calhoun.analysis.crf.features.supporting
Class MaxentMotifModel

java.lang.Object
  calhoun.analysis.crf.features.supporting.MaxentMotifModel

public class MaxentMotifModel
extends java.lang.Object

Constructor Summary

MaxentMotifModel()

Method Summary

static double[]

trainMaxentDistributionUsingAllPairwiseConstraints(java.util.List<int[]> motifExamples, int span, int nIter, double pseudocount)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MaxentMotifModel

public MaxentMotifModel()

Method Detail

trainMaxentDistributionUsingAllPairwiseConstraints

public static double[] trainMaxentDistributionUsingAllPairwiseConstraints(java.util.List<int[]> motifExamples,
                                                                          int span,
                                                                          int nIter,
                                                                          double pseudocount)