[BEGIN]
REFERENCE HAIRPIN
********************************************************************************************************
ID : mmu-mir-101a
DESCRIPTION : mmu-mir-101a MI0000148 Mus musculus miR-101a stem-loop
CHROMOSOME : 4
SPAN : 101019550 - 101019632
LENGTH : 83
SEQUENCE : AGGCTGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGCCA
OVERHANG THRESHOLD : 75%
********************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-miR-101a
ACCID : MI0000148
PARENT : mmu-mir-101a
CHROMOSOME : 4
START : 101019550
STOP : 101019632
OFFSET : 51..71
SEQUENCE : TACAGTACTGTGATAACTGAA
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-miR-101a*
ACCID : MI0000148
PARENT : mmu-mir-101a
CHROMOSOME : 4
START : 101019550
STOP : 101019632
OFFSET : 14..35
SEQUENCE : TCAGTTATCACAGTGCTGATGC
STRAND : -
******************************
*** MATURE ***
___________________________________________________________________________________
AGGCTGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGCCA REF 4 101019550 - 101019632
TACAGTACTGTGATAACTGAA MATURE 4 101019601 - 101019703 mmu-miR-101a -
TCAGTTATCACAGTGCTGATGC MATURESTAR 4 101019564 - 101019667 mmu-miR-101a* -
___________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...................................................ACAGTACTGTGATAACTGAAG............ read_401449_69_80_50_19_32_37 MATURE 287 33.61 199 37.06 88 27.76 21
...................................................ACAGTACTGTGATAACTGAAt............ read_411508_29_51_27_11_27_28 MATURE 173 20.26 107 19.93 66 20.82 t 20
...................................................ACAGTACTGTGATAACTGA.............. read_245219_22_19_12_22_8_13 MATURE 96 11.24 53 9.87 43 13.56 19
...................................................ACAGTACTGTGATAACTGAAGt........... read_118196_15_19_12_3_3_4 MATURE 56 6.56 46 8.57 10 3.15 t 21
...................................................ACAGTACTGTGATAACTGAAa............ read_385734_9_6_13_6_3_9 MATURE 46 5.39 28 5.21 18 5.68 a 20
...................................................ACAGTACTGTGATAACTGAA............. read_160501_7_12_7_6_3_9 MATURE 44 5.15 26 4.84 18 5.68 20
...................................................ACAGTACTGTGATAACTGAAGa........... read_103684_9_8_7_3_1_5 MATURE 33 3.86 24 4.47 9 2.84 a 21
...................................................ACAGTACTGTGATAACT................ read_85197_1_2_0_9_5_9 MATURE 26 3.04 3 0.56 23 7.26 17
...................................................ACAGTACTGTGATAACTG............... read_255363_2_1_3_1_1_6 MATURE 14 1.64 6 1.12 8 2.52 18
...................................................ACAGTACTGTGATAACTGAAtt........... read_8479_1_4_1_0_1_3 MATURE 10 1.17 6 1.12 4 1.26 tt 20
.....................................................AGTACTGTGATAACTGA.............. read_96784_0_0_0_3_3_1 MATURE 7 0.82 0 0.00 7 2.21 17
...................................................ACAGTACTGTGATAACTGAg............. read_49105_2_0_0_1_1_1 MATURE 5 0.59 2 0.37 3 0.95 g 19
...................................................ACAGTACTGTGATAACTGAAaa........... read_119631_0_0_1_1_1_0 MATURE 3 0.35 1 0.19 2 0.63 aa 20
...................................................ACAGTACTGTGATAACTGt.............. read_299752_1_1_0_1_0_0 MATURE 3 0.35 2 0.37 1 0.32 t 18
...................................................ACAGTACTGTGATAACTGAAGtaa......... read_74372_2_0_1_0_0_0 MATURE 3 0.35 3 0.56 0 0.00 taa 21
......................................................GTACTGTGATAACTGAAG............ read_275085_1_0_1_0_0_0 MATURE 2 0.23 2 0.37 0 0.00 18
...................................................cCAGTACTGTGATAACTGAAt............ read_18192_0_1_0_1_0_0 MATURE 2 0.23 1 0.19 1 0.32 t 19
...................................................ACAGTACTGTGATAACTGAAc............ read_239752_0_2_0_0_0_0 MATURE 2 0.23 2 0.37 0 0.00 c 20
...................................................ACAGTACTGTGATAcCTGAAGt........... read_383674_2_0_0_0_0_0 MATURE 2 0.23 2 0.37 0 0.00 t 14C6
......................................................GTACTGTGATAACTGAA............. read_71680_0_0_0_1_0_1 MATURE 2 0.23 0 0.00 2 0.63 17
