[BEGIN]
REFERENCE HAIRPIN
*******************************************************************************************************
ID : mmu-mir-130b
DESCRIPTION : mmu-mir-130b MI0000408 Mus musculus miR-130b stem-loop
CHROMOSOME : 16
SPAN : 17124154 - 17124235
LENGTH : 82
SEQUENCE : GGCTTGTTGGACACTCTTTCCCTGTTGCACTACTGTGGGCCTCTGGGAAGCAGTGCAATGATGAAAGGGCATCTGTCGGGCC
OVERHANG THRESHOLD : 75%
*******************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-130b
ACCID : MI0000408
PARENT : mmu-mir-130b
CHROMOSOME : 16
START : 17124154
STOP : 17124235
OFFSET : 51..72
SEQUENCE : CAGTGCAATGATGAAAGGGCAT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-130b*
ACCID : MI0000408
PARENT : mmu-mir-130b
CHROMOSOME : 16
START : 17124154
STOP : 17124235
OFFSET : 13..34
SEQUENCE : ACTCTTTCCCTGTTGCACTACT
STRAND : -
******************************
*** MATURE ***
__________________________________________________________________________________
GGCTTGTTGGACACTCTTTCCCTGTTGCACTACTGTGGGCCTCTGGGAAGCAGTGCAATGATGAAAGGGCATCTGTCGGGCC REF 16 17124154 - 17124235
CAGTGCAATGATGAAAGGGCAT MATURE 16 17124205 - 17124307 mmu-miR-130b -
ACTCTTTCCCTGTTGCACTACT MATURESTAR 16 17124167 - 17124269 mmu-miR-130b* -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................AGTGCAATGATGAAAGGGCAT........... read_61418_366_398_315_70_99_99 MATURE 1347 62.27 1079 64.19 268 55.60 21
...................................................AGTGCAATGATGAAAGGGCATt.......... read_172197_55_58_61_18_15_14 MATURE 221 10.22 174 10.35 47 9.75 t 21
...................................................AGTGCAATGATGAAAGGGCA............ read_318678_20_26_13_17_17_16 MATURE 109 5.04 59 3.51 50 10.37 20
...................................................AGTGCAATGATGAAAGGGCAa........... read_293658_19_26_16_9_8_12 MATURE 90 4.16 61 3.63 29 6.02 a 20
...................................................AGTGCAATGATGAAAGGGC............. read_18045_6_7_8_6_4_5 MATURE 36 1.66 21 1.25 15 3.11 19
...................................................AGTGCAATGATGAAAGGGCATa.......... read_291215_9_15_9_0_1_1 MATURE 35 1.62 33 1.96 2 0.41 a 21
...................................................AGTGCAATGATGAAAGGGCATtt......... read_347868_9_10_7_0_2_4 MATURE 32 1.48 26 1.55 6 1.24 tt 21
...................................................AGTGCAATGATGAAAGGGCATta......... read_270818_7_9_6_1_4_0 MATURE 27 1.25 22 1.31 5 1.04 ta 21
...................................................AGTGCAATGATGAAAGGGCAat.......... read_21796_2_7_4_1_1_0 MATURE 15 0.69 13 0.77 2 0.41 at 20
.......................................................CAATGATGAAAGGGCAT........... read_17229_1_0_0_2_7_5 MATURE 15 0.69 1 0.06 14 2.90 17
...................................................AGTGCAATGATGAAAGGGtAT........... read_214658_3_2_8_0_0_0 MATURE 13 0.60 13 0.77 0 0.00 18T2
...................................................AGTGCAATGATGAAAGGGCATat......... read_171605_3_3_3_0_1_0 MATURE 10 0.46 9 0.54 1 0.21 at 21
...................................................AGTGCAATGATGAAAGGGCct........... read_255160_1_4_2_0_1_1 MATURE 9 0.42 7 0.42 2 0.41 ct 19
...................................................AGTGCAATGATGAAAGGGCATaa......... read_142002_2_3_3_0_1_0 MATURE 9 0.42 8 0.48 1 0.21 aa 21
...................................................AGTGCAATGATGAAAGGGCAg........... read_250508_4_1_2_1_0_0 MATURE 8 0.37 7 0.42 1 0.21 g 20
...................................................AGTGCAATGATGAAAGGG.............. read_259380_1_4_1_0_2_0 MATURE 8 0.37 6 0.36 2 0.41 18
...................................................AGTGCAATGATGAAAGGGCAaa.......... read_27891_2_2_3_0_0_0 MATURE 7 0.32 7 0.42 0 0.00 aa 20
...................................................AGTGCAATGATGAAAGGGaAT........... read_16849_1_2_0_2_1_1 MATURE 7 0.32 3 0.18 4 0.83 18A2
...................................................AGTGCAATGATGAAcGGGCAT........... read_306109_3_1_1_0_0_1 MATURE 6 0.28 5 0.30 1 0.21 14C6
...................................................AGTGCAATGATGAAAGGGCATtaa........ read_360855_1_2_1_1_0_1 MATURE 6 0.28 4 0.24 2 0.41 taa 21
...................................................AGTGCAATGATGcAAGGGCAT........... read_148105_2_1_2_0_0_0 MATURE 5 0.23 5 0.30 0 0.00 12C8
...................................................AGTGCAATGATGAAAGGGaaa........... read_108322_1_0_1_0_1_2 MATURE 5 0.23 2 0.12 3 0.62 aaa 18
...................................................AGTGCAATGATGAAAGGGCtt........... read_200066_2_0_1_0_0_1 MATURE 4 0.18 3 0.18 1 0.21 tt 19
...................................................AGcGCAATGATGAAAGGGCAT........... read_278573_2_2_0_0_0_0 MATURE 4 0.18 4 0.24 0 0.00 2C18
...................................................AGTGCAATGATGAAAGGGCATtat........ read_221070_0_0_2_0_1_1 MATURE 4 0.18 2 0.12 2 0.41 tat 21
