[BEGIN]
REFERENCE HAIRPIN
*****************************************************************************************
ID : mmu-mir-151
DESCRIPTION : mmu-mir-151 MI0000173 Mus musculus miR-151 stem-loop
CHROMOSOME : 15
SPAN : 73085245 - 73085312
LENGTH : 68
SEQUENCE : CCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCCTCCCTACTAGACTGAGGCTCCTTGAGGACAGG
OVERHANG THRESHOLD : 75%
*****************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-151-3p
ACCID : MI0000173
PARENT : mmu-mir-151
CHROMOSOME : 15
START : 73085245
STOP : 73085312
OFFSET : 43..63
SEQUENCE : CTAGACTGAGGCTCCTTGAGG
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-151-5p
ACCID : MI0000173
PARENT : mmu-mir-151
CHROMOSOME : 15
START : 73085245
STOP : 73085312
OFFSET : 8..28
SEQUENCE : TCGAGGAGCTCACAGTCTAGT
STRAND : -
******************************
*** MATURE-3P ***
____________________________________________________________________
CCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCCTCCCTACTAGACTGAGGCTCCTTGAGGACAGG REF 15 73085245 - 73085312
CTAGACTGAGGCTCCTTGAGG MATURE-3P 15 73085288 - 73085375 mmu-miR-151-3p -
TCGAGGAGCTCACAGTCTAGT MATURE-5P 15 73085253 - 73085340 mmu-miR-151-5p -
____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...........................................TAGACTGAGGCTCCTTGAGG...... read_239293_0_0_1_0_0_1 MATURE-3P 2 40.00 1 33.33 1 50.00 20
...........................................TAGACTGAGGCTCCTTGAGGt..... read_393760_1_0_0_0_0_0 MATURE-3P 1 20.00 1 33.33 0 0.00 t 20
...........................................TAGACTGAGGCTCCTTGAGGAa.... read_44732_1_0_0_0_0_0 MATURE-3P 1 20.00 1 33.33 0 0.00 a 21
...........................................TAGACTGAGGCTCCTTGAGGta.... read_94399_0_0_0_0_1_0 MATURE-3P 1 20.00 0 0.00 1 50.00 ta 20
---------- ---------- ----------
5 3 2
(60.00) (40.00)
*** MATURE-5P ***
____________________________________________________________________
CCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCCTCCCTACTAGACTGAGGCTCCTTGAGGACAGG REF 15 73085245 - 73085312
CTAGACTGAGGCTCCTTGAGG MATURE-3P 15 73085288 - 73085375 mmu-miR-151-3p -
TCGAGGAGCTCACAGTCTAGT MATURE-5P 15 73085253 - 73085340 mmu-miR-151-5p -
____________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........CGAGGAGCTCACAGTCTAGT......................................... read_43592_2_7_4_1_1_1 MATURE-5P 16 47.06 13 48.15 3 42.86 20
........CGAGGAGCTCACAGTCTAGTA........................................ read_32322_3_3_4_0_1_1 MATURE-5P 12 35.29 10 37.04 2 28.57 21
........CGAGGAGCTCACAGTCTAGTAT....................................... read_410559_0_2_0_0_0_1 MATURE-5P 3 8.82 2 7.41 1 14.29 22
........CGAGGAGCTCACAGTCTAGTAa....................................... read_40165_1_0_0_0_0_1 MATURE-5P 2 5.88 1 3.70 1 14.29 a 21
........CGAGGAGCTCACAGTCTAGTAg....................................... read_192960_0_0_1_0_0_0 MATURE-5P 1 2.94 1 3.70 0 0.00 g 21
---------- ---------- ----------
34 27 7
(79.41) (20.59)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 3 2 5 12.82%
MATURE-5P 27 7 34 87.18%
---------- ---------- ----------
30 9 39
[END]