Uses of Class
calhoun.util.AbstractTestCase

Packages that use AbstractTestCase

calhoun.analysis.crf.test
calhoun.analysis.crf.test.slow
calhoun.seq.test

Uses of AbstractTestCase in calhoun.analysis.crf.test

Subclasses of AbstractTestCase in calhoun.analysis.crf.test

class	BasicStatsTest
class	CacheProcessorTest
class	CacheProcessorTestRealShort
class	CacheTest
class	ConstraintTest
class	CRFIOTest
class	CRFTest
class	FeatureTest
class	FileInputHandlerTest
class	FunctionEvalTest
class	GammaDistributionsTest
class	GapConjunctionFeaturesTest
class	GeneConstraintsInterval13Test Tests that CRF is working with valid probabilities - the sum of all possible labelings is 1.
class	GTFWriterTest
class	Interval13BaselineTest
class	Interval29BaselineTest
class	LBFGSTest
class	LogprobLookupTest Tests that CRF is working with valid probabilities - the sum of all possible labelings is 1.
class	MatrixOperationsTest
class	MaxentMotifModelTest
class	MaximumExpectedAccuracyTest
class	MultipleSequenceTest
class	NewickTreeManipulationTest
class	NonGradientTest
class	PredictedActualBinaryContingencyTableTest
class	RangeMapExamples
class	RealIOTest
class	RecyclingBufferTest
class	ReferenceBasePredictorTest Tests that CRF is working with valid probabilities - the sum of all possible labelings is 1.
class	SemiMarkovTest
class	SequenceConverterTest
class	ValidPathsTest Tests that CRF is working with valid probabilities - the sum of all possible labelings is 1.

Uses of AbstractTestCase in calhoun.analysis.crf.test.slow

Subclasses of AbstractTestCase in calhoun.analysis.crf.test.slow

class

SlowTestMaxentMotifModel

Uses of AbstractTestCase in calhoun.seq.test

Subclasses of AbstractTestCase in calhoun.seq.test

class	KmerHasherTest
class	RepeatedSubsequenceTest