[BEGIN]
REFERENCE HAIRPIN
*****************************************************************************************************
ID : mmu-mir-181b-1
DESCRIPTION : mmu-mir-181b-1 MI0000723 Mus musculus miR-181b-1 stem-loop
CHROMOSOME : 1
SPAN : 139863216 - 139863295
LENGTH : 80
SEQUENCE : AGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTAGAAAAGCTCACTGAACAATGAATGCAACTGTGGCC
OVERHANG THRESHOLD : 75%
*****************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-181b
ACCID : MI0000723
PARENT : mmu-mir-181b-1
CHROMOSOME : 1
START : 139863216
STOP : 139863295
OFFSET : 12..34
SEQUENCE : AACATTCATTGCTGTCGGTGGGT
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________
AGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTAGAAAAGCTCACTGAACAATGAATGCAACTGTGGCC REF 1 139863216 - 139863295
AACATTCATTGCTGTCGGTGGGT MATURE 1 139863228 - 139863329 mmu-miR-181b +
________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............ACATTCATTGCTGTCGGTGGGT............................................... read_249529_10_12_12_2_3_0 MATURE 39 26.90 34 28.10 5 20.83 22
............ACATTCATTGCTGTCGGTGG................................................. read_250911_8_8_4_0_3_0 MATURE 23 15.86 20 16.53 3 12.50 20
............ACATTCATTGCTGTCGGTGGGTT.............................................. read_369857_5_7_5_2_1_1 MATURE 21 14.48 17 14.05 4 16.67 23
............ACATTCATTGCTGTCGGTGGG................................................ read_107069_4_5_6_0_1_1 MATURE 17 11.72 15 12.40 2 8.33 21
............ACATTCATTGCTGTCGGT................................................... read_14921_0_1_0_3_0_3 MATURE 7 4.83 1 0.83 6 25.00 18
............ACATTCATTGCTGTCGGTGGGa............................................... read_282650_0_5_1_0_0_0 MATURE 6 4.14 6 4.96 0 0.00 a 21
............ACATTCATTGCTGTCGG.................................................... read_146449_0_0_0_0_1_2 MATURE 3 2.07 0 0.00 3 12.50 17
............ACATTCATTGCTGTCGGTGt................................................. read_367132_0_1_2_0_0_0 MATURE 3 2.07 3 2.48 0 0.00 t 19
............ACATTCATTGCTGTCGGTGGa................................................ read_302092_1_1_0_0_0_0 MATURE 2 1.38 2 1.65 0 0.00 a 20
............ACATTCATTGCTGTCGGTG.................................................. read_31101_1_0_1_0_0_0 MATURE 2 1.38 2 1.65 0 0.00 19
............ACATTCATTGCTGTCGGTGGtg............................................... read_67220_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 tg 20
............ACATTCATTGCTGaCGGTGGGaa.............................................. read_55483_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 aa 13A7
............ACATTCATTGCTcTCGGTGGGTT.............................................. read_221170_0_1_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 12C10
............ACATTCATTGCTGTCGGaGGGTT.............................................. read_214522_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 17A5
............ACATTCATTGCTGTCGGTGGGaa.............................................. read_260853_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 aa 21
............ACATTCATTGCTGTCGGgGG................................................. read_198647_0_1_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 17G2
............ACATTCATTGCTGTCGGTGGGca.............................................. read_101475_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 ca 21
............ACATTCATTGCTGTCtGTGGGT............................................... read_282026_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 15T6
............ACATTCAcTGCTGTCGGTGGGTT.............................................. read_341849_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 7C15
............ACATTCATTGCTGTCGGTGGtt............................................... read_251336_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 tt 20
............ACATTCATTGCTGTCGGTGGGTa.............................................. read_234792_0_1_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 a 22
............ACATTCATTGgTGTCGGTGGGT............................................... read_326481_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 10G11
............ACATTCATTGCTGTCGGTGGGga.............................................. read_175689_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 ga 21
............ACATTCATTGCTGTCGGTGGtat.............................................. read_228807_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 tat 20
............ACATTCATTGCTGTCGGTGGGg............................................... read_190577_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 g 21
............ACATTCATTGCTGTaGGTGGGT............................................... read_144505_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 14A7
............ACATTCATTGCTGTCGGTGGat............................................... read_145262_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 at 20
............ACATTCATTGCTGTCGtTGGG................................................ read_188623_1_0_0_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 16T4
............ACATTCATTGCTGTCGaTGGG................................................ read_379201_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 16A4
............ACATTCATTGCTGTCGtTGG................................................. read_214124_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 16T3
............ACATTCATTGCTGTCGGTtGGT............................................... read_123771_0_0_0_0_1_0 MATURE 1 0.69 0 0.00 1 4.17 18T3
............ACATTCATTGCTGTCGGTGGt................................................ read_132518_0_0_1_0_0_0 MATURE 1 0.69 1 0.83 0 0.00 t 20
---------- ---------- ----------
145 121 24
(83.45) (16.55)
*** OTHER ***
________________________________________________________________________________
AGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTAGAAAAGCTCACTGAACAATGAATGCAACTGTGGCC REF 1 139863216 - 139863295
AACATTCATTGCTGTCGGTGGGT MATURE 1 139863228 - 139863329 mmu-miR-181b +
________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
....................................................TCACTGAACAATGAATGCAA......... read_165774_1_0_0_0_0_0 OTHER 1 50.00 1 50.00 0 0 20
....................................................TCACTGAACAATGAATGCA.......... read_215402_0_1_0_0_0_0 OTHER 1 50.00 1 50.00 0 0 19
---------- ---------- ----------
2 2 0
(100.00) (0.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 121 24 145 98.64%
OTHER 2 0 2 1.36%
---------- ---------- ----------
123 24 147
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