[BEGIN]
REFERENCE HAIRPIN
*********************************************************************************************
ID : mmu-mir-1-2
DESCRIPTION : mmu-mir-1-2 MI0000652 Mus musculus miR-1-2 stem-loop
CHROMOSOME : 18
SPAN : 10785479 - 10785550
LENGTH : 72
SEQUENCE : TCAGAGCACATACTTCTTTATGTACCCATATGAACATTCAGTGCTATGGAATGTAAAGAAGTATGTATTTTG
OVERHANG THRESHOLD : 75%
*********************************************************************************************
TARGET
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CATEGORY : MATURE
ID : mmu-miR-1
ACCID : MI0000652
PARENT : mmu-mir-1-2
CHROMOSOME : 18
START : 10785479
STOP : 10785550
OFFSET : 47..68
SEQUENCE : TGGAATGTAAAGAAGTATGTAT
STRAND : -
******************************
*** MATURE ***
________________________________________________________________________
TCAGAGCACATACTTCTTTATGTACCCATATGAACATTCAGTGCTATGGAATGTAAAGAAGTATGTATTTTG REF 18 10785479 - 10785550
TGGAATGTAAAGAAGTATGTAT MATURE 18 10785526 - 10785618 mmu-miR-1 -
________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
...............................................GGAATGTAAAGAAGTATGTAT..... read_377021_2_1_0_0_3_0 MATURE 6 37.50 3 30.00 3 50.00 21
...............................................GGAATGTAAAGAAGTATGgag..... read_31528_0_2_1_1_0_0 MATURE 4 25.00 3 30.00 1 16.67 gag 18
...............................................GGAATGTAAAGAAGTATGTAc..... read_97595_0_0_0_1_0_1 MATURE 2 12.50 0 0.00 2 33.33 c 20
...............................................GGAATGTAAAGAAGTATGga...... read_108128_0_0_1_0_0_0 MATURE 1 6.25 1 10.00 0 0.00 ga 18
...............................................GGAATGTAAAGAAGTATGTAg..... read_78638_0_1_0_0_0_0 MATURE 1 6.25 1 10.00 0 0.00 g 20
...............................................GGAATGTAAAGAAGTATGT....... read_9742_0_1_0_0_0_0 MATURE 1 6.25 1 10.00 0 0.00 19
.................................................AATGTAAAGAAGTATGTAcct... read_53476_1_0_0_0_0_0 MATURE 1 6.25 1 10.00 0 0.00 cct 18
---------- ---------- ----------
16 10 6
(62.50) (37.50)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 10 6 16 100.00%
---------- ---------- ----------
10 6 16
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