[BEGIN]

REFERENCE HAIRPIN
************************************************************************************************************
ID                 : mmu-mir-181a-1
DESCRIPTION        : mmu-mir-181a-1 MI0000697 Mus musculus miR-181a-1 stem-loop
CHROMOSOME         : 1
SPAN               : 139863032 - 139863118
LENGTH             : 87
SEQUENCE           : GGTTGCTTCAGTGAACATTCAACGCTGTCGGTGAGTTTGGAATTCAAATAAAAACCATCGACCGTTGATTGTACCCTATAGCTAACC
OVERHANG THRESHOLD : 75%
************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-181a
ACCID      : MI0000697
PARENT     : mmu-mir-181a-1
CHROMOSOME : 1
START      : 139863032
STOP       : 139863118
OFFSET     : 14..36
SEQUENCE   : AACATTCAACGCTGTCGGTGAGT
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-181a-1*
ACCID      : MI0000697
PARENT     : mmu-mir-181a-1
CHROMOSOME : 1
START      : 139863032
STOP       : 139863118
OFFSET     : 54..75
SEQUENCE   : ACCATCGACCGTTGATTGTACC
STRAND     : +
******************************



*** MATURE ***
_______________________________________________________________________________________
GGTTGCTTCAGTGAACATTCAACGCTGTCGGTGAGTTTGGAATTCAAATAAAAACCATCGACCGTTGATTGTACCCTATAGCTAACC REF                  1                    139863032 - 139863118 
             AACATTCAACGCTGTCGGTGAGT                                                    MATURE               1                    139863046 - 139863154 mmu-miR-181a         +                    
                                                     ACCATCGACCGTTGATTGTACC             MATURESTAR           1                    139863086 - 139863193 mmu-miR-181a-1*      +                    
_______________________________________________________________________________________

                                                                                   -SEQ-                             -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
..............ACATTCAACGCTGTCGGTGAGT....................................................   read_296246_386_372_271_33_57_42       MATURE         1161        43.83         1029        45.63          132        33.50                        22   
..............ACATTCAACGCTGTCGGTGA......................................................     read_182010_97_123_75_25_27_24       MATURE          371        14.01          295        13.08           76        19.29                        20   
..............ACATTCAACGCTGTCGGTGAG.....................................................     read_53805_101_116_79_14_17_21       MATURE          348        13.14          296        13.13           52        13.20                        21   
..............ACATTCAACGCTGTCGGTGAGTT...................................................         read_133632_30_35_24_5_4_3       MATURE          101         3.81           89         3.95           12         3.05                        23   
..............ACATTCAACGCTGTCGGT........................................................        read_207163_12_16_10_13_8_9       MATURE           68         2.57           38         1.69           30         7.61                        18   
..............ACATTCAACGCTGTCGGTGAGa....................................................         read_407885_23_17_18_2_4_1       MATURE           65         2.45           58         2.57            7         1.78            a           21   
..............ACATTCAACGCTGTCGGTGt......................................................          read_240694_9_14_21_8_4_3       MATURE           59         2.23           44         1.95           15         3.81            t           19   
..............ACATTCAACGCTGTCGGTGgg.....................................................          read_311555_11_9_12_2_0_1       MATURE           35         1.32           32         1.42            3         0.76           gg           19   
..............ACATTCAACGCTGTCGGTGAa.....................................................          read_212871_12_10_5_2_3_2       MATURE           34         1.28           27         1.20            7         1.78            a           20   
..............ACATTCAACGCTGTCGGTG.......................................................            read_186701_5_7_2_4_1_3       MATURE           22         0.83           14         0.62            8         2.03                        19   
..............ACATTCAACGCTGTCGGTGtGT....................................................            read_263842_2_6_8_0_1_2       MATURE           19         0.72           16         0.71            3         0.76                      19T2   
..............ACATTCAACGCTGTCGGTGAGg....................................................            read_152356_3_6_3_1_0_1       MATURE           14         0.53           12         0.53            2         0.51            g           21   
..............ACATTCAACGCTGTaGGTGAGT....................................................           read_249146_12_1_1_0_0_0       MATURE           14         0.53           14         0.62            0         0.00                      14A7   
..............ACATTCAACGCTGTCGGTGgGT....................................................            read_326873_5_3_3_1_2_0       MATURE           14         0.53           11         0.49            3         0.76                      19G2   
..............ACATTCAACGCTGTCGGTGtg.....................................................             read_14253_2_4_7_0_1_0       MATURE           14         0.53           13         0.58            1         0.25           tg           19   
..............ACATTCAACGCTGTCGG.........................................................             read_91169_7_1_1_1_1_2       MATURE           13         0.49            9         0.40            4         1.02                        17   
..............ACATTCAACGCTGTCGGTGcg.....................................................              read_7376_4_7_1_0_0_0       MATURE           12         0.45           12         0.53            0         0.00           cg           19   
..............ACATTCAACGCTGTCGGTGc......................................................             read_12964_6_3_1_2_0_0       MATURE           12         0.45           10         0.44            2         0.51            c           19   
