calhoun.util
Class AbstractTestCase

java.lang.Object
  junit.framework.Assert
      junit.framework.TestCase
          calhoun.util.AbstractTestCase

All Implemented Interfaces:

junit.framework.Test

Direct Known Subclasses:

BasicStatsTest, CacheProcessorTest, CacheProcessorTestRealShort, CacheTest, ConstraintTest, CRFIOTest, CRFTest, FeatureTest, FileInputHandlerTest, FunctionEvalTest, GammaDistributionsTest, GapConjunctionFeaturesTest, GeneConstraintsInterval13Test, GTFWriterTest, Interval13BaselineTest, Interval29BaselineTest, KmerHasherTest, LBFGSTest, LogprobLookupTest, MatrixOperationsTest, MaxentMotifModelTest, MaximumExpectedAccuracyTest, MultipleSequenceTest, NewickTreeManipulationTest, NonGradientTest, PredictedActualBinaryContingencyTableTest, RangeMapExamples, RealIOTest, RecyclingBufferTest, ReferenceBasePredictorTest, RepeatedSubsequenceTest, SemiMarkovTest, SequenceConverterTest, SlowTestMaxentMotifModel, ValidPathsTest

public abstract class AbstractTestCase
extends junit.framework.TestCase

Basic test case with file matching (XML and regular) added as well as improved logging for errors.

Constructor Summary

AbstractTestCase()

AbstractTestCase(java.lang.String arg0)

Method Summary

void	assertArrayEquals(byte[] a, byte[] b)
void	assertArrayEquals(double[] a, double[] b)
void	assertArrayEquals(double[] a, double[] b, double tolerance)
void	assertArrayEquals(int[] a, int[] b)
void	assertBeginsWith(byte[] a, byte[] b)
void	assertEndsWith(byte[] a, byte[] b)
void	assertEquals(byte[] a, byte[] b)
void	assertFilesMatch(java.lang.String expected, java.lang.String actual)
void	assertFlatFileRecordsMatch(java.lang.String expected, java.lang.String actual)
void	assertStringEquals(java.lang.String[] expected, java.util.List l)
void	assertStringEquals(java.lang.String[] expected, java.lang.String[] strings)
void	assertXmlFilesMatch(java.lang.String template, java.lang.String actual)
void	runBare() Overrides the default runTest to provide error logging.

Methods inherited from class junit.framework.TestCase

countTestCases, getName, run, run, setName, toString

Methods inherited from class junit.framework.Assert

assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertFalse, assertFalse, assertNotNull, assertNotNull, assertNotSame, assertNotSame, assertNull, assertNull, assertSame, assertSame, assertTrue, assertTrue, fail, fail

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AbstractTestCase

public AbstractTestCase()

AbstractTestCase

public AbstractTestCase(java.lang.String arg0)

Method Detail

runBare

public void runBare()
             throws java.lang.Throwable

Overrides the default runTest to provide error logging. Using this runBare logs setUp and tearDown errors.

Overrides:

runBare in class junit.framework.TestCase

Throws:

java.lang.Throwable

assertXmlFilesMatch

public void assertXmlFilesMatch(java.lang.String template,
                                java.lang.String actual)
                         throws java.lang.Exception

Throws:

java.lang.Exception

assertArrayEquals

public void assertArrayEquals(byte[] a,
                              byte[] b)

assertArrayEquals

public void assertArrayEquals(double[] a,
                              double[] b)

assertArrayEquals

public void assertArrayEquals(double[] a,
                              double[] b,
                              double tolerance)

assertArrayEquals

public void assertArrayEquals(int[] a,
                              int[] b)

assertBeginsWith

public void assertBeginsWith(byte[] a,
                             byte[] b)

assertEndsWith

public void assertEndsWith(byte[] a,
                           byte[] b)

assertEquals

public void assertEquals(byte[] a,
                         byte[] b)

assertStringEquals

public void assertStringEquals(java.lang.String[] expected,
                               java.util.List l)

assertStringEquals

public void assertStringEquals(java.lang.String[] expected,
                               java.lang.String[] strings)

assertFilesMatch

public void assertFilesMatch(java.lang.String expected,
                             java.lang.String actual)
                      throws java.lang.Exception

Throws:

java.lang.Exception

assertFlatFileRecordsMatch

public void assertFlatFileRecordsMatch(java.lang.String expected,
                                       java.lang.String actual)
                                throws java.lang.Exception

Throws:

java.lang.Exception