[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************
ID : mmu-mir-138-2
DESCRIPTION : mmu-mir-138-2 MI0000164 Mus musculus miR-138-2 stem-loop
CHROMOSOME : 8
SPAN : 96848211 - 96848281
LENGTH : 71
SEQUENCE : CAGCTGGTGTTGTGAATCAGGCCGACGAGCAGCGCATCCTCTTACCCGGCTATTTCACGACACCAGGGTTG
OVERHANG THRESHOLD : 75%
********************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-138
ACCID : MI0000164
PARENT : mmu-mir-138-2
CHROMOSOME : 8
START : 96848211
STOP : 96848281
OFFSET : 2..24
SEQUENCE : AGCTGGTGTTGTGAATCAGGCCG
STRAND : +
******************************
*** MATURE ***
_______________________________________________________________________
CAGCTGGTGTTGTGAATCAGGCCGACGAGCAGCGCATCCTCTTACCCGGCTATTTCACGACACCAGGGTTG REF 8 96848211 - 96848281
AGCTGGTGTTGTGAATCAGGCCG MATURE 8 96848213 - 96848305 mmu-miR-138 +
_______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..GCTGGTGTTGTGAATCAGGCCG................................................ read_322248_0_1_4_1_1_2 MATURE 9 56.25 5 71.43 4 44.44 22
..GCTGGTGTTGTGAATCAGG................................................... read_341575_0_0_0_0_1_0 MATURE 1 6.25 0 0.00 1 11.11 19
..GCTGGTGTTGaGAATCAGGCCG................................................ read_128371_1_0_0_0_0_0 MATURE 1 6.25 1 14.29 0 0.00 10A11
..GCTGGcGTTGTGAATCAGGCCG................................................ read_270444_0_0_0_0_1_0 MATURE 1 6.25 0 0.00 1 11.11 5C16
..GCTGGTGTTGTGAATCAGGCCGA............................................... read_283703_1_0_0_0_0_0 MATURE 1 6.25 1 14.29 0 0.00 23
..GCTGGTGTTGTGAATCAGGCat................................................ read_171994_0_0_0_1_0_0 MATURE 1 6.25 0 0.00 1 11.11 at 20
..GCTGGTGTTGTGAATCAGGC.................................................. read_200018_0_0_0_1_0_0 MATURE 1 6.25 0 0.00 1 11.11 20
..GCTGGTGTTGTGAATCAGGCCatt.............................................. read_223704_0_0_0_0_0_1 MATURE 1 6.25 0 0.00 1 11.11 att 21
---------- ---------- ----------
16 7 9
(43.75) (56.25)
*** OTHER ***
_______________________________________________________________________
CAGCTGGTGTTGTGAATCAGGCCGACGAGCAGCGCATCCTCTTACCCGGCTATTTCACGACACCAGGGTTG REF 8 96848211 - 96848281
AGCTGGTGTTGTGAATCAGGCCG MATURE 8 96848213 - 96848305 mmu-miR-138 +
_______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.................................................CTATTTCACGACACCAGGGT... read_195963_0_0_0_0_0_1 OTHER 1 50.00 0 0.00 1 100.00 20
.................................................CTATTTCACGACACCAGGGTT.. read_338163_1_0_0_0_0_0 OTHER 1 50.00 1 100.00 0 0.00 21
---------- ---------- ----------
2 1 1
(50.00) (50.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 7 9 16 88.89%
OTHER 1 1 2 11.11%
---------- ---------- ----------
8 10 18
[END]