..............ACATTCAACGCTGTCGGTGAGTa...................................................            read_209056_2_5_2_1_0_0       MATURE           10         0.38            9         0.40            1         0.25            a           22   
..............ACATTCAACGCTGTCGGTGAt.....................................................            read_159452_2_4_3_0_0_0       MATURE            9         0.34            9         0.40            0         0.00            t           20   
..............ACATTCAACGCTGTCGGgGAG.....................................................             read_28183_2_2_5_0_0_0       MATURE            9         0.34            9         0.40            0         0.00                      17G3   
..............ACATTCAACGCTGTCGGgGAGT....................................................             read_59038_2_1_6_0_0_0       MATURE            9         0.34            9         0.40            0         0.00                      17G4   
..............ACATTCAACGCTGTCGGTGcGT....................................................            read_156633_3_2_2_1_0_0       MATURE            8         0.30            7         0.31            1         0.25                      19C2   
..............ACATTCAACGCTGTCGGTtAGT....................................................              read_4933_2_1_3_0_0_1       MATURE            7         0.26            6         0.27            1         0.25                      18T3   
..............ACATTCAACGCTGTCGGcGAGT....................................................            read_385578_2_3_2_0_0_0       MATURE            7         0.26            7         0.31            0         0.00                      17C4   
..............ACATTCAACGCTGTCGGTtAG.....................................................             read_83626_1_1_1_1_2_1       MATURE            7         0.26            3         0.13            4         1.02                      18T2   
..............ACATTCAACGCTGTCGtTGAGT....................................................            read_290096_3_2_2_0_0_0       MATURE            7         0.26            7         0.31            0         0.00                      16T5   
..............ACATTCAACGCTGTCGGTGAGc....................................................            read_175010_2_2_3_0_0_0       MATURE            7         0.26            7         0.31            0         0.00            c           21   
..............ACATTCAACGCTGTCGGTa.......................................................             read_50560_3_1_1_0_0_1       MATURE            6         0.23            5         0.22            1         0.25            a           18   
..............ACATTCAACGCTGTCGGTGAtt....................................................             read_32134_3_1_2_0_0_0       MATURE            6         0.23            6         0.27            0         0.00           tt           20   
..............ACATTCAACGCTGTCGGTGAat....................................................            read_253167_2_0_2_0_1_1       MATURE            6         0.23            4         0.18            2         0.51           at           20   
..............ACATTCAACGCTGTCGGTta......................................................            read_278509_2_1_1_0_0_1       MATURE            5         0.19            4         0.18            1         0.25           ta           18   
..............ACATTCAACGCTGTaGGTGAG.....................................................             read_38857_5_0_0_0_0_0       MATURE            5         0.19            5         0.22            0         0.00                      14A6   
..............ACATTCAACGCTGTCGGTGAaa....................................................            read_142130_2_1_1_0_0_1       MATURE            5         0.19            4         0.18            1         0.25           aa           20   
..............ACATTCAACGCTGTCGGcGAG.....................................................            read_243000_2_0_1_1_0_0       MATURE            4         0.15            3         0.13            1         0.25                      17C3   
..............ACATTCAACGCcGTCGGTGAGT....................................................             read_13963_0_2_1_1_0_0       MATURE            4         0.15            3         0.13            1         0.25                     11C10   
..............ACATTCAACGCTGcCGGTGAGT....................................................            read_323150_0_2_1_0_1_0       MATURE            4         0.15            3         0.13            1         0.25                      13C8   
..............ACATcCAACGCTGTCGGTGAGT....................................................            read_171295_1_1_1_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                      4C17   
..............ACATTCAACGtTGTCGGTGAG.....................................................            read_340587_0_2_1_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                     10T10   
..............ACATTCAACGCTGTCtGTGAGT....................................................            read_242387_0_0_3_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                      15T6   
..............cCATTCAACGCTGTCGGTGAGT....................................................             read_69158_2_1_0_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                        21   
..............ACATTCAACGCTGTCGGTGAGaa...................................................            read_337247_0_1_2_0_0_0       MATURE            3         0.11            3         0.13            0         0.00           aa           21   
..............ACATTCAACGCTGTCGGTt.......................................................            read_120912_1_1_0_1_0_0       MATURE            3         0.11            2         0.09            1         0.25            t           18   
..............ACATTCAACGCTGTaGGTGA......................................................            read_195790_3_0_0_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                      14A5   
..............ACATTCAACGCTGTgGGTGAGT....................................................            read_319784_3_0_0_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                      14G7   
