[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************
ID : mmu-mir-125b-2
DESCRIPTION : mmu-mir-125b-2 MI0000152 Mus musculus miR-125b-2 stem-loop
CHROMOSOME : 16
SPAN : 77646518 - 77646588
LENGTH : 71
SEQUENCE : GCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGTTCTTGGGACCTAGGC
OVERHANG THRESHOLD : 75%
********************************************************************************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-125b*
ACCID : MI0000152
PARENT : mmu-mir-125b-2
CHROMOSOME : 16
START : 77646518
STOP : 77646588
OFFSET : 46..67
SEQUENCE : ACAAGTCAGGTTCTTGGGACCT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-125b-5p
ACCID : MI0000152
PARENT : mmu-mir-125b-2
CHROMOSOME : 16
START : 77646518
STOP : 77646588
OFFSET : 7..28
SEQUENCE : TCCCTGAGACCCTAACTTGTGA
STRAND : +
******************************
*** MATURE-5P ***
_______________________________________________________________________
GCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGTTCTTGGGACCTAGGC REF 16 77646518 - 77646588
ACAAGTCAGGTTCTTGGGACCT MATURESTAR 16 77646564 - 77646655 mmu-miR-125b* +
TCCCTGAGACCCTAACTTGTGA MATURE-5P 16 77646525 - 77646616 mmu-miR-125b-5p +
_______________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......CCCTGAGACCCTAACTTGTGA............................................ read_146603_4_8_3_2_3_3 MATURE-5P 23 44.23 15 38.46 8 61.54 21
.......CCCTGAGACCCTAACTTGT.............................................. read_394263_3_9_5_4_0_0 MATURE-5P 21 40.38 17 43.59 4 30.77 19
.......CCCTGAGACCCTAACTTGTGt............................................ read_194493_0_0_2_1_0_0 MATURE-5P 3 5.77 2 5.13 1 7.69 t 20
........CCTGAGACCCTAACTTGTGc............................................ read_391619_0_0_1_0_0_0 MATURE-5P 1 1.92 1 2.56 0 0.00 c 19
.......CCCTGAGACCCTAACTTGTG............................................. read_242188_0_0_1_0_0_0 MATURE-5P 1 1.92 1 2.56 0 0.00 20
.......CCCTGAGACCCTAACTTG............................................... read_350822_0_0_1_0_0_0 MATURE-5P 1 1.92 1 2.56 0 0.00 18
......TCCCTGAGACCCTAACTTGTGA............................................ read_173459_0_1_0_0_0_0 MATURE-5P 1 1.92 1 2.56 0 0.00 22
........CCTGAGACCCTAACTTGTGA............................................ read_176671_1_0_0_0_0_0 MATURE-5P 1 1.92 1 2.56 0 0.00 20
---------- ---------- ----------
52 39 13
(75.00) (25.00)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-5P 39 13 52 100.00%
---------- ---------- ----------
39 13 52
[END]