[BEGIN]
REFERENCE HAIRPIN
**************************************************************************************************************
ID : mmu-let-7f-1
DESCRIPTION : mmu-let-7f-1 MI0000562 Mus musculus let-7f-1 stem-loop
CHROMOSOME : 13
SPAN : 48633198 - 48633286
LENGTH : 89
SEQUENCE : ATCAGAGTGAGGTAGTAGATTGTATAGTTGTGGGGTAGTGATTTTACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG
OVERHANG THRESHOLD : 75%
**************************************************************************************************************
TARGET
******************************
CATEGORY : MATURE
ID : mmu-let-7f
ACCID : MI0000562
PARENT : mmu-let-7f-1
CHROMOSOME : 13
START : 48633198
STOP : 48633286
OFFSET : 8..29
SEQUENCE : TGAGGTAGTAGATTGTATAGTT
STRAND : -
******************************
TARGET
******************************
CATEGORY : MATURESTAR
ID : mmu-let-7f*
ACCID : MI0000562
PARENT : mmu-let-7f-1
CHROMOSOME : 13
START : 48633198
STOP : 48633286
OFFSET : 64..85
SEQUENCE : CTATACAATCTATTGCCTTCCC
STRAND : -
******************************
*** MATURE ***
_________________________________________________________________________________________
ATCAGAGTGAGGTAGTAGATTGTATAGTTGTGGGGTAGTGATTTTACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG REF 13 48633198 - 48633286
TGAGGTAGTAGATTGTATAGTT MATURE 13 48633206 - 48633315 mmu-let-7f -
CTATACAATCTATTGCCTTCCC MATURESTAR 13 48633262 - 48633371 mmu-let-7f* -
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
........GAGGTAGTAGATTGTATAGTT............................................................. read_322400_4739_5631_5046_1516_2107_2446 MATURE 21485 53.96 15416 53.79 6069 54.41 21
........GAGGTAGTAGATTGTATAGT.............................................................. read_309611_2223_2607_2162_643_909_957 MATURE 9501 23.86 6992 24.40 2509 22.49 20
........GAGGTAGTAGATTGTATAGTTa............................................................ read_406955_402_457_413_138_184_195 MATURE 1789 4.49 1272 4.44 517 4.63 a 21
........GAGGTAGTAGATTGTATAG............................................................... read_45954_362_432_326_175_198_186 MATURE 1679 4.22 1120 3.91 559 5.01 19
........GAGGTAGTAGATTGTATAtTT............................................................. read_103104_124_208_259_56_94_99 MATURE 840 2.11 591 2.06 249 2.23 18T2
........GAGGTAGTAGATTGTATAtt.............................................................. read_399007_72_119_130_20_35_66 MATURE 442 1.11 321 1.12 121 1.08 tt 18
........GAGGTAGTAGATTGTATAGTa............................................................. read_257062_70_67_64_21_30_29 MATURE 281 0.71 201 0.70 80 0.72 a 20
........GAGGTAGTAGtTTGTATAGTT............................................................. read_160830_35_46_109_5_12_10 MATURE 217 0.55 190 0.66 27 0.24 10T10
........GAGGTAGTAGATTGTATA................................................................ read_136243_31_22_26_41_45_50 MATURE 215 0.54 79 0.28 136 1.22 18
........GAGGTAGTAGATTGTAT................................................................. read_284784_34_52_36_21_22_26 MATURE 191 0.48 122 0.43 69 0.62 17
........GAGGgAGTAGATTGTATAGTT............................................................. read_77313_25_36_70_3_13_28 MATURE 175 0.44 131 0.46 44 0.39 4G16
........GAGGTAGTAGATTGaATAGTT............................................................. read_221436_147_3_2_0_1_2 MATURE 155 0.39 152 0.53 3 0.03 14A6
........GAGGTAGTAGATTGTATAGTaa............................................................ read_381632_22_39_36_7_13_13 MATURE 130 0.33 97 0.34 33 0.30 aa 20
...........GTAGTAGATTGTATAGTT............................................................. read_361691_9_12_12_21_40_34 MATURE 128 0.32 33 0.12 95 0.85 18
........GAGGTAGTAGATTGcATAGTT............................................................. read_57593_109_3_7_1_1_2 MATURE 123 0.31 119 0.42 4 0.04 14C6
........GAGGTAGTAGATTGTATAGTTG............................................................ read_332472_27_39_29_7_7_13 MATURE 122 0.31 95 0.33 27 0.24 22
........GAGGTAGTAGATTGTATAGa.............................................................. read_3447_25_33_29_6_5_8 MATURE 106 0.27 87 0.30 19 0.17 a 19
........GAGGTAGTAGATTGTATAtTTa............................................................ read_62334_12_18_29_5_8_11 MATURE 83 0.21 59 0.21 24 0.22 a 18T2
........GAGGTAGTAGATTGTATAGTat............................................................ read_311221_19_18_19_3_7_9 MATURE 75 0.19 56 0.20 19 0.17 at 20
........GAGGgAGTAGATTGTATAGT.............................................................. read_31443_5_16_35_4_3_9 MATURE 72 0.18 56 0.20 16 0.14 4G15
........GAGGTAGTAGATTGaATAGT.............................................................. read_292602_66_1_2_1_0_0 MATURE 70 0.18 69 0.24 1 0.01 14A5
........GAGGTAGTAGATTGTATAt............................................................... read_315038_16_16_12_5_6_14 MATURE 69 0.17 44 0.15 25 0.22 t 18
........GAGGTAGTAGATTtTATAGTT............................................................. read_190739_8_24_13_4_6_10 MATURE 65 0.16 45 0.16 20 0.18 13T7
........GAGGTAGTAGATTGcATAGT.............................................................. read_68387_50_4_5_2_1_0 MATURE 62 0.16 59 0.21 3 0.03 14C5
...........GTAGTAGATTGTATAGT.............................................................. read_21901_10_6_4_13_11_18 MATURE 62 0.16 20 0.07 42 0.38 17
........GAGGTAGTAGATTGTATAGTTaa........................................................... read_60382_17_16_12_6_2_4 MATURE 57 0.14 45 0.16 12 0.11 aa 21