..............ACATTCAACGCTGTCGcTGAGT....................................................            read_360075_0_1_2_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                      16C5   
..............ACATTCAACGCTGTCtGTGA......................................................            read_130562_1_1_1_0_0_0       MATURE            3         0.11            3         0.13            0         0.00                      15T4   
..............ACATTCAACGCTGTCGGTaa......................................................            read_294752_0_0_1_0_0_1       MATURE            2         0.08            1         0.04            1         0.25           aa           18   
..............ACATTCAACGCTGTCGtTGAG.....................................................             read_63676_1_0_0_0_0_1       MATURE            2         0.08            1         0.04            1         0.25                      16T4   
..............ACATTCAACGCTGTCGGTGAag....................................................            read_135295_1_1_0_0_0_0       MATURE            2         0.08            2         0.09            0         0.00           ag           20   
..................TCAACGCTGTCGGTGAGT....................................................            read_102972_2_0_0_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                        18   
..............ACATTCgACGCTGTCGGTGAGT....................................................            read_391969_0_1_0_0_1_0       MATURE            2         0.08            1         0.04            1         0.25                      6G15   
..............ACATTCAACGCTGTCGGTtt......................................................            read_147530_0_1_0_1_0_0       MATURE            2         0.08            1         0.04            1         0.25           tt           18   
..............ACATTCAACGCTGTCGGgGAGTT...................................................             read_71902_1_1_0_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                      17G5   
..............ACATTCAACGCTGTCGGTGg......................................................            read_370110_1_0_0_1_0_0       MATURE            2         0.08            1         0.04            1         0.25            g           19   
..............ACATTCAACGCTGcCGGTGA......................................................             read_78056_0_1_1_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                      13C6   
..............ACATTCAACGCTGTCGcTGA......................................................            read_215751_0_0_1_0_0_1       MATURE            2         0.08            1         0.04            1         0.25                      16C3   
..............ACATTCAACGCTGTCGGaGAGT....................................................            read_387117_0_0_2_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                      17A4   
....................AACGCTGTCGGTGAGTT...................................................             read_19095_1_0_0_1_0_0       MATURE            2         0.08            1         0.04            1         0.25                        17   
..............ACATTCAACGCTGcCGGTGAG.....................................................            read_262614_0_0_0_0_0_2       MATURE            2         0.08            0         0.00            2         0.51                      13C7   
................ATTCAACGCTGTCGGTGAG.....................................................            read_103167_1_0_0_0_1_0       MATURE            2         0.08            1         0.04            1         0.25                        19   
...............CATTCAACGCTGTCGGTGAGT....................................................            read_288556_0_1_0_1_0_0       MATURE            2         0.08            1         0.04            1         0.25                        21   
..............ACATTCAACGCTGTCGGTaAG.....................................................             read_42210_0_1_1_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                      18A2   
..............ACATTCAACGCTaTCGGTGAG.....................................................             read_59064_0_1_1_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                      12A8   
..............ACATTCAACGCTGTCGGTGAGTc...................................................            read_357671_1_1_0_0_0_0       MATURE            2         0.08            2         0.09            0         0.00            c           22   
..............ACATTCAgCGCTGTCGGTGAGT....................................................            read_375229_1_1_0_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                      7G14   
..............ACATTCAACGCTGaCGGTGAG.....................................................            read_114248_1_1_0_0_0_0       MATURE            2         0.08            2         0.09            0         0.00                      13A7   
..............ACATTCAACGCTGTCGGTttt.....................................................            read_173466_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          ttt           18   
...............CATTCAACGCTGTCGGTGAGg....................................................              read_3957_0_0_0_0_0_1       MATURE            1         0.04            0         0.00            1         0.25            g           20   
..............ACATTCAACGCTGTCGGTGtga....................................................            read_272478_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          tga           19   
..............ACATTCAACGCaGTCGGTGAGTT...................................................            read_169374_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                     11A11   
..............ACATTCAACaCTGTCGGTGAGT....................................................            read_239346_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      9A12   
..............ACATTCAACGCTaTCGGTGAGT....................................................            read_135485_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      12A9   
..............ACATTCtACGCTGTCGGTGAGT....................................................             read_88201_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      6T15   
