[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************
ID : mmu-mir-181d
DESCRIPTION : mmu-mir-181d MI0005450 Mus musculus miR-181d stem-loop
CHROMOSOME : 8
SPAN : 86702615 - 86702686
LENGTH : 72
SEQUENCE : ACAATTAACATTCATTGTTGTCGGTGGGTTGTGAGGAGGCAGCCAGACCCACCGGGGGATGAATGTCACTGT
OVERHANG THRESHOLD : 75%
*********************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-181d
ACCID : MI0005450
PARENT : mmu-mir-181d
CHROMOSOME : 8
START : 86702615
STOP : 86702686
OFFSET : 7..29
SEQUENCE : AACATTCATTGTTGTCGGTGGGT
STRAND : -
******************************
*** MATURE ***
________________________________________________________________________
ACAATTAACATTCATTGTTGTCGGTGGGTTGTGAGGAGGCAGCCAGACCCACCGGGGGATGAATGTCACTGT REF 8 86702615 - 86702686
AACATTCATTGTTGTCGGTGGGT MATURE 8 86702622 - 86702715 mmu-miR-181d -
________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......ACATTCATTGTTGTCGGTGGGT............................................ read_234339_110_131_99_17_24_37 MATURE 418 43.23 340 43.65 78 41.49 22
.......ACATTCATTGTTGTCGGTGGGTT........................................... read_36954_32_64_39_10_14_9 MATURE 168 17.37 135 17.33 33 17.55 23
.......ACATTCATTGTTGTCGGTGGG............................................. read_321036_25_20_21_5_6_6 MATURE 83 8.58 66 8.47 17 9.04 21
.......ACATTCATTGTTGTCGGTGG.............................................. read_252327_10_14_5_1_2_4 MATURE 36 3.72 29 3.72 7 3.72 20
.......ACATTCATTGTTGTCGGTGGGTTt.......................................... read_402379_2_11_11_1_5_5 MATURE 35 3.62 24 3.08 11 5.85 t 23
.......ACATTCATTGTTGTCGGTGGGa............................................ read_46665_9_11_8_1_2_0 MATURE 31 3.21 28 3.59 3 1.60 a 21
.......ACATTCATTGTTGTCGGTGGGTa........................................... read_161161_3_5_4_0_1_0 MATURE 13 1.34 12 1.54 1 0.53 a 22
.......ACATTCATTGTTGTCGtTGGGT............................................ read_197367_2_3_3_2_1_0 MATURE 11 1.14 8 1.03 3 1.60 16T5
.......ACATTCATTGTTGTaGGTGGGT............................................ read_45983_8_0_1_0_0_0 MATURE 9 0.93 9 1.16 0 0.00 14A7
.......ACATTCATTGTTGTCGGT................................................ read_117549_1_2_0_1_1_4 MATURE 9 0.93 3 0.39 6 3.19 18
.......ACATTCATTGTTGTCGGTGGGTat.......................................... read_301074_4_2_2_0_0_0 MATURE 8 0.83 8 1.03 0 0.00 at 22
.......ACATTCATTGTTtTCGGTGGGT............................................ read_263673_0_2_3_0_1_1 MATURE 7 0.72 5 0.64 2 1.06 12T9
.......ACATTCATTGTTGTCGGTGGa............................................. read_100730_0_2_3_0_0_1 MATURE 6 0.62 5 0.64 1 0.53 a 20
.......ACATTCATTGTTGTCGGTGGtt............................................ read_372611_2_3_1_0_0_0 MATURE 6 0.62 6 0.77 0 0.00 tt 20
.......ACATTCATTGTTGTCGGTGtGT............................................ read_29571_1_3_1_0_0_0 MATURE 5 0.52 5 0.64 0 0.00 19T2
.......ACATTCATTGTTGTCGGTGt.............................................. read_186049_2_1_1_0_1_0 MATURE 5 0.52 4 0.51 1 0.53 t 19
.......ACATTCATTGTTGTCGGTGGGTaa.......................................... read_323109_0_1_2_0_1_0 MATURE 4 0.41 3 0.39 1 0.53 aa 22
.......ACATTCATTGTTGTCGGTGtGTT........................................... read_31634_0_0_2_2_0_0 MATURE 4 0.41 2 0.26 2 1.06 19T3
.......ACATTCATTGTTtTCGGTGGGTT........................................... read_6681_2_0_0_0_0_2 MATURE 4 0.41 2 0.26 2 1.06 12T10
.......ACATTCATTGTTGTCGGTGGGc............................................ read_273427_3_0_1_0_0_0 MATURE 4 0.41 4 0.51 0 0.00 c 21
.......ACATTCATTGTTGTCGGTGGtTT........................................... read_203805_0_0_2_0_1_1 MATURE 4 0.41 2 0.26 2 1.06 20T2
.......ACATTCATTGTTGTCGGTGGGTTa.......................................... read_398571_1_1_1_0_0_1 MATURE 4 0.41 3 0.39 1 0.53 a 23
.......ACATTCATTGTTGTCGGTGGGTTG.......................................... read_409228_1_1_1_0_0_0 MATURE 3 0.31 3 0.39 0 0.00 24
.......ACATTCATTGTTGTCtGTGGGT............................................ read_30999_0_0_3_0_0_0 MATURE 3 0.31 3 0.39 0 0.00 15T6
.......ACATTCATTGTTGTCGGTtGGT............................................ read_162142_1_0_2_0_0_0 MATURE 3 0.31 3 0.39 0 0.00 18T3
.......ACATTCATTGTTGTCGGTtGGTT........................................... read_203440_0_2_1_0_0_0 MATURE 3 0.31 3 0.39 0 0.00 18T4
.......ACATTCATTGTTGTCGcTGGGT............................................ read_237922_2_0_0_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 16C5
.......ACATTCATTGTTGTCGGTGGGaa........................................... read_223698_2_0_0_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 aa 21
.......ACATTCATTGTTGTaGGTGG.............................................. read_264544_2_0_0_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 14A5
.......ACATTCATTGTTGTCGGTGa.............................................. read_75505_1_0_1_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 a 19
