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REFERENCE HAIRPIN
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ID : mmu-mir-128-2
DESCRIPTION : mmu-mir-128-2 MI0000726 Mus musculus miR-128-2 stem-loop
CHROMOSOME : 9
SPAN : 112021140 - 112021215
LENGTH : 76
SEQUENCE : CAGTGGGAAGGGGGGCCGATGCACTGTAAGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTG
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-128
ACCID : MI0000726
PARENT : mmu-mir-128-2
CHROMOSOME : 9
START : 112021140
STOP : 112021215
OFFSET : 48..68
SEQUENCE : TCACAGTGAACCGGTCTCTTT
STRAND : -
******************************
*** MATURE ***
____________________________________________________________________________
CAGTGGGAAGGGGGGCCGATGCACTGTAAGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTG REF 9 112021140 - 112021215
TCACAGTGAACCGGTCTCTTT MATURE 9 112021188 - 112021283 mmu-miR-128 -
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................................................CACAGTGAACCGGTCTCTTT......... read_103177_24_32_19_12_11_19 MATURE 117 51.77 75 50.68 42 53.85 20
................................................CACAGTGAACCGGTCTCTTTa........ read_238930_8_2_8_0_2_1 MATURE 21 9.29 18 12.16 3 3.85 a 20
................................................CACAGTGAACCGGTCTCTT.......... read_284647_5_4_1_1_2_2 MATURE 15 6.64 10 6.76 5 6.41 19
................................................CACAGTGAACCGGTCTCTTTat....... read_356917_2_4_2_0_3_2 MATURE 13 5.75 8 5.41 5 6.41 at 20
................................................CACAGTGAACCGGTCTCTTTaa....... read_243482_2_3_1_0_2_2 MATURE 10 4.42 6 4.05 4 5.13 aa 20
................................................CACAGTGAACCGGTCTCTTat........ read_213720_0_4_1_0_2_0 MATURE 7 3.10 5 3.38 2 2.56 at 19
................................................CACAGTGAACCGGTCTCT........... read_128862_1_2_0_0_1_2 MATURE 6 2.65 3 2.03 3 3.85 18
................................................CACAGTGAACCGGTaTCTTT......... read_336274_5_0_0_0_0_0 MATURE 5 2.21 5 3.38 0 0.00 14A5
................................................CACAGTGAACCGGTCTCTTa......... read_136421_1_2_0_0_1_0 MATURE 4 1.77 3 2.03 1 1.28 a 19
................................................CACAGTGAACCGGTCTCTTaa........ read_213271_2_0_1_0_0_0 MATURE 3 1.33 3 2.03 0 0.00 aa 19
................................................CACAGgGAACCGGTCTCTTT......... read_60309_0_0_0_0_1_1 MATURE 2 0.88 0 0.00 2 2.56 5G14
................................................CACAGTGAACCGGTCTCTTTg........ read_184510_0_0_0_1_0_1 MATURE 2 0.88 0 0.00 2 2.56 g 20
................................................CACAGTGAACCGGTCTCTTaat....... read_201980_0_2_0_0_0_0 MATURE 2 0.88 2 1.35 0 0.00 aat 19
................................................tACAGTGAACCGGTCTCTTT......... read_389316_1_0_0_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 19
................................................CACAGTGAACCGGTCTCTTTC........ read_381752_1_0_0_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 21
................................................CACAGTGAACCGGTCTCTTTag....... read_181861_0_0_1_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 ag 20
................................................CACAGTGAACCGGTCTCTg.......... read_300397_0_0_0_0_0_1 MATURE 1 0.44 0 0.00 1 1.28 g 18
................................................CACAGTGAACCGGTCTCTTTaat...... read_20957_0_0_0_1_0_0 MATURE 1 0.44 0 0.00 1 1.28 aat 20
................................................CACAGcGAACCGGTCTCTTT......... read_312654_0_0_0_0_1_0 MATURE 1 0.44 0 0.00 1 1.28 5C14
................................................CACAGTGAACCGGTCTCTTTaaa...... read_291100_0_0_1_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 aaa 20
................................................CACAGTGtACCGGTCTCTTTCtt...... read_7161_0_0_0_0_0_1 MATURE 1 0.44 0 0.00 1 1.28 tt 7T13
................................................CACAGTGAACCGGTCTCTTct........ read_167054_1_0_0_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 ct 19
................................................CACAGTGAACCGGTCTCTTTatt...... read_354474_0_1_0_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 att 20
................................................CACAGTGAACCGGTCTCTTTaaaa..... read_361004_0_0_0_1_0_0 MATURE 1 0.44 0 0.00 1 1.28 aaaa 20
................................................CACAGTGAACCGGgCTCTTT......... read_77542_0_1_0_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 13G6
................................................CACAGTGAgCCGGTCTCTTT......... read_34083_0_0_0_0_1_0 MATURE 1 0.44 0 0.00 1 1.28 8G11
................................................CACAGTGgACCGGTCTCTTT......... read_342575_0_0_0_0_0_1 MATURE 1 0.44 0 0.00 1 1.28 7G12
................................................CACAGTGAACCGGTCTCTTTataa..... read_140203_0_0_0_0_1_0 MATURE 1 0.44 0 0.00 1 1.28 ataa 20
................................................CACAGTGAACCGGTCTCTTTgt....... read_286748_0_0_1_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 gt 20
................................................CACgGTGAACCGGTCTCTTT......... read_11306_0_0_0_0_0_1 MATURE 1 0.44 0 0.00 1 1.28 3G16
................................................CACAGTGAACCGGTCTCTTgtat...... read_288171_1_0_0_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 gtat 19
................................................CACAGTGAACCGGTCTCTTca........ read_129196_1_0_0_0_0_0 MATURE 1 0.44 1 0.68 0 0.00 ca 19
---------- ---------- ----------
226 148 78
(65.49) (34.51)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 148 78 226 100.00%
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148 78 226
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