calhoun.analysis.crf.test
Class Interval29BaselineTest

java.lang.Object
  extended by junit.framework.Assert
      extended by junit.framework.TestCase
          extended by calhoun.util.AbstractTestCase
              extended by calhoun.analysis.crf.test.Interval29BaselineTest
All Implemented Interfaces:
junit.framework.Test

public class Interval29BaselineTest
extends AbstractTestCase


Constructor Summary
Interval29BaselineTest()
           
 
Method Summary
 void compareTwoEquivalentModelsTrainTestSameData(java.lang.String fileModel1, java.lang.String fileModel2, java.lang.String fileData, double tolerance)
           
 void compareTwoEquivalentModelsTrainTestSameDataJustFeatureSums(java.lang.String fileModel1, java.lang.String fileModel2, java.lang.String fileData, double tolerance)
           
 void compareTwoEquivalentModelsTrainTestSameDataWithDifferentStates(java.lang.String fileModel1, java.lang.String fileModel2, java.lang.String fileData, double tolerance)
           
 void testDummy()
           
 void testMarkov13VsMarkov29()
           
 void testMarkov13VsSemiMarkov29()
           
 
Methods inherited from class calhoun.util.AbstractTestCase
assertArrayEquals, assertArrayEquals, assertArrayEquals, assertArrayEquals, assertBeginsWith, assertEndsWith, assertEquals, assertFilesMatch, assertFlatFileRecordsMatch, assertStringEquals, assertStringEquals, assertXmlFilesMatch, runBare
 
Methods inherited from class junit.framework.TestCase
countTestCases, getName, run, run, setName, toString
 
Methods inherited from class junit.framework.Assert
assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertFalse, assertFalse, assertNotNull, assertNotNull, assertNotSame, assertNotSame, assertNull, assertNull, assertSame, assertSame, assertTrue, assertTrue, fail, fail
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

Interval29BaselineTest

public Interval29BaselineTest()
Method Detail

testDummy

public void testDummy()
               throws java.lang.Exception
Throws:
java.lang.Exception

testMarkov13VsSemiMarkov29

public void testMarkov13VsSemiMarkov29()
                                throws java.lang.Exception
Throws:
java.lang.Exception

testMarkov13VsMarkov29

public void testMarkov13VsMarkov29()
                            throws java.lang.Exception
Throws:
java.lang.Exception

compareTwoEquivalentModelsTrainTestSameDataJustFeatureSums

public void compareTwoEquivalentModelsTrainTestSameDataJustFeatureSums(java.lang.String fileModel1,
                                                                       java.lang.String fileModel2,
                                                                       java.lang.String fileData,
                                                                       double tolerance)
                                                                throws java.io.IOException
Throws:
java.io.IOException

compareTwoEquivalentModelsTrainTestSameData

public void compareTwoEquivalentModelsTrainTestSameData(java.lang.String fileModel1,
                                                        java.lang.String fileModel2,
                                                        java.lang.String fileData,
                                                        double tolerance)
                                                 throws java.io.IOException
Throws:
java.io.IOException

compareTwoEquivalentModelsTrainTestSameDataWithDifferentStates

public void compareTwoEquivalentModelsTrainTestSameDataWithDifferentStates(java.lang.String fileModel1,
                                                                           java.lang.String fileModel2,
                                                                           java.lang.String fileData,
                                                                           double tolerance)
                                                                    throws java.io.IOException
Throws:
java.io.IOException