........GAGGTAGTAGATTGTATAa............................................................... read_208193_13_17_9_3_6_8 MATURE 56 0.14 39 0.14 17 0.15 a 18
........GAGGTAGTAGATTGTATAGTTat........................................................... read_229404_12_13_11_3_6_4 MATURE 49 0.12 36 0.13 13 0.12 at 21
........GAGGTAGTAGATTGTATAGTTc............................................................ read_193691_14_14_10_0_3_3 MATURE 44 0.11 38 0.13 6 0.05 c 21
........GAGGTAGTAGATTGTtTAGTT............................................................. read_249390_0_7_23_1_3_4 MATURE 38 0.10 30 0.10 8 0.07 15T5
........GAGGTAGTAGATTGTATAGct............................................................. read_176877_7_1_12_5_5_6 MATURE 36 0.09 20 0.07 16 0.14 ct 19
........GAGGTAGTAGATTGTATAGTc............................................................. read_60759_8_10_7_3_3_5 MATURE 36 0.09 25 0.09 11 0.10 c 20
........GAtGTAGTAGATTGTATAGTT............................................................. read_365479_6_7_11_3_5_3 MATURE 35 0.09 24 0.08 11 0.10 2T18
........GAGGTAGTAGATTtTATAGT.............................................................. read_243915_7_15_2_4_2_4 MATURE 34 0.09 24 0.08 10 0.09 13T6
........GAGGcAGTAGATTGTATAGTT............................................................. read_44100_4_10_8_5_3_4 MATURE 34 0.09 22 0.08 12 0.11 4C16
........GAGGTAGTAGgTTGTATAGTTGT........................................................... read_154716_7_7_10_0_2_3 MATURE 29 0.07 24 0.08 5 0.04 10G12
........GAGGTAGTAGATTGTATAGTg............................................................. read_133971_8_10_5_1_3_2 MATURE 29 0.07 23 0.08 6 0.05 g 20
........GAGGTAGTAGAcTGTATAGTT............................................................. read_2008_3_12_4_1_3_4 MATURE 27 0.07 19 0.07 8 0.07 11C9
........GAGGTAGTAGATTGTATgGTT............................................................. read_14966_1_9_8_3_2_3 MATURE 26 0.07 18 0.06 8 0.07 17G3
........GAGGTAGTAGATTGTgTAGTT............................................................. read_282510_4_10_3_1_4_4 MATURE 26 0.07 17 0.06 9 0.08 15G5
........GAGGTAGTAGATTGTtTAGT.............................................................. read_186904_1_7_12_1_2_1 MATURE 24 0.06 20 0.07 4 0.04 15T4
........GAGGTAtTAGATTGTATAGTT............................................................. read_367740_8_7_4_0_1_4 MATURE 24 0.06 19 0.07 5 0.04 6T14
........GAGGTAGTAGATcGTATAGTT............................................................. read_139843_8_6_5_2_2_1 MATURE 24 0.06 19 0.07 5 0.04 12C8
........GAGGTAGTAGATTGTAcAGTT............................................................. read_149090_4_3_8_3_4_2 MATURE 24 0.06 15 0.05 9 0.08 16C4
........GAGGTAGTAGATTGTATAGc.............................................................. read_404033_3_5_6_2_4_3 MATURE 23 0.06 14 0.05 9 0.08 c 19
........GAGGTAGcAGATTGTATAGTT............................................................. read_403052_3_6_4_4_2_4 MATURE 23 0.06 13 0.05 10 0.09 7C13
........GAGGTgGTAGATTGTATAGTT............................................................. read_47937_5_6_6_2_0_4 MATURE 23 0.06 17 0.06 6 0.05 5G15
........GAGGTAGTAGtTTGTATAGTTa............................................................ read_366444_6_4_9_0_1_2 MATURE 22 0.06 19 0.07 3 0.03 a 10T10
..........GGTAGTAGATTGTATAGTT............................................................. read_119210_4_6_2_0_7_3 MATURE 22 0.06 12 0.04 10 0.09 19
........GAGGTAGTAGcTTGTATAGTT............................................................. read_107682_4_11_5_0_0_0 MATURE 20 0.05 20 0.07 0 0.00 10C10
........GAGGTAGTAGATTGTATAGaa............................................................. read_77179_6_4_4_3_1_2 MATURE 20 0.05 14 0.05 6 0.05 aa 19
........GAGGaAGTAGATTGTATAGTT............................................................. read_330822_2_3_12_1_0_1 MATURE 19 0.05 17 0.06 2 0.02 4A16
........GAGGTAGTAGATTGTATtGTT............................................................. read_44540_5_2_6_2_2_2 MATURE 19 0.05 13 0.05 6 0.05 17T3
........tAGGTAGTAGATTGTATAGTT............................................................. read_195854_5_2_5_5_1_0 MATURE 18 0.05 12 0.04 6 0.05 20
........cAGGTAGTAGATTGTATAGTT............................................................. read_234961_3_2_5_1_3_3 MATURE 17 0.04 10 0.03 7 0.06 20
........GAGGTAGTAGATTGTgTAGT.............................................................. read_294831_3_4_4_1_1_4 MATURE 17 0.04 11 0.04 6 0.05 15G4
........GAGGTAGTAGATTGTATgGT.............................................................. read_83215_7_4_0_1_2_2 MATURE 16 0.04 11 0.04 5 0.04 17G2
........GAGGTAGTAGATTGTATAGTTta........................................................... read_204267_4_4_3_3_0_1 MATURE 15 0.04 11 0.04 4 0.04 ta 21
........GAGGTAGTAGATTGTATAtta............................................................. read_146995_5_4_2_2_1_1 MATURE 15 0.04 11 0.04 4 0.04 tta 18
........GAGGTAGTAGATTGgATAGTT............................................................. read_239637_13_1_1_0_0_0 MATURE 15 0.04 15 0.05 0 0.00 14G6
........GAGtTAGTAGATTGTATAGTT............................................................. read_40645_2_4_8_0_1_0 MATURE 15 0.04 14 0.05 1 0.01 3T17
...........GTAGTAGATTGTATAGTTa............................................................ read_273708_4_0_1_2_5_2 MATURE 14 0.04 5 0.02 9 0.08 a 18
........GAGGTAtTAGATTGTATAGT.............................................................. read_219718_3_6_3_0_0_1 MATURE 13 0.03 12 0.04 1 0.01 6T13