..............ACATTCAACGCTGTCGaTGAGT....................................................            read_215476_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      16A5   
..............ACATTCAACGCTGTCGGTGtGTT...................................................             read_43460_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      19T3   
...............CATTCAACGCTGTCGGcGAGT....................................................            read_125408_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      16C4   
..............gCATTCAACGCTGTCGGTGAGTT...................................................            read_323803_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                        22   
..............gCATTCAACGCTGTCGGTGAG.....................................................            read_146594_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                        20   
..............ACATTCAACGCTGgCGGTGAGT....................................................            read_400530_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      13G8   
..............gCATTCAACGCTGTCGGTGAGT....................................................            read_365190_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                        21   
..............ACATTCAACGCTcTCGGTGAGTTT..................................................            read_298673_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                     12C11   
....................AACGCTGTCGGTGAGTTT..................................................            read_194164_0_0_0_0_1_0       MATURE            1         0.04            0         0.00            1         0.25                        18   
.............AACATTCAACGCTGTCGGTGAa.....................................................            read_132834_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            a           21   
...............CATTCAACGCTGTCGGTGAGTT...................................................            read_211804_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                        22   
..............ACATTCAACGCTGTCGGTGctg....................................................            read_401991_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          ctg           19   
..............ACATTCAACGCTGaCGGTGAGTT...................................................            read_206412_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      13A9   
..............ACATTgAACGCTGTCGGTGA......................................................            read_316144_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      5G14   
..............ACATTCAACGCTGTCGtTGAGTT...................................................            read_221012_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      16T6   
..............ACATTCAACGCTGTCGGTtct.....................................................            read_143128_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          tct           18   
..............ACATTCAACGCTGTCGGTtac.....................................................            read_370736_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          tac           18   
..............ACATTCAACGCTGTaGGTGAGa....................................................             read_72312_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            a         14A6   
..............ACATTCAACGCTGTCGGTtgg.....................................................            read_241135_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          tgg           18   
..............ACATTCAACGCTcTCGGTGAGTT...................................................            read_139920_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                     12C10   
..............ACATTCAACaCTGTCGGTGAGTT...................................................            read_370765_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      9A13   
..............ACATTCAACGCTGTCGGTGAc.....................................................            read_381681_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            c           20   
..............ACATTCAACGCTGTCGGTcAG.....................................................            read_284128_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      18C2   
..............ACATTCAACGCTGTtGGTGAGT....................................................             read_47109_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      14T7   
..............ACATTCAACGCTGTCGGTGAta....................................................            read_158480_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00           ta           20   
..............ACATTCAACGCTGTCGGTtta.....................................................             read_27258_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          tta           18   
...................CAACGCTGTCGGTGAGT....................................................            read_215251_0_0_0_0_0_1       MATURE            1         0.04            0         0.00            1         0.25                        17   
..............ACATTCAACGtTGTCGGTGAGT....................................................             read_50312_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                     10T11   
..............ACATTCAACGCTGTCGGTc.......................................................            read_164927_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            c           18   
..............ACATTCAACGCTGTCGGTGggg....................................................             read_52372_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          ggg           19   
..............ACATTCAACGCTGTaGGTGAGg....................................................            read_233131_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            g         14A6   
..............ACATTCAACGCTGTCaGTGAGTT...................................................            read_295480_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      15A7   
..............ACATTCcACGCTGTCGGTGAGT....................................................            read_180328_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      6C15   
