[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-148a
DESCRIPTION : mmu-mir-148a MI0000550 Mus musculus miR-148a stem-loop
CHROMOSOME : 6
SPAN : 51219811 - 51219909
LENGTH : 99
SEQUENCE : AGCCAGTTTGGTCTTTTGAGACAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTCTAGAGGCTGTGGTC
OVERHANG THRESHOLD : 75%
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TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-148a
ACCID : MI0000550
PARENT : mmu-mir-148a
CHROMOSOME : 6
START : 51219811
STOP : 51219909
OFFSET : 61..82
SEQUENCE : TCAGTGCACTACAGAACTTTGT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-148a*
ACCID : MI0000550
PARENT : mmu-mir-148a
CHROMOSOME : 6
START : 51219811
STOP : 51219909
OFFSET : 23..44
SEQUENCE : AAAGTTCTGAGACACTCCGACT
STRAND : -
******************************
*** MATURE ***
___________________________________________________________________________________________________
AGCCAGTTTGGTCTTTTGAGACAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTCTAGAGGCTGTGGTC REF 6 51219811 - 51219909
TCAGTGCACTACAGAACTTTGT MATURE 6 51219872 - 51219991 mmu-miR-148a -
AAAGTTCTGAGACACTCCGACT MATURESTAR 6 51219834 - 51219953 mmu-miR-148a* -
___________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............................................................CAGTGCACTACAGAACTTTGT.................. read_81726_0_0_1_0_0_1 MATURE 2 50.00 1 33.33 1 100.00 21
.............................................................CAGTGCACcACAGAACTTTG................... read_164763_1_0_0_0_0_0 MATURE 1 25.00 1 33.33 0 0.00 8C11
.............................................................CAGTGCACcACAGAACTTTGT.................. read_243358_1_0_0_0_0_0 MATURE 1 25.00 1 33.33 0 0.00 8C12
---------- ---------- ----------
4 3 1
(75.00) (25.00)
*** MATURESTAR ***
___________________________________________________________________________________________________
AGCCAGTTTGGTCTTTTGAGACAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCTCTAGAGGCTGTGGTC REF 6 51219811 - 51219909
TCAGTGCACTACAGAACTTTGT MATURE 6 51219872 - 51219991 mmu-miR-148a -
AAAGTTCTGAGACACTCCGACT MATURESTAR 6 51219834 - 51219953 mmu-miR-148a* -
___________________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................AAGTTCTGAGACACTCCGACT........................................................ read_298868_0_0_0_0_1_0 MATURESTAR 1 50.00 0 0 1 50.00 21
.......................AAGTTCTGAGACACTCCGAC......................................................... read_361035_0_0_0_0_1_0 MATURESTAR 1 50.00 0 0 1 50.00 20
---------- ---------- ----------
2 0 2
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 3 1 4 66.67%
MATURESTAR 0 2 2 33.33%
---------- ---------- ----------
3 3 6
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