........GAGGTAGTAGATTGTATAGTgt............................................................ read_183253_2_3_0_3_1_4 MATURE 13 0.03 5 0.02 8 0.07 gt 20
........GAGGTAGTAGATTcTATAGTT............................................................. read_130140_2_5_3_1_1_1 MATURE 13 0.03 10 0.03 3 0.03 13C7
........GAGGTAGTAGATTGTATAaTT............................................................. read_59004_5_4_0_0_2_2 MATURE 13 0.03 9 0.03 4 0.04 18A2
........GAGGTgGTAGATTGTATAGT.............................................................. read_163721_4_2_4_0_1_2 MATURE 13 0.03 10 0.03 3 0.03 5G14
........GAGGTAGTAtATTGTATAGTT............................................................. read_273610_2_7_3_0_1_0 MATURE 13 0.03 12 0.04 1 0.01 9T11
........GAGGTAGTAGATcGTATAGT.............................................................. read_315815_3_3_5_0_2_0 MATURE 13 0.03 11 0.04 2 0.02 12C7
........GAGGTAGTAGATTaTATAGTT............................................................. read_13448_1_4_2_0_2_3 MATURE 12 0.03 7 0.02 5 0.04 13A7
........GAGGcAGTAGATTGTATAGT.............................................................. read_296150_2_1_8_0_1_0 MATURE 12 0.03 11 0.04 1 0.01 4C15
........GAGGTAGTAGATTGaATAGTTa............................................................ read_368734_12_0_0_0_0_0 MATURE 12 0.03 12 0.04 0 0.00 a 14A6
........GAGGTAGTgGATTGTATAGTT............................................................. read_285418_2_2_3_0_4_0 MATURE 11 0.03 7 0.02 4 0.04 8G12
........GAGGTAGTAGATTGTATAGg.............................................................. read_117849_5_2_2_0_1_1 MATURE 11 0.03 9 0.03 2 0.02 g 19
........aAGGTAGTAGATTGTATAGT.............................................................. read_133915_1_0_6_2_1_0 MATURE 10 0.03 7 0.02 3 0.03 19
........GAGGTcGTAGATTGTATAGTT............................................................. read_278328_3_2_3_1_1_0 MATURE 10 0.03 8 0.03 2 0.02 5C15
........GAaGTAGTAGATTGTATAGTT............................................................. read_322794_4_3_0_0_1_2 MATURE 10 0.03 7 0.02 3 0.03 2A18
........GAGGTAGTAGAcTGTATAGT.............................................................. read_366279_2_4_1_1_0_2 MATURE 10 0.03 7 0.02 3 0.03 11C8
........GAGGTAGTAGATTGTATtGT.............................................................. read_278405_3_2_4_0_0_0 MATURE 9 0.02 9 0.03 0 0.00 17T2
........GAGGTAGTAGATTcTATAGT.............................................................. read_268682_3_3_2_0_1_0 MATURE 9 0.02 8 0.03 1 0.01 13C6
........GAGGTAGTAGATTGTATcGTT............................................................. read_2460_0_3_2_1_1_2 MATURE 9 0.02 5 0.02 4 0.04 17C3
........GAGGTAGTAGATTaTATAGT.............................................................. read_37010_4_4_1_0_0_0 MATURE 9 0.02 9 0.03 0 0.00 13A6
........GAGGTAGaAGATTGTATAGTT............................................................. read_173834_1_3_2_0_2_1 MATURE 9 0.02 6 0.02 3 0.03 7A13
........GAGGTAGcAGATTGTATAGT.............................................................. read_41543_4_2_0_0_2_0 MATURE 8 0.02 6 0.02 2 0.02 7C12
........GAGGaAGTAGATTGTATAGT.............................................................. read_226776_0_0_7_0_0_1 MATURE 8 0.02 7 0.02 1 0.01 4A15
........tAGGTAGTAGATTGTATAGT.............................................................. read_123498_3_1_2_2_0_0 MATURE 8 0.02 6 0.02 2 0.02 19
........GAGGTAGTAGATTGTATAcTT............................................................. read_176119_2_2_0_2_1_1 MATURE 8 0.02 4 0.01 4 0.04 18C2
........aAGGTAGTAGATTGTATAGTT............................................................. read_194263_1_2_0_1_2_2 MATURE 8 0.02 3 0.01 5 0.04 20
........GAGGTAGTAGATTGTATAGat............................................................. read_267925_2_1_1_2_2_0 MATURE 8 0.02 4 0.01 4 0.04 at 19
........GAGGgAGTAGATTGTATAGTTa............................................................ read_165141_0_2_3_0_1_2 MATURE 8 0.02 5 0.02 3 0.03 a 4G16
........GAGGTAGTAcATTGTATAGTT............................................................. read_289309_2_1_3_0_1_1 MATURE 8 0.02 6 0.02 2 0.02 9C11
.........AGGTAGTAGATTGTATAGTT............................................................. read_228897_2_2_1_1_1_0 MATURE 7 0.02 5 0.02 2 0.02 20
........GAGGTAGTAGATTGTcTAGTT............................................................. read_30329_0_3_1_1_1_1 MATURE 7 0.02 4 0.01 3 0.03 15C5
........GAGtTAGTAGATTGTATAGT.............................................................. read_397093_1_2_1_1_1_1 MATURE 7 0.02 4 0.01 3 0.03 3T16
........GAGcTAGTAGATTGTATAGTT............................................................. read_305191_2_1_2_0_1_1 MATURE 7 0.02 5 0.02 2 0.02 3C17
........GAGGTAGTAGATTGTATAat.............................................................. read_317689_2_3_1_0_0_1 MATURE 7 0.02 6 0.02 1 0.01 at 18
........GAGGTAGTAGATTGTATAta.............................................................. read_159600_2_2_2_0_0_1 MATURE 7 0.02 6 0.02 1 0.01 ta 18
........GAGGTAGTAGATTGTATAtTTG............................................................ read_335483_1_1_2_1_1_1 MATURE 7 0.02 4 0.01 3 0.03 18T3
........cAGGTAGTAGATTGTATAGT.............................................................. read_49187_2_2_2_1_0_0 MATURE 7 0.02 6 0.02 1 0.01 19
........GAcGTAGTAGATTGTATAGTT............................................................. read_333237_2_3_0_1_0_1 MATURE 7 0.02 5 0.02 2 0.02 2C18
