 17G3
.......GGAGAGAAAGGCAGTTCCcGAag.................................... read_177902_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ag 18C2
.......GGAGAGAAAGGCtGTTCCTGA...................................... read_171023_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 12T8
.......tGAGAGAAAGGCAGTTCCT........................................ read_44943_0_0_0_0_1_0 MATURE 1 0.07 0 0.00 1 0.26 18
.......GGgGAGAAAGGCAGTTCCTGA...................................... read_322846_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 2G18
.......GGAGAGAAAGGCAGTTCCTGAga.................................... read_16000_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ga 21
.......GGAGAGAAAaGCAGTTCCTGA...................................... read_327538_0_0_0_1_0_0 MATURE 1 0.07 0 0.00 1 0.26 9A11
.......tGAGAGAAAGGCAGTTCCTG....................................... read_177654_0_0_0_1_0_0 MATURE 1 0.07 0 0.00 1 0.26 19
.......GGAGAGAAAGGCAGTTCtTGAT..................................... read_305413_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 17T4
.......GGAGAGAAAGGCAGcTCCTGAa..................................... read_247050_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 a 14C6
.......GGAGAGAAAGGCAGTTCCTGATG.................................... read_184632_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 23
.......GGAGAGAAAGGCAGTTCCTGgat.................................... read_22430_0_0_0_0_1_0 MATURE 1 0.07 0 0.00 1 0.26 gat 20
.........AGAGAAAGGCAGTTCCTGA...................................... read_336610_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 19
.......GGAGAGAAAGGCAGTTCCcgc...................................... read_363397_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 cgc 18
.......GGAGAGAAAGGCAGTTCCTGtaat................................... read_261286_0_0_0_0_0_1 MATURE 1 0.07 0 0.00 1 0.26 taat 20
.......GGAGAGAAAGGCAGTTCCTGgg..................................... read_2644_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 gg 20
.......GGAGgGAAAGGCAGTTCCTGAat.................................... read_356389_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 at 4G16
.......GGAGAGAAAGGCAGTTCCTGAaga................................... read_210575_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 aga 21
.......GGAGAGAAAGGCAGTTCCTttt..................................... read_289106_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ttt 19
.......GGAGAGAAAGGCAGTTCCTGca..................................... read_175685_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ca 20
.......GGAGAGAAAGGCAGTTCCTGATta................................... read_401719_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ta 22
.......GGAGAGAAAGGCAGTTCCTGtac.................................... read_243172_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 tac 20
.......GGAGAGAAAGGCAGTTCCcGAat.................................... read_213933_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 at 18C2
.......GGAGAGAAAGGCAGTTCCTGAaaca.................................. read_111187_0_0_0_0_1_0 MATURE 1 0.07 0 0.00 1 0.26 aaca 21
.......GGAGAGAAAGGCAGTTCCTGttc.................................... read_396538_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ttc 20
.......GGAGAGAAAGGCAGTTCaTGA...................................... read_251187_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 17A3
.......GGAGAGAAAtGCAGTTCCTGA...................................... read_291397_0_0_0_0_1_0 MATURE 1 0.07 0 0.00 1 0.26 9T11
.......GGAGAGAAAGGCAGTTCCTGAata................................... read_33454_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ata 21
.......GGAcAGAAAGGCAGTTCCTGAT..................................... read_95508_0_0_0_0_0_1 MATURE 1 0.07 0 0.00 1 0.26 3C18
.......GGAGgGAAAGGCAGTTCCTGAa..................................... read_241841_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 a 4G16
.......GGAGAGAAAGGCAGTTCCTag...................................... read_212870_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ag 19
.......GGAGAGAAAGGCAGTTCCTGAac.................................... read_161016_0_0_0_0_1_0 MATURE 1 0.07 0 0.00 1 0.26 ac 21
.......GGAGAGAAAGGCAGTTCCTtta..................................... read_236429_0_0_0_0_0_1 MATURE 1 0.07 0 0.00 1 0.26 tta 19
.......GGAGAGAAAGGCAGTTCCTata..................................... read_332066_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ata 19
.......GGAGAGAAAGGCAGTTCCTGAagt................................... read_87810_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 agt 21
.......GGAGAGAAAGGCgGTTCCTG....................................... read_282174_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 12G7
.......GGAGAGAAAGGCAGTTCCTGga..................................... read_9571_0_1_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 ga 20
.......GGAGtGAAAGGCAGTTCCTGA...................................... read_286044_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 4T16
.......GGAGAGAAAGGCAGTTCCg........................................ read_29949_0_0_0_1_0_0 MATURE 1 0.07 0 0.00 1 0.26 g 18
.......GGAGAGAAAGGCAGcTCCTGAat.................................... read_352080_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 at 14C6
.......GGAGAGAAAGGCAGTTCCTtaaa.................................... read_318160_0_0_0_0_0_1 MATURE 1 0.07 0 0.00 1 0.26 taaa 19
........GAGAGAAAGGCAGTTCCTatt..................................... read_105015_1_0_0_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 att 18
.......GGAGAGAAAGGCAGTTaCTGATt.................................... read_105713_0_0_1_0_0_0 MATURE 1 0.07 1 0.10 0 0.00 t 16A5
---------- ---------- ----------
1430 1047 383
(73.22) (26.78)
*** OTHER ***
_________________________________________________________________
AGGGATTGGAGAGAAAGGCAGTTCCTGATGGTCCCCTCCCAGGGGCTGGCTTTCCTCTGGTCCTT REF 16 18327494 - 18327558
TGGAGAGAAAGGCAGTTCCTGA MATURE 16 18327501 - 18327586 mmu-miR-185 -
_________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.........................................GGGGCTGGCTTTCCTCTGGT..... read_105712_1_0_1_1_0_0 OTHER 3 50.00 2 50.00 1 50.00 20
.........................................GGGGCTGGCTTTCCTCTGG...... read_378623_2_0_0_0_0_0 OTHER 2 33.33 2 50.00 0 0.00 19
.........................................GGGGCTGGCTTTCCTCT........ read_42768_0_0_0_1_0_0 OTHER 1 16.67 0 0.00 1 50.00 17
---------- ---------- ----------
6 4 2
(66.67) (33.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1047 383 1430 99.58%
OTHER 4 2 6 0.42%
---------- ---------- ----------
1051 385 1436
[END]