[BEGIN]

REFERENCE HAIRPIN
********************************************************************************************************************************************
ID                 : mmu-mir-133b
DESCRIPTION        : mmu-mir-133b MI0000821 Mus musculus miR-133b stem-loop
CHROMOSOME         : 1
SPAN               : 20672850 - 20672968
LENGTH             : 119
SEQUENCE           : CCTCCAAAGGGAGTGGCCCCCTGCTCTGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAGCAGGGCTGGCAAAGCTCAATATTTGGAGA
OVERHANG THRESHOLD : 75%
********************************************************************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-133b
ACCID      : MI0000821
PARENT     : mmu-mir-133b
CHROMOSOME : 1
START      : 20672850
STOP       : 20672968
OFFSET     : 66..87
SEQUENCE   : TTTGGTCCCCTTCAACCAGCTA
STRAND     : +
******************************



*** MATURE ***
_______________________________________________________________________________________________________________________
CCTCCAAAGGGAGTGGCCCCCTGCTCTGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAGCAGGGCTGGCAAAGCTCAATATTTGGAGA REF                  1                    20672850 - 20672968  
                                                                 TTTGGTCCCCTTCAACCAGCTA                                 MATURE               1                    20672916 - 20673055  mmu-miR-133b         +                    
_______________________________________________________________________________________________________________________

                                                                                                                   -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
...................................................................TGGTCCCCTTCAACCAG....................................   read_121282_0_1_0_0_0_0       MATURE            1        33.33            1        33.33            0            0                        17   
...................................................................TGGTCCCCTTCAACCAGCT..................................   read_330574_0_1_0_0_0_0       MATURE            1        33.33            1        33.33            0            0                        19   
..................................................................TTGGTCCCCTTCAACCAGt...................................    read_66069_0_0_1_0_0_0       MATURE            1        33.33            1        33.33            0            0            t           18   
                                                                                                                                                                  ----------                ----------                ----------   
                                                                                                                                                                           3                         3                         0                                          
                                                                                                                                                                                              (100.00)                    (0.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               3               0               3         100.00%
                     ----------      ----------      ----------                
                              3               0               3                



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