...................................................AGTGCAATGATGAAAGGGgAT........... read_301324_2_0_2_0_0_0 MATURE 4 0.18 4 0.24 0 0.00 18G2
...................................................AGTGCAATGATGAAAGGGa............. read_279522_1_1_2_0_0_0 MATURE 4 0.18 4 0.24 0 0.00 a 18
...................................................AGTGCAATGATGtAAGGGCAT........... read_314756_2_0_0_0_0_1 MATURE 3 0.14 2 0.12 1 0.21 12T8
...................................................AGTGCAATGATGAAAGGtCAT........... read_153496_0_2_0_0_0_1 MATURE 3 0.14 2 0.12 1 0.21 17T3
...................................................AGTGCAATGATGAAAGGGaa............ read_171400_1_1_0_0_1_0 MATURE 3 0.14 2 0.12 1 0.21 aa 18
...................................................AGTGCAATGATGAAgGGGCAT........... read_179369_3_0_0_0_0_0 MATURE 3 0.14 3 0.18 0 0.00 14G6
...................................................AGTGCAATGATGAAAGG............... read_200644_1_0_0_2_0_0 MATURE 3 0.14 1 0.06 2 0.41 17
...................................................AGTGCAATGATGAAtGGGCAT........... read_402867_3_0_0_0_0_0 MATURE 3 0.14 3 0.18 0 0.00 14T6
...................................................AGTGCAATGATGAAAGGGCATtg......... read_64998_1_1_1_0_0_0 MATURE 3 0.14 3 0.18 0 0.00 tg 21
...................................................AGTGCAATGATGAAAGGGCATaaa........ read_240005_2_1_0_0_0_0 MATURE 3 0.14 3 0.18 0 0.00 aaa 21
...................................................AGTGCAATGATGAAcGGGCATt.......... read_6490_1_0_1_0_1_0 MATURE 3 0.14 2 0.12 1 0.21 t 14C6
...................................................AGgGCAATGATGAAAGGGCAT........... read_166260_0_0_2_0_0_1 MATURE 3 0.14 2 0.12 1 0.21 2G18
...................................................AGTGCAATGATGAAAGGGaATt.......... read_72677_0_0_1_2_0_0 MATURE 3 0.14 1 0.06 2 0.41 t 18A2
...................................................AGTGCAATGATGgAAGGGCAT........... read_166504_0_2_1_0_0_0 MATURE 3 0.14 3 0.18 0 0.00 12G8
...................................................AGTGCAATGATGAAAGGGCATC.......... read_270258_2_0_1_0_0_0 MATURE 3 0.14 3 0.18 0 0.00 22
...................................................AGTGCAATGgTGAAAGGGCAT........... read_149959_0_1_2_0_0_0 MATURE 3 0.14 3 0.18 0 0.00 9G11
...................................................cGTGCAATGATGAAAGGGCAT........... read_66921_1_0_0_0_1_1 MATURE 3 0.14 1 0.06 2 0.41 20
...................................................AGTGCAATGATGAgAGGGCAT........... read_156884_0_1_1_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 13G7
...................................................AGTGCAATGATGAAAGGGCAga.......... read_347621_0_2_0_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 ga 20
...................................................AGTtCAATGATGAAAGGGCAT........... read_2813_0_1_1_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 3T17
...................................................AGTGCAATGATGAcAGGGCAT........... read_352227_0_1_0_1_0_0 MATURE 2 0.09 1 0.06 1 0.21 13C7
...................................................AGTGCAATGATGAAAGGGCATg.......... read_240861_0_1_1_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 g 21
...................................................AGTGCAcTGATGAAAGGGCAT........... read_335069_1_0_0_1_0_0 MATURE 2 0.09 1 0.06 1 0.21 6C14
...................................................AGTaCAATGATGAAAGGGCAT........... read_303750_1_0_0_0_0_1 MATURE 2 0.09 1 0.06 1 0.21 3A17
...................................................AGTGCAATGATaAAAGGGCAT........... read_124359_1_1_0_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 11A9
...................................................AGTGCAATGATGAAAGcGCAT........... read_46745_0_0_2_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 16C4
...................................................AGTGCAATGATGAAAGGcCAT........... read_217691_0_0_2_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 17C3
...................................................AGTGCAATGATGAAAGGGCATag......... read_124607_0_1_1_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 ag 21
......................................................GCAATGATGAAAGGGCAT........... read_379594_0_0_0_1_0_1 MATURE 2 0.09 0 0.00 2 0.41 18
...................................................AGTGCAATGATGAAAtGGCA............ read_293481_0_2_0_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 15T4
...................................................AGTGCAATGATGAAAGGGCAata......... read_275849_0_1_1_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 ata 20
...................................................AGTGCAATGATGAAAGGGCAc........... read_310121_0_0_0_2_0_0 MATURE 2 0.09 0 0.00 2 0.41 c 20
...................................................AGTGCAATGATGAAAGtGCAT........... read_345546_0_1_1_0_0_0 MATURE 2 0.09 2 0.12 0 0.00 16T4