..............ACATTCAACGCTGTCGGTagta....................................................            read_346284_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00         agta           18   
..............ACATTCAACGCTGTCGGTGAaca...................................................            read_236142_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          aca           20   
..............ACATTCAAaGCTGTCGGTGAGT....................................................            read_238577_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      8A13   
..............ACATTCAACGCTGTCtGTGAGTTT..................................................            read_310238_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      15T8   
..............ACATTCAACGCcGTCGGTGA......................................................            read_131172_0_0_0_0_1_0       MATURE            1         0.04            0         0.00            1         0.25                      11C8   
..............ACgTTCAACGCTGTCGGTGA......................................................            read_316104_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      2G17   
..............ACATTCAACGCgGTCGGTGAG.....................................................            read_275499_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      11G9   
..............ACATTCAACGaTGTCGGTGAGT....................................................            read_258226_0_0_0_0_0_1       MATURE            1         0.04            0         0.00            1         0.25                     10A11   
..............ACATTCAACGCTaTCGGTGAGTTT..................................................            read_153173_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                     12A11   
..............ACATTCAACGCTGTCGGTGgGTT...................................................            read_348889_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      19G3   
..............ACgTTCAACGCTGTCGGTGAGT....................................................             read_53350_0_0_0_0_0_1       MATURE            1         0.04            0         0.00            1         0.25                      2G19   
..............ACATTCAACGCTGcCGGTGAGTTT..................................................            read_214786_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                     13C10   
..............ACATTCAACtCTGTCGGTGAGT....................................................            read_115775_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      9T12   
..............ACATTCAACGCTGTCGGaGAG.....................................................            read_277142_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      17A3   
..............ACATTCAACGCTGTCGGTGAct....................................................            read_346939_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00           ct           20   
..............ACATTCAACGCTcTCGGTGAGT....................................................            read_313653_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      12C9   
..............ACATTCAtCGCTGTCGGTGAGT....................................................            read_201605_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      7T14   
..............ACAcTCAACGCTGTCGGTGAGT....................................................             read_22251_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      3C18   
..............ACATTaAACGCTGTCGGTGAGT....................................................            read_290112_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      5A16   
..............ACATTCAACGCTGTCGGTGAGat...................................................            read_410377_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00           at           21   
..............ACATTCAACGCTGTCGGTGcGTT...................................................             read_78599_0_0_0_0_1_0       MATURE            1         0.04            0         0.00            1         0.25                      19C3   
..............cCATTCAACGCTGTCGGTGAGa....................................................             read_11577_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            a           20   
..............ACATTCAACGCTtTCGGTGAGT....................................................             read_46566_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      12T9   
..............ACATTCAACGCTtTCGGTGAGa....................................................            read_250037_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            a         12T8   
..................TCAACGCTGTCGGTGAG.....................................................            read_289054_0_0_0_1_0_0       MATURE            1         0.04            0         0.00            1         0.25                        17   
..............ACATTCAACGCTGaCGGTGAGT....................................................             read_97140_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      13A8   
..............ACATTCAACGCTGTCGGTagt.....................................................            read_395392_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00          agt           18   
..............ACATTCAACGCTGTCGGgGAGgt...................................................            read_248451_0_0_0_1_0_0       MATURE            1         0.04            0         0.00            1         0.25           gt         17G3   
..............ACATTCAACGCTaTCGGTGA......................................................            read_314631_0_0_0_1_0_0       MATURE            1         0.04            0         0.00            1         0.25                      12A7   
..............ACATTCAgCGCTGTCGGTGAGg....................................................             read_23802_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            g         7G13   
..............ACATTCAACGCTGTgGGTGA......................................................            read_235795_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      14G5   
................ATTCAACGCTGTCGGTGAGT....................................................            read_265090_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                        20   