.......ACATTCATTGTTGTCGGTGGGat........................................... read_360241_1_0_1_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 at 21
.......ACATTCATTGTTGTaGGTGGG............................................. read_295102_1_0_1_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 14A6
.......ACATTCATTGTTGTCGGTGGaa............................................ read_243886_1_0_1_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 aa 20
......AACATTCATTGTTGTCGGTGG.............................................. read_180168_1_0_0_1_0_0 MATURE 2 0.21 1 0.13 1 0.53 21
.......ACATTCATTGTTGTCGGTGGt............................................. read_337555_1_1_0_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 t 20
.......ACATTCATTGTTGTCGGTG............................................... read_303324_1_0_0_0_0_1 MATURE 2 0.21 1 0.13 1 0.53 19
.......ACATTCATTGTTGTCGGTtg.............................................. read_337618_0_0_1_0_1_0 MATURE 2 0.21 1 0.13 1 0.53 tg 18
.......ACATTCATTGTTtTCGGTGGGTTt.......................................... read_193396_0_1_0_1_0_0 MATURE 2 0.21 1 0.13 1 0.53 t 12T10
.......ACATTCATTGTTGTCGGTGtg............................................. read_170291_1_1_0_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 tg 19
.......ACATTCATTGTTGTCGGTGGtTTt.......................................... read_116525_1_0_1_0_0_0 MATURE 2 0.21 2 0.26 0 0.00 t 20T2
.......ACATTCATTGTTGaCGGTGG.............................................. read_350747_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 13A6
.......cCATTCATTGTTGTCGGTGGGT............................................ read_316668_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 21
.......ACATTCATTGTTGTCGGaGGGa............................................ read_177354_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 a 17A3
.......ACATTCATTGTTGTCGGTGGGTaat......................................... read_374139_0_0_0_0_1_0 MATURE 1 0.10 0 0.00 1 0.53 aat 22
.......ACATTCATTGgTGTCGGTGGGT............................................ read_326481_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 10G11
.......ACATTCATTGTTGTCGtTGGGTT........................................... read_170706_0_0_0_1_0_0 MATURE 1 0.10 0 0.00 1 0.53 16T6
.......ACATTCATTGTTGTCGGgGGGTTt.......................................... read_198315_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 t 17G5
.......ACATTCATTGTTGaCGGTGGGT............................................ read_8424_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 13A8
........CATTCATTGTTGTCGGTGGG............................................. read_196847_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 20
.......ACATTCATTGTTGTaGGTGGGTa........................................... read_42478_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 a 14A7
.......ACATTCATTGTTGTCGGTtGG............................................. read_381313_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 18T2
.......ACATTCATTGTTGTCGGTGGGaaa.......................................... read_334718_0_0_0_0_0_1 MATURE 1 0.10 0 0.00 1 0.53 aaa 21
.......ACATTCATTGTTGTCGGTGGGTTtt......................................... read_16996_0_0_0_1_0_0 MATURE 1 0.10 0 0.00 1 0.53 tt 23
.......ACATTCATTGTTGTCGGTGGaat........................................... read_282901_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 aat 20
.......ACATTCATTGTTGTCGGgGGGT............................................ read_302395_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 17G4
.......ACATTCtTTGTTGTCGGTGGGT............................................ read_218245_0_0_0_0_0_1 MATURE 1 0.10 0 0.00 1 0.53 6T15
.......ACATTCATTGTTGTCGGTGGGTg........................................... read_196060_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 g 22
...........TCATTGTTGTCGGTGGGTT........................................... read_390013_0_0_0_0_1_0 MATURE 1 0.10 0 0.00 1 0.53 19
.......ACATcCATTGTTGTCGGTGGGT............................................ read_321282_0_0_0_0_1_0 MATURE 1 0.10 0 0.00 1 0.53 4C17
.......ACATTCATTGTTGTCGGTGtgat........................................... read_342435_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 tgat 19
.......ACATTCATTGTTGTCGGTGtGTat.......................................... read_395313_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 at 19T2
.......ACATTCATTGTTGTCcGTGGGTT........................................... read_239173_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 15C7
.......ACATTCATTGTTtTCGGTGGGTa........................................... read_132851_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 a 12T9
.......ACATTCATTGTTGTCtGTGGGa............................................ read_21066_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 a 15T5
