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REFERENCE HAIRPIN
************************************************************************************************************************
ID                 : mmu-mir-148a
DESCRIPTION        : mmu-mir-148a MI0000550 Mus musculus miR-148a stem-loop
CHROMOSOME         : 6
SPAN               : 51219811 - 51219909
LENGTH             : 99
SEQUENCE           : AGCCAGTTTGGTCTTTTGAGACAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTCTAGAGGCTGTGGTC
OVERHANG THRESHOLD : 75%
************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-148a
ACCID      : MI0000550
PARENT     : mmu-mir-148a
CHROMOSOME : 6
START      : 51219811
STOP       : 51219909
OFFSET     : 61..82
SEQUENCE   : TCAGTGCACTACAGAACTTTGT
STRAND     : -
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-148a*
ACCID      : MI0000550
PARENT     : mmu-mir-148a
CHROMOSOME : 6
START      : 51219811
STOP       : 51219909
OFFSET     : 23..44
SEQUENCE   : AAAGTTCTGAGACACTCCGACT
STRAND     : -
******************************



*** MATURE ***
___________________________________________________________________________________________________
AGCCAGTTTGGTCTTTTGAGACAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTCTAGAGGCTGTGGTC REF                  6                    51219811 - 51219909  
                                                            TCAGTGCACTACAGAACTTTGT                  MATURE               6                    51219872 - 51219991  mmu-miR-148a         -                    
                      AAAGTTCTGAGACACTCCGACT                                                        MATURESTAR           6                    51219834 - 51219953  mmu-miR-148a*        -                    
___________________________________________________________________________________________________

                                                                                               -SEQ-                       -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.............................................................CAGTGCACTACAGAACTTTGT..................       read_81726_0_0_1_0_0_1       MATURE            2        50.00            1        33.33            1       100.00                        21   
.............................................................CAGTGCACcACAGAACTTTG...................      read_164763_1_0_0_0_0_0       MATURE            1        25.00            1        33.33            0         0.00                      8C11   
.............................................................CAGTGCACcACAGAACTTTGT..................      read_243358_1_0_0_0_0_0       MATURE            1        25.00            1        33.33            0         0.00                      8C12   
                                                                                                                                                 ----------                ----------                ----------   
                                                                                                                                                          4                         3                         1                                          
                                                                                                                                                                              (75.00)                   (25.00)                                       




*** MATURESTAR ***
___________________________________________________________________________________________________
AGCCAGTTTGGTCTTTTGAGACAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTCTAGAGGCTGTGGTC REF                  6                    51219811 - 51219909  
                                                            TCAGTGCACTACAGAACTTTGT                  MATURE               6                    51219872 - 51219991  mmu-miR-148a         -                    
                      AAAGTTCTGAGACACTCCGACT                                                        MATURESTAR           6                    51219834 - 51219953  mmu-miR-148a*        -                    
___________________________________________________________________________________________________

                                                                                               -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.......................AAGTTCTGAGACACTCCGACT........................................................   read_298868_0_0_0_0_1_0   MATURESTAR            1        50.00            0            0            1        50.00                        21   
.......................AAGTTCTGAGACACTCCGAC.........................................................   read_361035_0_0_0_0_1_0   MATURESTAR            1        50.00            0            0            1        50.00                        20   
                                                                                                                                              ----------                ----------                ----------   
                                                                                                                                                       2                         0                         2                                          
                                                                                                                                                                            (0.00)                  (100.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               3               1               4          66.67%
     MATURESTAR               0               2               2          33.33%
                     ----------      ----------      ----------                
                              3               3               6                



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