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## Package calhoun.analysis.crf.features.interval29

Class Summary
ESTInterval29 |
FootprintsInterval29 |
GapFeaturesInterval29 |
GeneConstraintsInterval29 | Implements basic constraints on gene calls. 1) Intergenic - start must occur at ATG 2) Splice sites must be canonical GT/AG or GC/AG 3) Exon-stop must be followed by a start codon
Interval29Model |
Interval29Tools |
PWMInterval29 |
ReferenceBasePredictorInterval29 |
ReferenceBasePredictorInterval29Base |
ReferenceBasePredictorNodeOnlyInterval29 |
ReferenceBasePredictorZeroPadInterval29 |
StateLengthLogprobInterval29 |
StateTransitionsInterval29 |

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