........GAGGTAGTtGATTGTATAGTT............................................................. read_160851_4_1_1_0_0_1 MATURE 7 0.02 6 0.02 1 0.01 8T12
........GAGGTAGTAGATTtTATAGTTa............................................................ read_281033_2_3_1_0_0_0 MATURE 6 0.02 6 0.02 0 0.00 a 13T7
........GAGGTAGTAGATTGTAcAGT.............................................................. read_323672_3_0_1_0_1_1 MATURE 6 0.02 4 0.01 2 0.02 16C3
........GAGGTAGTAaATTGTATAGTT............................................................. read_105902_0_4_0_0_2_0 MATURE 6 0.02 4 0.01 2 0.02 9A11
........GAGaTAGTAGATTGTATAGT.............................................................. read_257893_1_2_0_1_0_2 MATURE 6 0.02 3 0.01 3 0.03 3A16
..........GGTAGTAGATTGTATAGT.............................................................. read_159432_0_0_2_2_1_1 MATURE 6 0.02 2 0.01 4 0.04 18
........GAGGcAGTAGATTGTATAGTTa............................................................ read_86899_0_1_4_1_0_0 MATURE 6 0.02 5 0.02 1 0.01 a 4C16
........GAGGTAGTAGATTGTATAGgt............................................................. read_303808_2_0_3_0_0_0 MATURE 5 0.01 5 0.02 0 0.00 gt 19
........GAGGTAGTAGATTGTATAGaaa............................................................ read_279262_1_3_1_0_0_0 MATURE 5 0.01 5 0.02 0 0.00 aaa 19
........GAGaTAGTAGATTGTATAGTT............................................................. read_803_0_0_2_1_1_1 MATURE 5 0.01 2 0.01 3 0.03 3A17
........GAGGTAGTAGATTGTATAaa.............................................................. read_272056_1_0_4_0_0_0 MATURE 5 0.01 5 0.02 0 0.00 aa 18
........GAGGTAGTAGATTGTATAGTTGT........................................................... read_179957_2_2_1_0_0_0 MATURE 5 0.01 5 0.02 0 0.00 23
.........AGGTAGTAGATTGTATAGT.............................................................. read_273083_2_3_0_0_0_0 MATURE 5 0.01 5 0.02 0 0.00 19
........GAGGTAGTAGcTTGTATAGT.............................................................. read_182767_0_2_2_0_0_1 MATURE 5 0.01 4 0.01 1 0.01 10C9
........GAGGTAGTAGATTGTAaAGTT............................................................. read_371570_2_3_0_0_0_0 MATURE 5 0.01 5 0.02 0 0.00 16A4
........GAGGTAGTAGATTGcATAGTTa............................................................ read_346536_2_1_0_0_2_0 MATURE 5 0.01 3 0.01 2 0.02 a 14C6
........GAGGTAGTAGATTGTAgAGT.............................................................. read_115568_0_2_2_0_0_0 MATURE 4 0.01 4 0.01 0 0.00 16G3
........GAGGTAGTAGATTGTATAttaa............................................................ read_147685_1_1_2_0_0_0 MATURE 4 0.01 4 0.01 0 0.00 ttaa 18
........GAGGTAGTAGATTGTATAGTTag........................................................... read_100283_0_1_3_0_0_0 MATURE 4 0.01 4 0.01 0 0.00 ag 21
........GAGGTAGTAGATTGTtTAGTTa............................................................ read_239026_1_1_0_0_1_1 MATURE 4 0.01 2 0.01 2 0.02 a 15T5
........GAGGTAaTAGATTGTATAGTT............................................................. read_352512_2_0_1_0_1_0 MATURE 4 0.01 3 0.01 1 0.01 6A14
........GAGGTAGaAGATTGTATAGT.............................................................. read_13907_0_0_1_0_1_2 MATURE 4 0.01 1 0.00 3 0.03 7A12
........GAGGTAGTAGATTGTATAtg.............................................................. read_22673_0_0_4_0_0_0 MATURE 4 0.01 4 0.01 0 0.00 tg 18
........GAGGTAGTAGATTGTATAGTag............................................................ read_365389_2_0_1_0_0_1 MATURE 4 0.01 3 0.01 1 0.01 ag 20
........GAGGTAGTAGATTGTcTAGT.............................................................. read_30976_0_0_1_0_2_1 MATURE 4 0.01 1 0.00 3 0.03 15C4
........GAGGTAGTAGAcTGTATAGTTa............................................................ read_98880_0_1_1_0_1_1 MATURE 4 0.01 2 0.01 2 0.02 a 11C9
........GAGGTcGTAGATTGTATAGT.............................................................. read_255094_0_1_0_0_1_1 MATURE 3 0.01 1 0.00 2 0.02 5C14
........GAGGTAGTAGATTGTAaAGT.............................................................. read_398300_0_0_0_1_1_1 MATURE 3 0.01 0 0.00 3 0.03 16A3
........GAGGTAGTAGATaGTATAGT.............................................................. read_192617_2_1_0_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 12A7
........GAGGTAGTAGATaGTATAGTT............................................................. read_289296_2_0_0_1_0_0 MATURE 3 0.01 2 0.01 1 0.01 12A8
........GAGGTAGgAGATTGTATAGTT............................................................. read_171234_0_0_3_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 7G13
........GAGGTAGTAGATTGTAcAGTTa............................................................ read_408606_1_0_0_0_1_1 MATURE 3 0.01 1 0.00 2 0.02 a 16C4
........GAGGTAGTAGtTTGTATAGTTc............................................................ read_295758_1_0_0_1_0_1 MATURE 3 0.01 1 0.00 2 0.02 c 10T10
........GAGGTAGTAGtTTGTATAGTTat........................................................... read_367493_0_2_1_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 at 10T10
........GAGGTAGTAGATTGTATAGTTtc........................................................... read_64334_1_0_1_0_0_1 MATURE 3 0.01 2 0.01 1 0.01 tc 21
........GAGGTAGTAGATTGTATAGTTGa........................................................... read_138327_0_2_1_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 a 22
........GAGGTAGTAGATTGTATAGTTaaa.......................................................... read_298088_0_2_1_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 aaa 21
