[BEGIN]

REFERENCE HAIRPIN
*****************************************************************************************
ID                 : mmu-mir-124-3
DESCRIPTION        : mmu-mir-124-3 MI0000150 Mus musculus miR-124-3 stem-loop
CHROMOSOME         : 2
SPAN               : 180628745 - 180628812
LENGTH             : 68
SEQUENCE           : CTCTGCGTGTTCACAGCGGACCTTGATTTAATGTCTATACAATTAAGGCACGCGGTGAATGCCAAGAG
OVERHANG THRESHOLD : 75%
*****************************************************************************************


TARGET
******************************
CATEGORY   : MATURE
ID         : mmu-miR-124
ACCID      : MI0000150
PARENT     : mmu-mir-124-3
CHROMOSOME : 2
START      : 180628745
STOP       : 180628812
OFFSET     : 44..63
SEQUENCE   : TAAGGCACGCGGTGAATGCC
STRAND     : +
******************************


TARGET
******************************
CATEGORY   : MATURESTAR
ID         : mmu-miR-124*
ACCID      : MI0000150
PARENT     : mmu-mir-124-3
CHROMOSOME : 2
START      : 180628745
STOP       : 180628812
OFFSET     : 6..27
SEQUENCE   : CGTGTTCACAGCGGACCTTGAT
STRAND     : +
******************************



*** MATURE ***
____________________________________________________________________
CTCTGCGTGTTCACAGCGGACCTTGATTTAATGTCTATACAATTAAGGCACGCGGTGAATGCCAAGAG REF                  2                    180628745 - 180628812 
                                           TAAGGCACGCGGTGAATGCC      MATURE               2                    180628789 - 180628875 mmu-miR-124          +                    
     CGTGTTCACAGCGGACCTTGAT                                          MATURESTAR           2                    180628751 - 180628839 mmu-miR-124*         +                    
____________________________________________________________________

                                                                -SEQ-                    -READ-        -CAT-      -TOTAL-       -TOT%-       -REST-      -REST%-        -ACT-       -ACT%-        -VAR-   -MISMATCH-   
............................................AAGGCACGCGGTGAATGCCA.....   read_282518_2_0_0_0_3_0       MATURE            5       100.00            2       100.00            3       100.00                        20   
                                                                                                               ----------                ----------                ----------   
                                                                                                                        5                         2                         3                                          
                                                                                                                                            (40.00)                   (60.00)                                       




((( SUMMARY )))

          -CAT-          -REST-           -ACT-         -TOTAL-        -TOTAL%-
     ----------      ----------      ----------      ----------      ----------
         MATURE               2               3               5         100.00%
                     ----------      ----------      ----------                
                              2               3               5                



[END]