...................................................AGTGCAATGATGAAAGGGCATttt........ read_122711_1_0_0_1_0_0 MATURE 2 0.09 1 0.06 1 0.21 ttt 21
...................................................AGTGCAATGATGAAAGGGCtgt.......... read_370878_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 tgt 19
..................................................CAGTGCAATGATGAAAGGGCA............ read_19448_0_0_0_0_0_1 MATURE 1 0.05 0 0.00 1 0.21 21
...................................................AGTGCAATGATGgAAGGGCATtt......... read_59520_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 tt 12G8
......................................................GCAATGATGAAAGGGCATaa......... read_245908_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 aa 18
...................................................AGTGCAATGATGtAAGGGCATt.......... read_43772_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 12T8
...................................................AGTGCAATGATGAAAGcGCATt.......... read_141084_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 16C4
...................................................AGTGCAATtATGAAAGGGCATt.......... read_50535_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 8T12
...................................................AGTGCAATGATGAAAGGGCAaCT......... read_218873_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 20A2
...................................................AGTGCgATGATGAAAGGGCATt.......... read_91663_0_0_0_0_1_0 MATURE 1 0.05 0 0.00 1 0.21 t 5G15
...................................................AGTGCAATGATGAAAGGGgtt........... read_383090_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 gtt 18
...................................................AGTGCAATGATGAAAGGGtATt.......... read_213616_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 18T2
...................................................AGTGCAATGATGAAAaGGCAT........... read_233576_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 15A5
...................................................AGTGCAATGATGAAAGGGCgttt......... read_104395_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 gttt 19
...................................................AGTGtAATGATGAAAGGGCAT........... read_51594_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 4T16
...................................................AGaGCAATGATGAAAGGGCATt.......... read_41_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 2A18
...................................................AGTGCAATGATGAcAGGGCA............ read_166694_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 13C6
...................................................AGTGCAATGATGAcAGGGCATta......... read_279666_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 ta 13C7
...................................................AGTGCAATGATGAAAGGGCttt.......... read_164748_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 ttt 19
...................................................AGTGCAATGATGAAAGGGCATtgt........ read_361487_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 tgt 21
...................................................AGTGCAATGATGAAAGGGCgt........... read_307418_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 gt 19
...................................................AGTcCAATGATGAAAGGGCATt.......... read_352685_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 3C17
...................................................gGTGCAATGATGAAAGGGCAT........... read_128082_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 20
...................................................AGTGCAATGATGAAAGGGtaa........... read_176001_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 taa 18
...................................................AGTGCAgTGATGAAAGGGCAT........... read_51044_0_0_0_1_0_0 MATURE 1 0.05 0 0.00 1 0.21 6G14
...................................................AGTGCAATGATGAAAGGaCAT........... read_261221_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 17A3
...................................................AGTGCAATGATGAAAGaGCAT........... read_379321_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 16A4
...................................................AGTGCAATGATGAcAGGGCATt.......... read_200659_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 13C7
...................................................AGTGCAATGATGAAAGGGta............ read_157047_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 ta 18
...................................................AGTGCAATGATGAAAGGaCATtt......... read_201207_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 tt 17A3
...................................................AGTGCAATGATGAAAGGGCAaata........ read_144280_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 aata 20
