[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-122
DESCRIPTION : mmu-mir-122 MI0000256 Mus musculus miR-122 stem-loop
CHROMOSOME : 18
SPAN : 65408515 - 65408580
LENGTH : 66
SEQUENCE : AGCTGTGGAGTGTGACAATGGTGTTTGTGTCCAAACCATCAAACGCCATTATCACACTAAATAGCT
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-122
ACCID : MI0000256
PARENT : mmu-mir-122
CHROMOSOME : 18
START : 65408515
STOP : 65408580
OFFSET : 6..27
SEQUENCE : TGGAGTGTGACAATGGTGTTTG
STRAND : +
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*** MATURE ***
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AGCTGTGGAGTGTGACAATGGTGTTTGTGTCCAAACCATCAAACGCCATTATCACACTAAATAGCT REF 18 65408515 - 65408580
TGGAGTGTGACAATGGTGTTTG MATURE 18 65408521 - 65408607 mmu-miR-122 +
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-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
......GGAGTGTGACAATGGTGTTT......................................... read_386171_21_25_21_9_8_16 MATURE 100 78.12 67 78.82 33 76.74 20
......GGAGTGTGACAATGGTGTT.......................................... read_280316_3_4_3_1_1_1 MATURE 13 10.16 10 11.76 3 6.98 19
......GGAGTGTGACAATGGTGT........................................... read_260409_1_0_0_0_1_1 MATURE 3 2.34 1 1.18 2 4.65 18
......GGAGTGTGACAATGGTGTTTG........................................ read_56595_0_0_1_0_0_1 MATURE 2 1.56 1 1.18 1 2.33 21
......GGgGTGTGACAATGGTGTTT......................................... read_45263_0_0_1_0_0_0 MATURE 1 0.78 1 1.18 0 0.00 2G17
......GGAGTGTGACAATGGTGTTTGT....................................... read_301053_0_0_0_0_0_1 MATURE 1 0.78 0 0.00 1 2.33 22
......GGAGTGTGACAATGGTGTTc......................................... read_103120_0_0_0_1_0_0 MATURE 1 0.78 0 0.00 1 2.33 c 19
.......GAGTGTGACAATGGTGTTT......................................... read_287509_0_0_0_1_0_0 MATURE 1 0.78 0 0.00 1 2.33 19
......GGAGTGTGACAATGGTGTTa......................................... read_76698_0_1_0_0_0_0 MATURE 1 0.78 1 1.18 0 0.00 a 19
......GGAGTGTGACAATGGTG............................................ read_300339_0_1_0_0_0_0 MATURE 1 0.78 1 1.18 0 0.00 17
......GGAGTGTGACAATGGTcTTTG........................................ read_169682_0_0_0_0_0_1 MATURE 1 0.78 0 0.00 1 2.33 16C4
......GGAGTGTGACAATGGTGTTTGa....................................... read_290092_0_0_1_0_0_0 MATURE 1 0.78 1 1.18 0 0.00 a 21
......GGAGTGTGACAtTGGTGTTT......................................... read_172099_0_1_0_0_0_0 MATURE 1 0.78 1 1.18 0 0.00 11T8
......GGAGTGTGACAATGGaGTTT......................................... read_180371_0_0_1_0_0_0 MATURE 1 0.78 1 1.18 0 0.00 15A4
---------- ---------- ----------
128 85 43
(66.41) (33.59)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 85 43 128 100.00%
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85 43 128
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