[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************
ID : mmu-mir-183
DESCRIPTION : mmu-mir-183 MI0000225 Mus musculus miR-183 stem-loop
CHROMOSOME : 6
SPAN : 30119668 - 30119737
LENGTH : 70
SEQUENCE : CTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAG
OVERHANG THRESHOLD : 75%
*******************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-183
ACCID : MI0000225
PARENT : mmu-mir-183
CHROMOSOME : 6
START : 30119668
STOP : 30119737
OFFSET : 6..27
SEQUENCE : TATGGCACTGGTAGAATTCACT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-183*
ACCID : MI0000225
PARENT : mmu-mir-183
CHROMOSOME : 6
START : 30119668
STOP : 30119737
OFFSET : 45..66
SEQUENCE : GTGAATTACCGAAGGGCCATAA
STRAND : -
******************************
*** MATURE ***
______________________________________________________________________
CTGTGTATGGCACTGGTAGAATTCACTGTGAACAGTCTCAGTCAGTGAATTACCGAAGGGCCATAAACAG REF 6 30119668 - 30119737
TATGGCACTGGTAGAATTCACT MATURE 6 30119674 - 30119764 mmu-miR-183 -
GTGAATTACCGAAGGGCCATAA MATURESTAR 6 30119713 - 30119803 mmu-miR-183* -
______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......ATGGCACTGGTAGAATTCACT............................................ read_193689_0_1_2_1_2_2 MATURE 8 57.14 3 75.00 5 50.00 21
......ATGGCACTGGTAGAATTCACTG........................................... read_194732_0_0_0_1_1_2 MATURE 4 28.57 0 0.00 4 40.00 22
......ATGGCACTGGTAGAATTCACTGT.......................................... read_241337_1_0_0_0_0_0 MATURE 1 7.14 1 25.00 0 0.00 23
......ATGGCACTGGTAGgATTCACT............................................ read_60031_0_0_0_0_0_1 MATURE 1 7.14 0 0.00 1 10.00 13G7
---------- ---------- ----------
14 4 10
(28.57) (71.43)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 4 10 14 100.00%
---------- ---------- ----------
4 10 14
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