........GAGGTAaTAGATTGTATAGT.............................................................. read_345906_1_1_0_0_0_1 MATURE 3 0.01 2 0.01 1 0.01 6A13
........GAGGTAGTAGATTGTAgAGTT............................................................. read_40134_1_1_1_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 16G4
........GAGGTAGTAGATTGTATAtct............................................................. read_211351_1_0_2_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 tct 18
........GAGGTAGTcGATTGTATAGT.............................................................. read_138333_2_0_1_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 8C11
........GAGGTAGTAGATTGTATcGT.............................................................. read_23299_1_0_1_0_1_0 MATURE 3 0.01 2 0.01 1 0.01 17C2
..........GGTAGTAGATTGTATAGTTGT........................................................... read_276379_1_0_2_0_0_0 MATURE 3 0.01 3 0.01 0 0.00 21
........GAGGTtGTAGATTGTATAGTT............................................................. read_102840_1_0_1_0_0_1 MATURE 3 0.01 2 0.01 1 0.01 5T15
........GAGGTAGTAGAaTGTATAGTT............................................................. read_27167_1_0_0_0_1_0 MATURE 2 0.01 1 0.00 1 0.01 11A9
........GAGGTAGTAGATTGTATAttag............................................................ read_365746_0_0_0_0_0_2 MATURE 2 0.01 0 0.00 2 0.02 ttag 18
........GAGGTAGTAGATTGcATAGTTaa........................................................... read_267659_1_0_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 aa 14C6
........GAGGTAGTAGATTGTATAcTTa............................................................ read_341785_1_0_0_0_1_0 MATURE 2 0.01 1 0.00 1 0.01 a 18C2
........GAGGTAGTAGATTGTATAct.............................................................. read_206255_1_0_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 ct 18
........GAGGTAGTAGATTGTATAGTaaa........................................................... read_139802_0_1_0_0_0_1 MATURE 2 0.01 1 0.00 1 0.01 aaa 20
........GAGGTAGTAGATTGTgTAGTTa............................................................ read_6226_2_0_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 a 15G5
........GAGGTAGTAGATTGTATAGTTaga.......................................................... read_120887_0_1_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 aga 21
........GAGGTAGTAGATTGTATAGTga............................................................ read_117629_0_2_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 ga 20
........GAGGTAGTAGATTGTATAttat............................................................ read_241143_1_0_0_0_1_0 MATURE 2 0.01 1 0.00 1 0.01 ttat 18
.........gGGTAGTAGATTGTATAGT.............................................................. read_343598_1_0_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 18
........GAGGTAGTAGATcGTATAGTTaa........................................................... read_105802_0_2_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 aa 12C8
........GAGGgAGTAGATTGTATAGTTat........................................................... read_330024_0_0_2_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 at 4G16
........GAGGTAGTAGATTGTATAGTca............................................................ read_31048_1_0_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 ca 20
........GAGGTAGTAGATTGcATAGTTG............................................................ read_271804_1_1_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 14C7
........GAGGaAGTAGATTGTATAGTTa............................................................ read_207674_0_1_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 a 4A16
........GAaGTAGTAGATTGTATAGT.............................................................. read_366193_1_1_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 2A17
...........GTAGTAGATTGTATAGTTaa........................................................... read_58667_0_1_0_0_0_1 MATURE 2 0.01 1 0.00 1 0.01 aa 18
........GAGGTgGTAGATTGTATAGTTa............................................................ read_126688_0_0_2_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 a 5G15
........GAGGTAGTAGATgGTATAGT.............................................................. read_281177_1_1_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 12G7
........GAGGTAGTAGATTGgATAGTTa............................................................ read_302630_2_0_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 a 14G6
.........AGGTAGTAGATTGTATAGTTa............................................................ read_191012_1_0_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 a 20
........GAGGTAGTAGATTGTATAttc............................................................. read_86722_0_0_2_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 ttc 18
........GAGGTAGTAGATTGTATgGTTa............................................................ read_383834_1_1_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 a 17G3
......cTGAGGTAGTAGATTGTATAGTT............................................................. read_104028_1_1_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 22
........GAcGTAGTAGATTGTATAGT.............................................................. read_57745_1_0_0_0_0_1 MATURE 2 0.01 1 0.00 1 0.01 2C17
........GAGGTAGTAGATTGTATAtat............................................................. read_101023_1_0_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 tat 18
