[BEGIN]
REFERENCE HAIRPIN
****************************************************************************************************
ID : mmu-mir-147
DESCRIPTION : mmu-mir-147 MI0005482 Mus musculus miR-147 stem-loop
CHROMOSOME : 2
SPAN : 122466539 - 122466617
LENGTH : 79
SEQUENCE : TATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGG
OVERHANG THRESHOLD : 75%
****************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-147
ACCID : MI0005482
PARENT : mmu-mir-147
CHROMOSOME : 2
START : 122466539
STOP : 122466617
OFFSET : 48..69
SEQUENCE : GTGTGCGGAAATGCTTCTGCTA
STRAND : +
******************************
*** MATURE ***
_______________________________________________________________________________
TATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGG REF 2 122466539 - 122466617
GTGTGCGGAAATGCTTCTGCTA MATURE 2 122466587 - 122466686 mmu-miR-147 +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................GTGTGCGGAAATGCTTCTGCTA........... read_194951_0_0_0_0_2_0 MATURE 2 33.33 0 0 2 33.33 22
.................................................GTGCGGAAATGCTTCTGC............. read_83580_0_0_0_1_0_0 MATURE 1 16.67 0 0 1 16.67 18
...............................................GTGTGCGGAAATtCTTCTGCT............ read_348294_0_0_0_0_1_0 MATURE 1 16.67 0 0 1 16.67 12T8
.................................................GTGCGGAAATGCTTCTGCT............ read_389783_0_0_0_1_0_0 MATURE 1 16.67 0 0 1 16.67 19
.................................................GTGCGGAAATGCTTCTGCTA........... read_397114_0_0_0_1_0_0 MATURE 1 16.67 0 0 1 16.67 20
---------- ---------- ----------
6 0 6
(0.00) (100.00)
*** OTHER ***
_______________________________________________________________________________
TATGAATCTAGTGGAAACATTTCTGCACAAACTAGATGTTGATGCCAGTGTGCGGAAATGCTTCTGCTACATTTGTAGG REF 2 122466539 - 122466617
GTGTGCGGAAATGCTTCTGCTA MATURE 2 122466587 - 122466686 mmu-miR-147 +
_______________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
............GGAAACATTTCTGCACAAACTA.............................................. read_10588_0_0_0_1_0_0 OTHER 1 100.00 0 0 1 100.00 22
---------- ---------- ----------
1 0 1
(0.00) (100.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 0 6 6 85.71%
OTHER 0 1 1 14.29%
---------- ---------- ----------
0 7 7
[END]