K 25
svn:wc:ra_dav:version-url
V 33
/Sting/!svn/ver/3653/trunk/python
END
gatkConfigParser.py
K 25
svn:wc:ra_dav:version-url
V 53
/Sting/!svn/ver/1510/trunk/python/gatkConfigParser.py
END
VCFValidationAnalysis.py
K 25
svn:wc:ra_dav:version-url
V 58
/Sting/!svn/ver/2679/trunk/python/VCFValidationAnalysis.py
END
AlignBams.py
K 25
svn:wc:ra_dav:version-url
V 46
/Sting/!svn/ver/1351/trunk/python/AlignBams.py
END
getBamFilesFromSpreadsheet.py
K 25
svn:wc:ra_dav:version-url
V 63
/Sting/!svn/ver/3090/trunk/python/getBamFilesFromSpreadsheet.py
END
callingProgress.py
K 25
svn:wc:ra_dav:version-url
V 52
/Sting/!svn/ver/1769/trunk/python/callingProgress.py
END
SyzygyCallsFileToVCF.py
K 25
svn:wc:ra_dav:version-url
V 57
/Sting/!svn/ver/2522/trunk/python/SyzygyCallsFileToVCF.py
END
SamWalk.py
K 25
svn:wc:ra_dav:version-url
V 43
/Sting/!svn/ver/154/trunk/python/SamWalk.py
END
pushback_file.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/154/trunk/python/pushback_file.py
END
aln_file.nocvs.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/154/trunk/python/aln_file.nocvs.py
END
CoverageMeta.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/2378/trunk/python/CoverageMeta.py
END
makeIndelMask.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/3410/trunk/python/makeIndelMask.py
END
MergeBamsByKey.py
K 25
svn:wc:ra_dav:version-url
V 51
/Sting/!svn/ver/1000/trunk/python/MergeBamsByKey.py
END
expandedSummaryToVCF.py
K 25
svn:wc:ra_dav:version-url
V 57
/Sting/!svn/ver/1974/trunk/python/expandedSummaryToVCF.py
END
AlignBam.py
K 25
svn:wc:ra_dav:version-url
V 45
/Sting/!svn/ver/1483/trunk/python/AlignBam.py
END
easyRecalQuals.py
K 25
svn:wc:ra_dav:version-url
V 51
/Sting/!svn/ver/1182/trunk/python/easyRecalQuals.py
END
getTargetedGenes.py
K 25
svn:wc:ra_dav:version-url
V 53
/Sting/!svn/ver/3111/trunk/python/getTargetedGenes.py
END
JobDispatcher.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/3170/trunk/python/JobDispatcher.py
END
MergeBAMBatch.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/1659/trunk/python/MergeBAMBatch.py
END
faiReader.py
K 25
svn:wc:ra_dav:version-url
V 46
/Sting/!svn/ver/2022/trunk/python/faiReader.py
END
LogRegression.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/876/trunk/python/LogRegression.py
END
qltout.py
K 25
svn:wc:ra_dav:version-url
V 42
/Sting/!svn/ver/154/trunk/python/qltout.py
END
realignBamByChr.py
K 25
svn:wc:ra_dav:version-url
V 52
/Sting/!svn/ver/3418/trunk/python/realignBamByChr.py
END
collectCalls.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/2299/trunk/python/collectCalls.py
END
WalkLociTest.py
K 25
svn:wc:ra_dav:version-url
V 48
/Sting/!svn/ver/154/trunk/python/WalkLociTest.py
END
vcf2table.py
K 25
svn:wc:ra_dav:version-url
V 46
/Sting/!svn/ver/3330/trunk/python/vcf2table.py
END
aln_file.py
K 25
svn:wc:ra_dav:version-url
V 44
/Sting/!svn/ver/154/trunk/python/aln_file.py