..............ACATTCAAtGCTGTCGGTGAGT....................................................            read_308456_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      8T13   
..............ACATTCAACGCTGTCGtTGA......................................................             read_74248_0_1_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      16T3   
..............ACATTCAACGCTGTCGGgGA......................................................            read_171011_0_0_1_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      17G2   
..............ACATTCAACGCTGTaGGTGAGTT...................................................             read_27716_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      14A8   
..............ACATTCAACGCTGgCGGTGAGTT...................................................            read_111518_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00                      13G9   
..............ACATTCAACtCTGTCGGTGAGc....................................................            read_192994_1_0_0_0_0_0       MATURE            1         0.04            1         0.04            0         0.00            c         9T11   
                                                                                                                                           ----------                ----------                ----------   
                                                                                                                                                 2649                      2255                       394                                          
                                                                                                                                                                        (85.13)                   (14.87)                                       




*** MATURESTAR ***
_______________________________________________________________________________________
GGTTGCTTCAGTGAACATTCAACGCTGTCGGTGAGTTTGGAATTCAAATAAAAACCATCGACCGTTGATTGTACCCTATAGCTAACC REF                  1                    139863032 - 139863118 
             AACATTCAACGCTGTCGGTGAGT                                                    MATURE               1                    139863046 - 139863154 mmu-miR-181a         +                    
                                                     ACCATCGACCGTTGATTGTACC             MATURESTAR           1                    139863086 - 139863193 mmu-miR-181a-1*      +                    
_______________________________________________________________________________________

                                                                                   -SEQ-                       -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
......................................................CCATCGACCGTTGATTGTAC..............       read_62710_5_1_3_2_1_2   MATURESTAR           14        34.15            9        31.03            5        41.67                        20   
......................................................CCATCGACCGTTGATTGTACC.............        read_9674_0_4_4_1_2_0   MATURESTAR           11        26.83            8        27.59            3        25.00                        21   
......................................................CCATCGACCGTTGATTGTACt.............      read_182465_2_3_0_0_0_0   MATURESTAR            5        12.20            5        17.24            0         0.00            t           20   
......................................................CCATCGACCGTTGATTGTACCt............      read_310621_2_1_0_0_0_0   MATURESTAR            3         7.32            3        10.34            0         0.00            t           21   
......................................................CCATCGACCGTTGATTGTA...............       read_59804_0_1_0_0_1_0   MATURESTAR            2         4.88            1         3.45            1         8.33                        19   
......................................................CCATCGACCGTTGATTGTAt..............      read_405008_1_0_0_0_0_0   MATURESTAR            1         2.44            1         3.45            0         0.00            t           19   
.....................................................ACCATCGACCGTTGATTGgat..............      read_312197_0_1_0_0_0_0   MATURESTAR            1         2.44            1         3.45            0         0.00          gat           18   
......................................................CCATCGACCGTTGATTGTAac.............      read_261168_0_0_0_0_1_0   MATURESTAR            1         2.44            0         0.00            1         8.33           ac           19   
......................................................CCATCGACCGTTGATTGT................      read_187858_0_1_0_0_0_0   MATURESTAR            1         2.44            1         3.45            0         0.00                        18   
.....................................................ACCATCGACCGTTGATTGgAC..............       read_21362_0_0_0_0_0_1   MATURESTAR            1         2.44            0         0.00            1         8.33                      18G2   
......................................................CCATCGACCGTTGATTGTAaca............      read_250483_0_0_0_1_0_0   MATURESTAR            1         2.44            0         0.00            1         8.33          aca           19   
                                                                                                                                     ----------                ----------                ----------   
                                                                                                                                             41                        29                        12                                          
                                                                                                                                                                  (70.73)                   (29.27)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE            2255             394            2649          98.48%
     MATURESTAR              29              12              41           1.52%
                     ----------      ----------      ----------                
                           2284             406            2690                



[END]