Uses of Interface
calhoun.seq.KmerHasher.CharacterHash

Packages that use KmerHasher.CharacterHash

calhoun.seq

Uses of KmerHasher.CharacterHash in calhoun.seq

Fields in calhoun.seq declared as KmerHasher.CharacterHash

static KmerHasher.CharacterHash	KmerHasher.ACGTN Character hash function to use with DNA bases which included the ambiguity code "N".
static KmerHasher.CharacterHash	KmerHasher.ACGTNcomp Character hash function to use with DNA bases which included the ambiguity code "N".
static KmerHasher.CharacterHash	KmerHasher.ACGTother Character hash function to use with DNA bases which included the ambiguity code "N".
static KmerHasher.CharacterHash	KmerHasher.ACGTotherRC Character hash function to use with DNA bases which included the ambiguity code "N".
static KmerHasher.CharacterHash	KmerHasher.DNA Character hash function to use with DNA bases.
static KmerHasher.CharacterHash	KmerHasher.LETTERS Character hash function to use with any letters.

Constructors in calhoun.seq with parameters of type KmerHasher.CharacterHash

KmerHasher(KmerHasher.CharacterHash charHash, int length)
Creates a hash from a given character hash and length.