.......ACATTCATTGTTGTCGGTttg............................................. read_218660_0_0_0_0_1_0 MATURE 1 0.10 0 0.00 1 0.53 ttg 18
.......ACATTCATTGTTGTCGGgGG.............................................. read_265183_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 17G2
.......ACATTaATTGTTGTCGGTGGGT............................................ read_30409_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 5A16
.......ACATTCATTGTTaTCGGTGGGT............................................ read_409703_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 12A9
.......ACATTCATTGTTGcCGGTGG.............................................. read_159967_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 13C6
.......gCATTCATTGTTGTCGGTGGa............................................. read_48741_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 a 19
.......gCATTCATTGTTGTCGGTGGGTTt.......................................... read_363990_0_0_0_0_0_1 MATURE 1 0.10 0 0.00 1 0.53 t 22
.......ACATTCATTGTcGTCGGTGGGT............................................ read_293382_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 11C10
.......ACATTCATTGTTGTCGGTGcta............................................ read_258234_0_0_0_0_0_1 MATURE 1 0.10 0 0.00 1 0.53 cta 19
.......ACATTCATTGTTGTCGaTGGGT............................................ read_122994_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 16A5
.......ACATTaATTGTTGTCGGTGG.............................................. read_5313_0_0_0_0_0_1 MATURE 1 0.10 0 0.00 1 0.53 5A14
.......ACATTCATTGTTGTCGGTGGGg............................................ read_9539_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 g 21
.......ACATTCATTGTTGTCGGaGGGT............................................ read_402400_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 17A4
.......ACATTCATTGTTGTCGGcGGGT............................................ read_287817_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 17C4
......AACATTCATTGTTGTCGGTGGGT............................................ read_128148_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 23
.......ACATTCgTTGTTGTCGGTGGGa............................................ read_25481_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 a 6G14
.......gCATTCATTGTTGTCGGTGGGTT........................................... read_188972_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 22
.......ACATTCATTcTTGTCGGTGGGTTt.......................................... read_278687_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 t 9C13
.......ACAcTCATTGTTGTCGGTGGG............................................. read_76412_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 3C17
.......ACATTCgTTGTTGTCGGTGGGTT........................................... read_334964_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 6G16
.......ACATTCATTGTTGTtGGTGGGT............................................ read_401579_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 14T7
......AACATTCATTGTTtTCGGTGGGT............................................ read_41518_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 13T9
.......gCATTCATTGTTGTCGGTGGGT............................................ read_330473_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 21
.......ACATTCATTGTTGTCGGgGGGTT........................................... read_56289_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 17G5
.......ACATTCATTGTTGTaGGTGGGTT........................................... read_314252_1_0_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 14A8
.......ACATTCATTGTTGTCGGaGGGTT........................................... read_335949_0_1_0_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 17A5
.......ACATTCATTGTTGTCGGTttt............................................. read_306692_0_0_1_0_0_0 MATURE 1 0.10 1 0.13 0 0.00 ttt 18
.......ACATTCATgGTTGTCGGTGGG............................................. read_350365_0_0_0_0_1_0 MATURE 1 0.10 0 0.00 1 0.53 8G12
.......ACATTCATTGTTGTCGGcGGGa............................................ read_232041_0_0_0_0_0_1 MATURE 1 0.10 0 0.00 1 0.53 a 17C3
---------- ---------- ----------
967 779 188
(80.56) (19.44)
*** OTHER ***
________________________________________________________________________
ACAATTAACATTCATTGTTGTCGGTGGGTTGTGAGGAGGCAGCCAGACCCACCGGGGGATGAATGTCACTGT REF 8 86702615 - 86702686
AACATTCATTGTTGTCGGTGGGT MATURE 8 86702622 - 86702715 mmu-miR-181d -
________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................CACCGGGGGATGAATGTCAt.... read_275245_0_0_1_0_0_0 OTHER 1 50.00 1 50.00 0 0 t 19
.................................................CACCGGGGGATGAATGTCA..... read_357340_1_0_0_0_0_0 OTHER 1 50.00 1 50.00 0 0 19
---------- ---------- ----------
2 2 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 779 188 967 99.79%
OTHER 2 0 2 0.21%
---------- ---------- ----------
781 188 969
[END]