[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************************
ID : mmu-mir-125b-1
DESCRIPTION : mmu-mir-125b-1 MI0000725 Mus musculus miR-125b-1 stem-loop
CHROMOSOME : 9
SPAN : 41390009 - 41390085
LENGTH : 77
SEQUENCE : TGCGCTCCCCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTG
OVERHANG THRESHOLD : 75%
**************************************************************************************************
TARGET
******************************
CATEGORY : MATURE-3P
ID : mmu-miR-125b-3p
ACCID : MI0000725
PARENT : mmu-mir-125b-1
CHROMOSOME : 9
START : 41390009
STOP : 41390085
OFFSET : 55..76
SEQUENCE : ACGGGTTAGGCTCTTGGGAGCT
STRAND : +
******************************
TARGET
******************************
CATEGORY : MATURE-5P
ID : mmu-miR-125b-5p
ACCID : MI0000725
PARENT : mmu-mir-125b-1
CHROMOSOME : 9
START : 41390009
STOP : 41390085
OFFSET : 15..36
SEQUENCE : TCCCTGAGACCCTAACTTGTGA
STRAND : +
******************************
*** MATURE-3P ***
_____________________________________________________________________________
TGCGCTCCCCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTG REF 9 41390009 - 41390085
ACGGGTTAGGCTCTTGGGAGCT MATURE-3P 9 41390064 - 41390161 mmu-miR-125b-3p +
TCCCTGAGACCCTAACTTGTGA MATURE-5P 9 41390024 - 41390121 mmu-miR-125b-5p +
_____________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.......................................................CGGGTTAGGCTCTTcGGAGC... read_90264_0_0_0_0_0_1 MATURE-3P 1 100.00 0 0 1 100.00 14C5
---------- ---------- ----------
1 0 1
(0.00) (100.00)
*** MATURE-5P ***
_____________________________________________________________________________
TGCGCTCCCCTCAGTCCCTGAGACCCTAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTG REF 9 41390009 - 41390085
ACGGGTTAGGCTCTTGGGAGCT MATURE-3P 9 41390064 - 41390161 mmu-miR-125b-3p +
TCCCTGAGACCCTAACTTGTGA MATURE-5P 9 41390024 - 41390121 mmu-miR-125b-5p +
_____________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............CCCTGAGACCCTAACTTGTGA.......................................... read_146603_4_8_3_2_3_3 MATURE-5P 23 43.40 15 37.50 8 61.54 21
...............CCCTGAGACCCTAACTTGT............................................ read_394263_3_9_5_4_0_0 MATURE-5P 21 39.62 17 42.50 4 30.77 19
...............CCCTGAGACCCTAACTTGTGt.......................................... read_194493_0_0_2_1_0_0 MATURE-5P 3 5.66 2 5.00 1 7.69 t 20
................CCTGAGACCCTAACTTGTGc.......................................... read_391619_0_0_1_0_0_0 MATURE-5P 1 1.89 1 2.50 0 0.00 c 19
...............CCCTGAGACCCTAACTTG............................................. read_350822_0_0_1_0_0_0 MATURE-5P 1 1.89 1 2.50 0 0.00 18
...............CCCTGAGACCCTAACTTGTGAT......................................... read_205193_0_1_0_0_0_0 MATURE-5P 1 1.89 1 2.50 0 0.00 22
...............CCCTGAGACCCTAACTTGTG........................................... read_242188_0_0_1_0_0_0 MATURE-5P 1 1.89 1 2.50 0 0.00 20
..............TCCCTGAGACCCTAACTTGTGA.......................................... read_173459_0_1_0_0_0_0 MATURE-5P 1 1.89 1 2.50 0 0.00 22
................CCTGAGACCCTAACTTGTGA.......................................... read_176671_1_0_0_0_0_0 MATURE-5P 1 1.89 1 2.50 0 0.00 20
---------- ---------- ----------
53 40 13
(75.47) (24.53)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE-3P 0 1 1 1.85%
MATURE-5P 40 13 53 98.15%
---------- ---------- ----------
40 14 54
[END]