...................................................ACAGTACTGTGATAACTGAgg............ read_42136_1_1_0_0_0_0 MATURE 2 0.23 2 0.37 0 0.00 gg 19
...................................................ACAGTACTGTGATcACTGAA............. read_324168_0_0_1_0_0_1 MATURE 2 0.23 1 0.19 1 0.32 13C6
.....................................................AGTACTGTGATAACTGAAt............ read_261939_0_0_0_1_0_0 MATURE 1 0.12 0 0.00 1 0.32 t 18
...................................................ACAGTACTGTGATAACTGtAG............ read_24729_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 18T2
...................................................gCAGTACTGTGATAACTGAAt............ read_165274_0_0_0_1_0_0 MATURE 1 0.12 0 0.00 1 0.32 t 19
..................................................TACAGTACTGTGATAACTGAtg............ read_38809_0_0_0_0_1_0 MATURE 1 0.12 0 0.00 1 0.32 tg 20
...................................................ACAGTACTGgGATAACTGAAGa........... read_226580_0_0_1_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 a 9G11
...................................................ACAGcACTGTGATAACTGAA............. read_362467_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 4C15
...................................................ACAGTACTGTGATAACTtAAGt........... read_220821_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 t 17T3
...................................................ACAGTACTGTGATAACTGAAGtt.......... read_53828_0_1_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 tt 21
....................................................CAGTACTGTGATAACTGAA............. read_6367_0_1_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 19
...................................................ACAGTACcGTGATAACTGAAG............ read_370002_0_1_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 7C13
...................................................ACAGTACTGTGATAcCTGAA............. read_336644_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 14C5
.....................................................AGTACTGTGATAACTGAAG............ read_223929_0_0_0_1_0_0 MATURE 1 0.12 0 0.00 1 0.32 19
...................................................ACAGTACTGTGATAcCTGAAG............ read_242507_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 14C6
...................................................ACAGTACTGTGATAACTGAAag........... read_217209_0_0_1_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 ag 20
...................................................ACAGTACTGTGATAACTGcAG............ read_194252_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 18C2
...................................................ACAGTACTGTGATAACTGAga............ read_279272_0_1_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 ga 19
...................................................cCAGTACTGTGATAACTGA.............. read_399818_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 18
...................................................ACAGTACTGTGATAACTGAgt............ read_281645_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 gt 19
...................................................ACAGTACTGTGATAACcGAAGa........... read_192664_0_1_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 a 16C4
...................................................ACAGcACTGTGATAACTGAAG............ read_403434_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 4C16
...................................................ACAGTACTGTGtTAACTGAAG............ read_139612_0_0_0_0_0_1 MATURE 1 0.12 0 0.00 1 0.32 11T9
.....................................................AGTACTGTGATAACTGAA............. read_233495_0_0_0_0_0_1 MATURE 1 0.12 0 0.00 1 0.32 18
...................................................ACAGgACTGTGATAACTGAAGa........... read_116171_0_0_1_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 a 4G16
...................................................ACAGTACTGTGATAACTGAAGaa.......... read_329900_0_1_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 aa 21
.......................................................TACTGTGATAACTGAAG............ read_394714_0_0_0_1_0_0 MATURE 1 0.12 0 0.00 1 0.32 17