END
ucscRepeatMaskToIntervalList.py
K 25
svn:wc:ra_dav:version-url
V 65
/Sting/!svn/ver/3040/trunk/python/ucscRepeatMaskToIntervalList.py
END
SAM.py
K 25
svn:wc:ra_dav:version-url
V 39
/Sting/!svn/ver/748/trunk/python/SAM.py
END
SpawnValidationJobs.py
K 25
svn:wc:ra_dav:version-url
V 55
/Sting/!svn/ver/154/trunk/python/SpawnValidationJobs.py
END
mergeVCFs.py
K 25
svn:wc:ra_dav:version-url
V 46
/Sting/!svn/ver/2500/trunk/python/mergeVCFs.py
END
picard_utils.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/1182/trunk/python/picard_utils.py
END
makeMetricsFilesForFirehose.py
K 25
svn:wc:ra_dav:version-url
V 64
/Sting/!svn/ver/3090/trunk/python/makeMetricsFilesForFirehose.py
END
create_venn_evals.py
K 25
svn:wc:ra_dav:version-url
V 54
/Sting/!svn/ver/2992/trunk/python/create_venn_evals.py
END
FastaQuals2Fastq.py
K 25
svn:wc:ra_dav:version-url
V 52
/Sting/!svn/ver/154/trunk/python/FastaQuals2Fastq.py
END
farm_commands2.py
K 25
svn:wc:ra_dav:version-url
V 51
/Sting/!svn/ver/3351/trunk/python/farm_commands2.py
END
AnnotateVCFwithMAF.py
K 25
svn:wc:ra_dav:version-url
V 55
/Sting/!svn/ver/2906/trunk/python/AnnotateVCFwithMAF.py
END
pilot2CallingPipeline.py
K 25
svn:wc:ra_dav:version-url
V 58
/Sting/!svn/ver/2750/trunk/python/pilot2CallingPipeline.py
END
StressTestGATK.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/418/trunk/python/StressTestGATK.py
END
JobDispatcherExample.py
K 25
svn:wc:ra_dav:version-url
V 57
/Sting/!svn/ver/3102/trunk/python/JobDispatcherExample.py
END
memo.py
K 25
svn:wc:ra_dav:version-url
V 40
/Sting/!svn/ver/154/trunk/python/memo.py
END
compSNPCalls.py
K 25
svn:wc:ra_dav:version-url
V 48
/Sting/!svn/ver/154/trunk/python/compSNPCalls.py
END
FlatFileTable.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/2377/trunk/python/FlatFileTable.py
END
SamWalkTest.py
K 25
svn:wc:ra_dav:version-url
V 47
/Sting/!svn/ver/154/trunk/python/SamWalkTest.py
END
indelVerboseStats.py
K 25
svn:wc:ra_dav:version-url
V 54
/Sting/!svn/ver/3330/trunk/python/indelVerboseStats.py
END
mergeVCFInfoFields.py
K 25
svn:wc:ra_dav:version-url
V 55
/Sting/!svn/ver/3090/trunk/python/mergeVCFInfoFields.py
END
snpSelector.py
K 25
svn:wc:ra_dav:version-url
V 48
/Sting/!svn/ver/2751/trunk/python/snpSelector.py
END
vcfReader.py
K 25
svn:wc:ra_dav:version-url
V 46
/Sting/!svn/ver/2343/trunk/python/vcfReader.py
END
SimulateReads.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/744/trunk/python/SimulateReads.py
END
EvalMapping.py
K 25
svn:wc:ra_dav:version-url
V 47
/Sting/!svn/ver/154/trunk/python/EvalMapping.py
END
CoverageEval.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/2378/trunk/python/CoverageEval.py
END
BarcodeAnalysis.py
K 25
svn:wc:ra_dav:version-url
V 52
/Sting/!svn/ver/1455/trunk/python/BarcodeAnalysis.py
END
DOCParameter.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/1515/trunk/python/DOCParameter.py
END