........GAGGTAGTAGtTTGTATAGTTaa........................................................... read_9096_0_1_0_0_1_0 MATURE 2 0.01 1 0.00 1 0.01 aa 10T10
........GAGtTAGTAGATTGTATAGTTa............................................................ read_258599_0_1_0_0_1_0 MATURE 2 0.01 1 0.00 1 0.01 a 3T17
........GAcGTAGTAGATTGTATAGTTa............................................................ read_1961_1_0_0_0_0_1 MATURE 2 0.01 1 0.00 1 0.01 a 2C18
........GAGcTAGTAGATTGTATAGT.............................................................. read_324426_1_1_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 3C16
........GAGGTAGTAGATTGTATtGTTa............................................................ read_264145_0_1_1_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 a 17T3
........GAGGTAGTAGATTGTATAttg............................................................. read_7130_2_0_0_0_0_0 MATURE 2 0.01 2 0.01 0 0.00 ttg 18
........GAGGTAGTAGATTGTATAGTTatt.......................................................... read_135305_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 att 21
........GAGGTAtTAGATTGTATAGTTat........................................................... read_345073_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 at 6T14
......cTGAGGTAGTAGATTGTATAtt.............................................................. read_164268_0_0_0_1_0_0 MATURE 1 0.00 0 0.00 1 0.01 tt 19
........GAGGTAGcAGATTGTATAGTTa............................................................ read_297948_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 a 7C13
........GAGGTAGTAGATTGTATAGTTata.......................................................... read_116936_0_0_0_1_0_0 MATURE 1 0.00 0 0.00 1 0.01 ata 21
........GAGGcAGTAGATTGTATAGTTG............................................................ read_173315_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 4C17
........GAGGTAGTAGATTGTATAGTTac........................................................... read_271903_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 ac 21
........GAGGTAGTAGATTGTATAtgct............................................................ read_37415_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 tgct 18
........GAGGTAGTAGATTGTATAag.............................................................. read_311185_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 ag 18
........GAGGTAtTAGATTGTATAGTTa............................................................ read_155147_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 6T14
........GAGGTAGTAGATTGTATAc............................................................... read_125545_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 c 18
........cAGGTAGTAGATTGTATAGTat............................................................ read_22598_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 at 19
........GAtGTAGTAGATTGTATAGTTa............................................................ read_344917_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 2T18
........GAGGTAGTAGATTGTATAGgta............................................................ read_324780_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 gta 19
........cAGGTAGTAGATTGTATAGgta............................................................ read_55295_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 gta 18
........GAGGTAGTAGATTGTATAatc............................................................. read_113487_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 atc 18
........GAGGTAGTAGATTGTATAGTac............................................................ read_288358_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 ac 20
........GAGGTAGTAGATTGaATAGTTatt.......................................................... read_228003_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 att 14A6
........GAGGTAGTAGATTGTATAGac............................................................. read_124411_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 ac 19
........GAGGTtGTAGATTGTATAGT.............................................................. read_83382_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 5T14
........GAGGTAGTAGATTGTATAtaa............................................................. read_131665_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 taa 18
........GAGGTAGTAGATTGTATAtc.............................................................. read_349110_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 tc 18
........GAGGTAGaAGATTGTATAGTTG............................................................ read_200239_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 7A14
........GAGGTAGTAGATTGTAcAGTTG............................................................ read_242972_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 16C5
........GAGGTAGTAGATTGTATcGTTa............................................................ read_393144_0_0_0_0_0_1 MATURE 1 0.00 0 0.00 1 0.01 a 17C3
........GAGGTAGTAGATTGTATAata............................................................. read_334494_0_0_0_1_0_0 MATURE 1 0.00 0 0.00 1 0.01 ata 18
........GAGGTAGTAGATTGTATAGTct............................................................ read_398639_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 ct 20
........GAGGTAGTAGATTGTATAGTTtg........................................................... read_188763_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 tg 21
........GAGGTAGTAGATgGTATAGTTGT........................................................... read_365784_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 12G10