...................................................ACAGTACTGTGATAACTtAAG............ read_233649_0_0_0_0_1_0 MATURE 1 0.12 0 0.00 1 0.32 17T3
...................................................ACAGTACTGTGATAACTtAA............. read_377722_0_0_0_0_1_0 MATURE 1 0.12 0 0.00 1 0.32 17T2
...................................................gCAGTACTGTGATAACTGAAG............ read_116616_0_0_1_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 20
...................................................cCAGTACTGTGATAACTGAA............. read_365173_0_1_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 19
...................................................ACAGTACTGTGgTAACTGAAG............ read_62590_0_0_0_0_0_1 MATURE 1 0.12 0 0.00 1 0.32 11G9
...................................................ACAGTAaTGTGATAACTGAAG............ read_13022_0_0_0_0_1_0 MATURE 1 0.12 0 0.00 1 0.32 6A14
...................................................ACAGTACTGTGATAAtTGAAG............ read_204271_0_0_0_0_0_1 MATURE 1 0.12 0 0.00 1 0.32 15T5
...................................................gCAGTACTGTGATAACTGAAGa........... read_163408_1_0_0_0_0_0 MATURE 1 0.12 1 0.19 0 0.00 a 20
...................................................ACAGTACTaTGATAACTGAAG............ read_112382_0_0_0_0_1_0 MATURE 1 0.12 0 0.00 1 0.32 8A12
---------- ---------- ----------
854 537 317
(62.88) (37.12)
*** MATURESTAR ***
___________________________________________________________________________________
AGGCTGCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCCATTCTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGCCA REF 4 101019550 - 101019632
TACAGTACTGTGATAACTGAA MATURE 4 101019601 - 101019703 mmu-miR-101a -
TCAGTTATCACAGTGCTGATGC MATURESTAR 4 101019564 - 101019667 mmu-miR-101a* -
___________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
..............CAGTTATCACAGTGCTGATGCT................................................ read_110470_2_7_2_0_0_3 MATURESTAR 14 24.56 11 26.83 3 18.75 22
...............AGTTATCACAGTGCTGATGt................................................. read_24536_2_1_3_0_2_1 MATURESTAR 9 15.79 6 14.63 3 18.75 t 19
...............AGTTATCACAGTGCTGATGCT................................................ read_76746_2_2_1_0_1_0 MATURESTAR 6 10.53 5 12.20 1 6.25 21
...............AGTTATCACAGTGCTGATG.................................................. read_302255_2_2_1_0_0_1 MATURESTAR 6 10.53 5 12.20 1 6.25 19
..............CAGTTATCACAGTGCTGATG.................................................. read_176620_1_1_2_0_0_1 MATURESTAR 5 8.77 4 9.76 1 6.25 20
...............AGTTATCACAGTGCTGATGC................................................. read_160255_0_1_0_1_3_0 MATURESTAR 5 8.77 1 2.44 4 25.00 20
..............CAGTTATCACAGTGCTGATGt................................................. read_359494_0_2_2_0_0_0 MATURESTAR 4 7.02 4 9.76 0 0.00 t 20
...............AGTTATCACAGTGCTGATtt................................................. read_401607_0_0_0_0_0_1 MATURESTAR 1 1.75 0 0.00 1 6.25 tt 18
..............CAGTTATCACAGTGCTGATGaa................................................ read_336501_0_1_0_0_0_0 MATURESTAR 1 1.75 1 2.44 0 0.00 aa 20
..............CAGTTATCACAGTGCTGATGC................................................. read_258904_0_1_0_0_0_0 MATURESTAR 1 1.75 1 2.44 0 0.00 21
...............AGTTATCACAGTGCTGA.................................................... read_164795_0_0_0_0_0_1 MATURESTAR 1 1.75 0 0.00 1 6.25 17
...............AGTTATCACAGTGCTGAT................................................... read_166031_0_0_0_1_0_0 MATURESTAR 1 1.75 0 0.00 1 6.25 18
..............CAGTTATCACAGTGaTGATGCT................................................ read_110852_1_0_0_0_0_0 MATURESTAR 1 1.75 1 2.44 0 0.00 14A7
...............AGTTATCACAGTGCTGATGttt............................................... read_294562_0_1_0_0_0_0 MATURESTAR 1 1.75 1 2.44 0 0.00 ttt 19
...............AGTTATCACAGTGCTGATt.................................................. read_146663_0_0_1_0_0_0 MATURESTAR 1 1.75 1 2.44 0 0.00 t 18
---------- ---------- ----------
57 41 16
(71.93) (28.07)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 537 317 854 93.74%
MATURESTAR 41 16 57 6.26%
---------- ---------- ----------
578 333 911
[END]