[BEGIN]
REFERENCE HAIRPIN
***************************************************************************************
ID : mmu-mir-132
DESCRIPTION : mmu-mir-132 MI0000158 Mus musculus miR-132 stem-loop
CHROMOSOME : 11
SPAN : 74987184 - 74987249
LENGTH : 66
SEQUENCE : GGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCC
OVERHANG THRESHOLD : 75%
***************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-132
ACCID : MI0000158
PARENT : mmu-mir-132
CHROMOSOME : 11
START : 74987184
STOP : 74987249
OFFSET : 42..63
SEQUENCE : TAACAGTCTACAGCCATGGTCG
STRAND : +
******************************
*** MATURE ***
__________________________________________________________________
GGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCC REF 11 74987184 - 74987249
TAACAGTCTACAGCCATGGTCG MATURE 11 74987226 - 74987312 mmu-miR-132 +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..........................................AACAGTCTACAGCCATGGTCGt... read_335065_7_10_5_9_13_11 MATURE 55 52.38 22 62.86 33 47.14 t 21
..........................................AACAGTCTACAGCCATGGTCG.... read_310085_1_2_1_5_6_0 MATURE 15 14.29 4 11.43 11 15.71 21
..........................................AACAGTCTACAGCCATGGTCGtt.. read_358937_0_1_0_2_1_4 MATURE 8 7.62 1 2.86 7 10.00 tt 21
..........................................AACAGTCTACAGCCATGGTC..... read_136853_0_0_0_2_4_0 MATURE 6 5.71 0 0.00 6 8.57 20
..........................................AACAGTCTACAGCaATGGTCGt... read_69098_0_1_0_0_0_1 MATURE 2 1.90 1 2.86 1 1.43 t 13A7
..........................................AACAGTCTACAGCCATGGTCGa... read_244140_0_0_0_1_0_1 MATURE 2 1.90 0 0.00 2 2.86 a 21
..........................................AACAGTCTACAGCCATGGTCtt... read_280917_0_0_1_0_1_0 MATURE 2 1.90 1 2.86 1 1.43 tt 20
..........................................AACAGTCTACAGaCATGGTCGt... read_323535_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.43 t 12A8
...........................................ACAGTCTACAGCCATGGTCGt... read_399935_0_0_0_1_0_0 MATURE 1 0.95 0 0.00 1 1.43 t 20
...........................................ACAGTCTACAGCCATGGTCG.... read_259946_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.43 20
..........................................AACAGTCTACAGCCATGGgCGt... read_390286_0_0_1_0_0_0 MATURE 1 0.95 1 2.86 0 0.00 t 18G2
..........................................AACAGTCTACAGCCATGGTagt... read_397157_0_0_1_0_0_0 MATURE 1 0.95 1 2.86 0 0.00 agt 19
..........................................AACAGTCTACAGCCATGGgtttt.. read_37962_0_0_1_0_0_0 MATURE 1 0.95 1 2.86 0 0.00 gtttt 18
..........................................AACAGTCTACAGCCATGGTCGttt. read_245542_0_0_1_0_0_0 MATURE 1 0.95 1 2.86 0 0.00 ttt 21
..........................................AACtGTCTACAGCCATGGTCGt... read_276656_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.43 t 3T17
..........................................AACAGTCTACAGCCATGGTag.... read_33362_1_0_0_0_0_0 MATURE 1 0.95 1 2.86 0 0.00 ag 19
..........................................AACAGTCTACAGCCATGGTCa.... read_298875_1_0_0_0_0_0 MATURE 1 0.95 1 2.86 0 0.00 a 20
..........................................AACAGTCTACAGCCATGGTCGtta. read_99005_0_0_0_0_1_0 MATURE 1 0.95 0 0.00 1 1.43 tta 21
..........................................cACAGTCTACAGCCATGGTCG.... read_372132_0_0_0_1_0_0 MATURE 1 0.95 0 0.00 1 1.43 20
..........................................AACAGTCTACAGCCATGGTCGtat. read_315574_0_0_0_1_0_0 MATURE 1 0.95 0 0.00 1 1.43 tat 21
..........................................AACAGTCTACAGCCATGGaCG.... read_188198_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.43 18A2
..........................................AACAGTCTACAGCCATGGTCGg... read_207115_0_0_0_0_0_1 MATURE 1 0.95 0 0.00 1 1.43 g 21
---------- ---------- ----------
105 35 70
(33.33) (66.67)
*** OTHER ***
__________________________________________________________________
GGGCAACCGTGGCTTTCGATTGTTACTGTGGGAACCGGAGGTAACAGTCTACAGCCATGGTCGCCC REF 11 74987184 - 74987249
TAACAGTCTACAGCCATGGTCG MATURE 11 74987226 - 74987312 mmu-miR-132 +
__________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.....ACCGTGGCTTTCGATTGTTA.......................................... read_159836_0_0_0_2_1_3 OTHER 6 26.09 0 0.00 6 31.58 20
......CCGTGGCTTTCGATTGTTACT........................................ read_330457_2_0_0_1_2_1 OTHER 6 26.09 2 50.00 4 21.05 21
......CCGTGGCTTTCGATTGTTAC......................................... read_283838_0_0_0_1_2_0 OTHER 3 13.04 0 0.00 3 15.79 20
.....ACCGTGGCTTTCGATTGTTAC......................................... read_274079_0_0_0_0_2_0 OTHER 2 8.70 0 0.00 2 10.53 21
......CCGTtGCTTTCGATTGTTACT........................................ read_386838_0_0_0_0_0_1 OTHER 1 4.35 0 0.00 1 5.26 4T16
.....ACCGcGGCTTTCGATTGTTA.......................................... read_380362_0_0_0_0_0_1 OTHER 1 4.35 0 0.00 1 5.26 4C15
......CCGTGGCTTTCGATTGTTt.......................................... read_396695_0_0_0_0_1_0 OTHER 1 4.35 0 0.00 1 5.26 t 18
......CCGTGGCTTTCGATcGTTACT........................................ read_373481_1_0_0_0_0_0 OTHER 1 4.35 1 25.00 0 0.00 14C6
.....ACCGTGGCTTTCGATTtTTAC......................................... read_64713_0_0_0_0_0_1 OTHER 1 4.35 0 0.00 1 5.26 16T4
......aCGTGGCTTTCGATTGTTACT........................................ read_290163_0_0_1_0_0_0 OTHER 1 4.35 1 25.00 0 0.00 20
---------- ---------- ----------
23 4 19
(17.39) (82.61)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 35 70 105 82.03%
OTHER 4 19 23 17.97%
---------- ---------- ----------
39 89 128
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