........GAGGTAGTgGATTGTATAGTTat........................................................... read_81674_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 at 8G12
........GAGGTAGgAGATTGTATAGT.............................................................. read_159201_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 7G12
........GAGGTAGTAGATTGTATAGgaa............................................................ read_132691_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 gaa 19
........GAGGTtGTAGATTGTATAGTTc............................................................ read_369994_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 c 5T15
..........GGTAGTAGATTGTATAGTTG............................................................ read_299379_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 20
........GAGGTAGTAGATTtTATAGTTG............................................................ read_160634_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 13T8
........cAGGTAGTAGATTGTATAG............................................................... read_56297_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 18
........GAGGTAGTgGATTGTATAGTTG............................................................ read_205592_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 8G13
........GAGGTAGTAGATTGTcTAGTTa............................................................ read_137377_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 15C5
........GAGGTAGTAGATTGTATAGTcaa........................................................... read_117598_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 caa 20
.........AGGTAGTAGATTGTATA................................................................ read_317743_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 17
........GAGGTAGTAGATTGTAaAGTTa............................................................ read_112477_0_0_0_1_0_0 MATURE 1 0.00 0 0.00 1 0.01 a 16A4
........GAGGTAGTAGATTGTATAGgttgtatt....................................................... read_355551_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 gttgtatt 19
......cTGAGGTAGTAGATTGTATAGT.............................................................. read_47891_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 21
...........GTAGTAGATTGTATAGTTat........................................................... read_364815_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 at 18
.............AGTAGATTGTATAGTTG............................................................ read_231562_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 17
........GAGGTAGTAGATTGaATAGTTG............................................................ read_326298_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 14A7
........aAGGTAGTAGATTGTATAG............................................................... read_150286_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 18
........GAGGTAGTAGATTcTATAGTTa............................................................ read_303932_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 13C7
........GAGGTAGTAGATTGTATAGTTca........................................................... read_46671_0_0_0_1_0_0 MATURE 1 0.00 0 0.00 1 0.01 ca 21
........GAGGTAGTAGATTGTATAtgt............................................................. read_247108_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 tgt 18
........GAGGTAGTAGATTGTATAtTTat........................................................... read_230135_0_0_0_0_0_1 MATURE 1 0.00 0 0.00 1 0.01 at 18T2
............TAGTAGATTGTATAGTT............................................................. read_363060_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 17
........GAGGTAGTAGATcGTATAGTTa............................................................ read_140596_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 12C8
........GAGGTAGTAGATTGTATAGgTGT........................................................... read_401001_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 19G3
........GAGGTAGTAGATTGTATAGag............................................................. read_128143_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 ag 19
........GAGGTAGTAGATTGTATAGTTtaa.......................................................... read_259151_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 taa 21
........GAGGTAGTAGATTGaATAGTTc............................................................ read_91261_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 c 14A6
........GAGGTAGTAGATTGTATAGca............................................................. read_302484_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 ca 19
........aAGGTAGTAGATTGTATAGTTa............................................................ read_149916_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 20
........GAGGTAGTAGAgTGTATAGTT............................................................. read_31119_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 11G9
........tAGGTAGTAGATTGTATAGTaa............................................................ read_34254_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 aa 19
........GAGGTAGTAtATTGTATAGTTG............................................................ read_301098_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 9T12
........GAGGTAGTAGATTGTATAGTaat........................................................... read_77665_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 aat 20