....................................................GTGCAATGATGAAAGGGCAT........... read_408282_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 20
...................................................AGTGCAATtATGAAAGGGCAT........... read_339254_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 8T12
...................................................cGTGCAATGATGAAAGGGCATtt......... read_369414_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 tt 20
...................................................AGTGCAATGATGAAAGGGt............. read_236260_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 t 18
...................................................AGTGCAATGATGAAAaGGCATt.......... read_204240_0_0_0_0_1_0 MATURE 1 0.05 0 0.00 1 0.21 t 15A5
...................................................AGTGCAATGATGAAAGGGgaa........... read_43709_0_0_0_0_1_0 MATURE 1 0.05 0 0.00 1 0.21 gaa 18
...................................................AGTGCAATGATGAAAGGGaaaa.......... read_300165_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 aaaa 18
...................................................AGTGCAATGATGAAAGGGtATa.......... read_105937_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 a 18T2
...................................................AGTGCAATGATGAAAGGGCATtcttt...... read_358063_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 tcttt 21
...................................................AGTGCAATGATGAAAGGGCta........... read_408199_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 ta 19
...................................................AGTGCAATGATGAAAGGGCAatt......... read_144213_0_0_1_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 att 20
...................................................AGTGCAATGATGAAAGGGCAaga......... read_398469_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 aga 20
...................................................AGTGCAATGATGAAAGGGCAag.......... read_191181_0_1_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 ag 20
...................................................AGTGCAATGATGAAAGGGCAgtt......... read_209344_1_0_0_0_0_0 MATURE 1 0.05 1 0.06 0 0.00 gtt 20
---------- ---------- ----------
2163 1681 482
(77.72) (22.28)
*** MATURESTAR ***
__________________________________________________________________________________
GGCTTGTTGGACACTCTTTCCCTGTTGCACTACTGTGGGCCTCTGGGAAGCAGTGCAATGATGAAAGGGCATCTGTCGGGCC REF 16 17124154 - 17124235
CAGTGCAATGATGAAAGGGCAT MATURE 16 17124205 - 17124307 mmu-miR-130b -
ACTCTTTCCCTGTTGCACTACT MATURESTAR 16 17124167 - 17124269 mmu-miR-130b* -
__________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............CTCTTTCCCTGTTGCACTA................................................... read_86416_7_4_1_2_0_2 MATURESTAR 16 30.77 12 40.00 4 18.18 19
.............CTCTTTCCCTGTTGCACT.................................................... read_323362_2_2_1_2_0_1 MATURESTAR 8 15.38 5 16.67 3 13.64 18
.............CTCTTTCCCTGTTGCACTAC.................................................. read_14526_1_0_2_1_1_1 MATURESTAR 6 11.54 3 10.00 3 13.64 20
.............CTCTTTCCCTGTTGCACTAa.................................................. read_295038_1_1_1_2_0_0 MATURESTAR 5 9.62 3 10.00 2 9.09 a 19
.............CTCTTTCCCTGTTGCACTAt.................................................. read_185938_1_0_1_0_2_0 MATURESTAR 4 7.69 2 6.67 2 9.09 t 19
.............CTCTTTCCCTGTTGCACTACT................................................. read_204965_0_0_1_0_2_1 MATURESTAR 4 7.69 1 3.33 3 13.64 21
.............CTCTTTCCCTGTTGCACTt................................................... read_68236_0_0_0_1_0_1 MATURESTAR 2 3.85 0 0.00 2 9.09 t 18
.............CTCTTTCCCTGTTGCACTACTa................................................ read_305751_0_0_0_0_1_0 MATURESTAR 1 1.92 0 0.00 1 4.55 a 21
.............CTCTTTCCCTGTTGCACTtgc................................................. read_390683_0_1_0_0_0_0 MATURESTAR 1 1.92 1 3.33 0 0.00 tgc 18
...........CACTCTTTCCCTGTTGCACTAC.................................................. read_64038_0_0_0_0_0_1 MATURESTAR 1 1.92 0 0.00 1 4.55 22
.............CTCTTTCCCTGTTGCACTACa................................................. read_250368_0_0_0_0_0_1 MATURESTAR 1 1.92 0 0.00 1 4.55 a 20
.............CTCTTTCCCTGTTGCACTgt.................................................. read_148729_1_0_0_0_0_0 MATURESTAR 1 1.92 1 3.33 0 0.00 gt 18
.............CTCTTTCCCTGTTGCACTAag................................................. read_52009_0_1_0_0_0_0 MATURESTAR 1 1.92 1 3.33 0 0.00 ag 19
.............CTCTTTCCCTGTTGCACTAagt................................................ read_86264_0_0_1_0_0_0 MATURESTAR 1 1.92 1 3.33 0 0.00 agt 19
---------- ---------- ----------
52 30 22
(57.69) (42.31)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 1681 482 2163 97.65%
MATURESTAR 30 22 52 2.35%
---------- ---------- ----------
1711 504 2215
[END]