[BEGIN]
REFERENCE HAIRPIN
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ID : mmu-mir-100
DESCRIPTION : mmu-mir-100 MI0000692 Mus musculus miR-100 stem-loop
CHROMOSOME : 9
SPAN : 41339508 - 41339587
LENGTH : 80
SEQUENCE : CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGCTGATTCTGCACACAAGCTTGTGTCTATAGGTATGTGTCTGTTAGG
OVERHANG THRESHOLD : 75%
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TARGET
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CATEGORY : MATURE
ID : mmu-miR-100
ACCID : MI0000692
PARENT : mmu-mir-100
CHROMOSOME : 9
START : 41339508
STOP : 41339587
OFFSET : 13..34
SEQUENCE : AACCCGTAGATCCGAACTTGTG
STRAND : +
******************************
*** MATURE ***
________________________________________________________________________________
CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGCTGATTCTGCACACAAGCTTGTGTCTATAGGTATGTGTCTGTTAGG REF 9 41339508 - 41339587
AACCCGTAGATCCGAACTTGTG MATURE 9 41339521 - 41339621 mmu-miR-100 +
________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
.............ACCCGTAGATCCGAACTTGT................................................ read_8162_2_0_0_1_2_0 MATURE 5 33.33 2 28.57 3 37.50 20
.............ACCCGTAGATCCGAACTTGTG............................................... read_27863_0_0_1_0_1_1 MATURE 3 20.00 1 14.29 2 25.00 21
.............ACCCGTAGATCCGAAtTTGT................................................ read_311591_0_1_0_0_1_0 MATURE 2 13.33 1 14.29 1 12.50 15T4
.............ACCCGTAGATCCGAACTT.................................................. read_275074_0_0_0_1_1_0 MATURE 2 13.33 0 0.00 2 25.00 18
.............ACCCGTAGATCCGAACTTGTGt.............................................. read_306758_1_1_0_0_0_0 MATURE 2 13.33 2 28.57 0 0.00 t 21
.............ACCCGTAGAaCCGAACTTGTG............................................... read_124197_1_0_0_0_0_0 MATURE 1 6.67 1 14.29 0 0.00 9A11
---------- ---------- ----------
15 7 8
(46.67) (53.33)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 7 8 15 100.00%
---------- ---------- ----------
7 8 15
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