........GAGGTAGTAGATTGTATAGaga............................................................ read_197688_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 aga 19
........GAGGTAaTAGATTGTATAGTTa............................................................ read_205949_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 6A14
.............AGTAGATTGTATAGTTGT........................................................... read_365451_0_0_0_1_0_0 MATURE 1 0.00 0 0.00 1 0.01 18
........cAGGTAGTAGATTGTATAGTTa............................................................ read_251072_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 a 20
........GAGGTAGTAGATTGTATAtTTc............................................................ read_217152_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 c 18T2
........GAGGTAGTtGATTGTATAGTTaa........................................................... read_11068_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 aa 8T12
........GAGGTAGTAGATTGTATAGaatt........................................................... read_294498_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 aatt 19
........GAGGTAGTcGATTGTATAGTT............................................................. read_366417_0_0_0_1_0_0 MATURE 1 0.00 0 0.00 1 0.01 8C12
........GAGGTAGaAGATTGTATAGTTa............................................................ read_178146_0_0_0_0_0_1 MATURE 1 0.00 0 0.00 1 0.01 a 7A13
........GAGGTAGTAGATgGTATAGTT............................................................. read_160734_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 12G8
........GAGGTAGTAGATTGTATAaat............................................................. read_186739_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 aat 18
........GAGGTAGTAGATTGTATAGcta............................................................ read_206715_0_0_0_0_0_1 MATURE 1 0.00 0 0.00 1 0.01 cta 19
........GAGGTAGTAGATTGTATAtTTaa........................................................... read_29971_0_0_0_0_1_0 MATURE 1 0.00 0 0.00 1 0.01 aa 18T2
........GAGGTAGTAGATTaTATAGTTa............................................................ read_191191_0_0_0_0_0_1 MATURE 1 0.00 0 0.00 1 0.01 a 13A7
........GAGGTAGTtGATTGTATAGTTa............................................................ read_374412_0_0_1_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 8T12
........GAGGTAGTAGAcTGTATAGTTG............................................................ read_113945_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 11C10
........GAGGTAGTAGATTGTATAGctat........................................................... read_332734_1_0_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 ctat 19
.........gGGTAGTAGATTGTATAGTT............................................................. read_5817_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 19
........GAGGTAGTAtATTGTATAGTTa............................................................ read_241401_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 9T11
........GAGGTAGTAaATTGTATAGTTa............................................................ read_139287_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 a 9A11
........GAtGTAGTAGATTGTATAGTTc............................................................ read_308175_0_1_0_0_0_0 MATURE 1 0.00 1 0.00 0 0.00 c 2T18
---------- ---------- ----------
39815 28660 11155
(71.98) (28.02)
*** MATURESTAR ***
_________________________________________________________________________________________
ATCAGAGTGAGGTAGTAGATTGTATAGTTGTGGGGTAGTGATTTTACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG REF 13 48633198 - 48633286
TGAGGTAGTAGATTGTATAGTT MATURE 13 48633206 - 48633315 mmu-let-7f -
CTATACAATCTATTGCCTTCCC MATURESTAR 13 48633262 - 48633371 mmu-let-7f* -
_________________________________________________________________________________________
-SEQ- -READ- -CAT- -TOTAL- -TOT%- -REST- -REST%- -ACT- -ACT%- -VAR- -MISMATCH-
................................................................TATACAATCTATTGCCTTCCt..... read_123283_1_2_1_1_0_2 MATURESTAR 7 33.33 4 36.36 3 30.00 t 20
................................................................TATACAATCTATTGCCTTC....... read_16934_0_0_0_0_2_1 MATURESTAR 3 14.29 0 0.00 3 30.00 19
................................................................TATACAATCTATTGCCTTCC...... read_155865_3_0_0_0_0_0 MATURESTAR 3 14.29 3 27.27 0 0.00 20
................................................................TATACAATCTATTGCCTTCCgc.... read_27041_0_0_0_2_0_0 MATURESTAR 2 9.52 0 0.00 2 20.00 gc 20
................................................................TATACAATCTATTGCCTTCCa..... read_130413_1_0_0_1_0_0 MATURESTAR 2 9.52 1 9.09 1 10.00 a 20
................................................................TATACAATCTATTGCCT......... read_20499_0_0_0_1_0_0 MATURESTAR 1 4.76 0 0.00 1 10.00 17
.................................................................ATACAATCTATTGCCTTCC...... read_175342_0_1_0_0_0_0 MATURESTAR 1 4.76 1 9.09 0 0.00 19
................................................................TATACAATCTATTGCCTTCCtt.... read_36362_0_0_1_0_0_0 MATURESTAR 1 4.76 1 9.09 0 0.00 tt 20
..............................................................ACTATACAATCTATTGCCTTC....... read_135280_0_0_1_0_0_0 MATURESTAR 1 4.76 1 9.09 0 0.00 21
---------- ---------- ----------
21 11 10
(52.38) (47.62)
((( SUMMARY )))
-CAT- -REST- -ACT- -TOTAL- -TOTAL%-
---------- ---------- ---------- ---------- ----------
MATURE 28660 11155 39815 99.95%
MATURESTAR 11 10 21 0.05%
---------- ---------- ----------
28671 11165 39836
[END]