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See:
Description
| Class Summary | |
|---|---|
| CodingStopFeature | |
| EmissionMarkovFeature | |
| EmissionMarkovFeature.MarkovHistory | |
| ESTEdge | |
| ESTExon | |
| ESTIntron | |
| FelsensteinFeatures | |
| GapConjunctionFeatures | |
| GeneConstraints | lmplements basic constraints on gene calls. |
| IntervalPresenceFeatures | |
| IntronLengthFeature | Learns from data an explicit length distribution for introns, and also subtracts out what it would have gotten from just the exponential distribution given by DenseWeightedEdgeFeatures. |
| KmerFeatures | trains on the data and then evaluates to P(state | label) for given Kmers. |
| MaxentMotifFeatures | |
| PfamGenic | |
| PfamPhase | |
| PositionWeightMatrixFeatures | |
| PositionWeightMatrixFeatures.Geometry | |
| PWM_evolution | |
| Enum Summary | |
|---|---|
| KmerFeatures.Cardinality | |
basic features and model for the tricycle13 gene calling model
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