ParseDCCSequenceData.py
K 25
svn:wc:ra_dav:version-url
V 57
/Sting/!svn/ver/1201/trunk/python/ParseDCCSequenceData.py
END
madPipelineUtils.py
K 25
svn:wc:ra_dav:version-url
V 53
/Sting/!svn/ver/3351/trunk/python/madPipelineUtils.py
END
RecalQual.py
K 25
svn:wc:ra_dav:version-url
V 46
/Sting/!svn/ver/1060/trunk/python/RecalQual.py
END
Verify1KGArchiveBAMs.py
K 25
svn:wc:ra_dav:version-url
V 57
/Sting/!svn/ver/3201/trunk/python/Verify1KGArchiveBAMs.py
END
MergeEvalMapTabs.py
K 25
svn:wc:ra_dav:version-url
V 52
/Sting/!svn/ver/154/trunk/python/MergeEvalMapTabs.py
END
vcf_b36_to_hg18.py
K 25
svn:wc:ra_dav:version-url
V 52
/Sting/!svn/ver/3260/trunk/python/vcf_b36_to_hg18.py
END
countCoverageWithSamtools.py
K 25
svn:wc:ra_dav:version-url
V 61
/Sting/!svn/ver/154/trunk/python/countCoverageWithSamtools.py
END
generate1KGHapmapVCF.py
K 25
svn:wc:ra_dav:version-url
V 57
/Sting/!svn/ver/2727/trunk/python/generate1KGHapmapVCF.py
END
MergeBAMsUtils.py
K 25
svn:wc:ra_dav:version-url
V 51
/Sting/!svn/ver/1659/trunk/python/MergeBAMsUtils.py
END
igvController.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/3378/trunk/python/igvController.py
END
SimpleSAM.py
K 25
svn:wc:ra_dav:version-url
V 45
/Sting/!svn/ver/154/trunk/python/SimpleSAM.py
END
subsetDbSNPWithrsIDs.py
K 25
svn:wc:ra_dav:version-url
V 57
/Sting/!svn/ver/3352/trunk/python/subsetDbSNPWithrsIDs.py
END
fasta.py
K 25
svn:wc:ra_dav:version-url
V 41
/Sting/!svn/ver/154/trunk/python/fasta.py
END
ValidateGATK.py
K 25
svn:wc:ra_dav:version-url
V 49
/Sting/!svn/ver/1253/trunk/python/ValidateGATK.py
END
samtooltest.sh
K 25
svn:wc:ra_dav:version-url
V 47
/Sting/!svn/ver/154/trunk/python/samtooltest.sh
END
farm_commands.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/2507/trunk/python/farm_commands.py
END
getLaneAndSequenceInfo.py
K 25
svn:wc:ra_dav:version-url
V 59
/Sting/!svn/ver/3193/trunk/python/getLaneAndSequenceInfo.py
END
Gelis2PopSNPs.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/1239/trunk/python/Gelis2PopSNPs.py
END
RefseqLibrary.py
K 25
svn:wc:ra_dav:version-url
V 50
/Sting/!svn/ver/3170/trunk/python/RefseqLibrary.py
END
gatherIndelsToVCF.py
K 25
svn:wc:ra_dav:version-url
V 54
/Sting/!svn/ver/3294/trunk/python/gatherIndelsToVCF.py
END
SpawnMapperJobs.py
K 25
svn:wc:ra_dav:version-url
V 51
/Sting/!svn/ver/154/trunk/python/SpawnMapperJobs.py
END
LogisticRegressionByReadGroup.py
K 25
svn:wc:ra_dav:version-url
V 65
/Sting/!svn/ver/904/trunk/python/LogisticRegressionByReadGroup.py
END
RunPilot2Pipeline.py
K 25
svn:wc:ra_dav:version-url
V 54
/Sting/!svn/ver/1584/trunk/python/RunPilot2Pipeline.py
END
tgtc2sam.py
K 25
svn:wc:ra_dav:version-url
V 44
/Sting/!svn/ver/154/trunk/python/tgtc2sam.py
END
Walker.py
K 25
svn:wc:ra_dav:version-url
V 42
/Sting/!svn/ver/154/trunk/python/Walker.py
END
Geli2GFF.py
K 25
svn:wc:ra_dav:version-url
V 44
/Sting/!svn/ver/888/trunk/python/Geli2GFF.py
END
