[BEGIN]

REFERENCE HAIRPIN
********************************************************************************************
ID                 : mmu-mir-125b-2
DESCRIPTION        : mmu-mir-125b-2 MI0000152 Mus musculus miR-125b-2 stem-loop
CHROMOSOME         : 16
SPAN               : 77646518 - 77646588
LENGTH             : 71
SEQUENCE           : GCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGTTCTTGGGACCTAGGC
OVERHANG THRESHOLD : 75%
********************************************************************************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-125b*
ACCID      : MI0000152
PARENT     : mmu-mir-125b-2
CHROMOSOME : 16
START      : 77646518
STOP       : 77646588
OFFSET     : 46..67
SEQUENCE   : ACAAGTCAGGTTCTTGGGACCT
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURE-5P
ID         : mmu-miR-125b-5p
ACCID      : MI0000152
PARENT     : mmu-mir-125b-2
CHROMOSOME : 16
START      : 77646518
STOP       : 77646588
OFFSET     : 7..28
SEQUENCE   : TCCCTGAGACCCTAACTTGTGA
STRAND     : +
******************************



*** MATURE-5P ***
_______________________________________________________________________
GCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGTTCTTGGGACCTAGGC REF                  16                   77646518 - 77646588  
                                             ACAAGTCAGGTTCTTGGGACCT     MATURESTAR           16                   77646564 - 77646655  mmu-miR-125b*        +                    
      TCCCTGAGACCCTAACTTGTGA                                            MATURE-5P            16                   77646525 - 77646616  mmu-miR-125b-5p      +                    
_______________________________________________________________________

                                                                   -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
.......CCCTGAGACCCTAACTTGTGA............................................   read_146603_4_8_3_2_3_3    MATURE-5P           23        44.23           15        38.46            8        61.54                        21   
.......CCCTGAGACCCTAACTTGT..............................................   read_394263_3_9_5_4_0_0    MATURE-5P           21        40.38           17        43.59            4        30.77                        19   
.......CCCTGAGACCCTAACTTGTGt............................................   read_194493_0_0_2_1_0_0    MATURE-5P            3         5.77            2         5.13            1         7.69            t           20   
........CCTGAGACCCTAACTTGTGc............................................   read_391619_0_0_1_0_0_0    MATURE-5P            1         1.92            1         2.56            0         0.00            c           19   
.......CCCTGAGACCCTAACTTGTG.............................................   read_242188_0_0_1_0_0_0    MATURE-5P            1         1.92            1         2.56            0         0.00                        20   
.......CCCTGAGACCCTAACTTG...............................................   read_350822_0_0_1_0_0_0    MATURE-5P            1         1.92            1         2.56            0         0.00                        18   
......TCCCTGAGACCCTAACTTGTGA............................................   read_173459_0_1_0_0_0_0    MATURE-5P            1         1.92            1         2.56            0         0.00                        22   
........CCTGAGACCCTAACTTGTGA............................................   read_176671_1_0_0_0_0_0    MATURE-5P            1         1.92            1         2.56            0         0.00                        20   
                                                                                                                  ----------                ----------                ----------   
                                                                                                                          52                        39                        13                                          
                                                                                                                                               (75.00)                   (25.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
      MATURE-5P              39              13              52         100.00%
                     ----------      ----------      ----------                
                             39              13              52                



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