
seed used = 140028761

K12                                  ATG TAC ACA CAG ACC CTG TAT GAG TTA AGT CAG GAG GCT GAA CGC CTG TTA CAG CTT TCT CGC CAA CAG TTG CAG TTA CTG GAA AAA ATG CCT CTC TCT GTA CCC GGA GAC GAC GCG CCA CAA CTG GCT TTA CCC TGG AGT CAG CCT AAT ATC GCC GAA CGT CAC GCG ATG CTG AAT AAT GAG TTG CGT AAA ATT TCC CGA CTG GAA ATG GTG CTT GCA ATT GTC GGT ACC ATG AAA GCA GGG AAA TCA ACC ACC ATT AAT GCC ATT GTT GGT ACG GAG GTT CTG CCT AAT CGT AAT CGC CCA ATG ACT GCG CTG CCG ACG CTT ATT CGC CAT ACG CCC GGG CAA AAG GAA CCG GTA CTG CAT TTT TCA CAT GTC GCG CCA ATC GAT TGT TTA ATT CAA CAA TTA CAA CAG CGC CTG CGT GAT TGC GAT ATT AAG CAT CTG ACC GAT GTG CTG GAA ATA GAT AAA GAT ATG CGT GCG CTT ATG CAG CGG ATC GAA AAT GGC GTC GCT TTC GAA AAA TAT TAT CTG GGT GCC CAG CCT ATT TTT CAT TGT CTG AAA AGT TTG AAT GAT TTA GTG CGA CTG GCG AAG GCG CTG GAC GTC GAT TTT CCT TTT TCT GCT TAC GCC GCC ATT GAG CAT ATT CCC GTG ATT GAA GTG GAG TTT GTC CAT CTA GCG GGG CTG GAG AGT TAT CCC GGT CAG TTG ACG TTA CTG GAT ACC CCC GGG CCA AAT GAA GCC GGG CAA CCG CAT CTG CAA AAA ATG CTT AAC CAG CAG CTG GCA CGC GCC TCG GCG GTA CTG GCG GTG CTG GAT TAT ACG CAA CTG AAA TCG ATC TCC GAT GAA GAG GTC CGT GAG GCG ATT TTG GCG GTG GGG CAA TCG GTG CCG CTG TAC GTG CTG GTC AAT AAG TTC GAT CAA CAG GAT CGT AAC AGT GAC GAC GCC GAC CAG GTG CGG GCA CTG ATT TCC GGG ACG CTG ATG AAA GGC TGT ATT ACG CCA CAG CAG ATA TTT CCG GTG TCG TCG ATG TGG GGC TAC CTG GCG AAT CGG GCG CGC TAT GAG TTA GCC AAC AAC GGT AAG TTA CCA CCG CCA GAG CAA CAA CGC TGG GTG GAA GAT TTT GCC CAT GCC GCG CTT GGC AGG CGC TGG CGT CAT GCC GAT CTG GCG GAC CTC GAA CAT ATT CGT CAT GCT GCC GAT CAG TTG TGG GAA GAT TCG CTG TTC GCC CAG CCA ATT CAG GCG TTG CTT CAT GCC GCT TAC GCT AAC GCC TCG TTG TAT GCT CTG CGA TCT GCC GCG CAT AAA CTG TTG AAT TAC GCG CAG CAG GCG CGG GAA TAC CTG GAT TTT CGT GCG CAC GGG TTA AAC GTC GCT TGT GAA CAA TTG CGG CAA AAT ATC CAC CAG ATC GAA GAA AGT TTG CAG CTA TTG CAA CTC AAT CAG GCG CAG GTG AGC GGC GAG ATT AAA CAT GAA ATC GAG CTG GCC CTG ACC TCC GCC AAC CAC TTT CTG CGT CAA CAG CAA GAT GCG CTG AAG GTG CAG TTA GCC GCC TTG TTT CAG GAT GAT TCG GAG CCG TTA AGC GAG ATT CGT ACC CGC TGT GAG ACA CTG TTA CAG ACG GCG CAG AAC ACC ATC AGT CGC GAC TTT ACG CTG CGT TTT GCC GAG CTT GAA TCC ACC CTT TGC CGG GTG TTA ACC GAT GTT ATT CGC CCC ATT GAG CAA CAA GTC AAA ATG GAA TTG AGC GAG TCA GGG TTT CGT CCT GGG TTT CAT TTT CCT GTT TTT CAC GGC GTA GTT CCC CAC TTC AAC ACT CGC CAG CTG TTC AGT GAA GTC ATT TCG CGC CAG GAA GCA ACG GAC GAG CAG AGC ACG CGT TTA GGC GTT GTG CGT GAG ACT TTT TCG CGC TGG TTG AAT CAG CCC GAC TGG GGA CGG GGA AAT GAG AAA TCA CCG ACA GAA ACG GTT GAT TAC AGT GTG TTG CAA CGA GCA TTA AGC GCA GAA GTC GAT CTC TAT TGC CAA CAA ATG GCT AAA GTT CTG GCA GAG CAG GTC GAT GAA TCT GTT ACG GCA GGC ATG AAT ACT TTT TTC GCT GAG TTC GCT TCA TGT TTG ACG GAA TTA CAG ACG CGT TTA CGC GAA AGT CTG GCT CTG CGT CAA CAA AAT GAA TCG GTG GTC AGG CTG ATG CAG CAG CAA TTG CAG CAG ACT GTG ATG ACT CAC GGC TGG ATT TAC ACC GAC GCC CAG CTG TTA CGC GAT GAT ATT CAA ACA CTT TTC ACG GCA GAA CGA TAT 
S2457T                               ATG TAC ACA CAG ACC CTG TAT GAG TTA AGT CAG GAG GCT GAA CGC CTG TTA CAG CTT TCT CGC CAA CAG TTG CAG TTA CTG GAA AAA ATG CCT CTC TCT GTA CCC GGA GAC GAC GCG CCA CAA CTG GCT TTA CCC TGG AGT CAG CCT AAT ATC GCC GAA CGT CAC GCG ATG CTG AAT AAT GAG TTG TGT AAA ATT TCC CGA CTG GAA ATG GTG CTG GCA ATT GTC GGT ACC ATG AAA GCA GGG AAA TCA ACC ACC ATT AAT GCC ATT GTT GGT ACG GAG GTT CTG CCT AAT CGT AAT CGC CCA ATG ACT GCG CTG CCG ACG CTT ATT CGC CAT ACG CCC GGG CAA AAG GAA CCG GTA CTG CAT TTT TCA CAT GTC GCG CCA ATC GAT TGT TTA ATT CAA CAA TTA CAA CAG CGC CTG CGT GAT TGC GAT ATT AAG CAT CTG ACC GAT GTG CTG GAA ATA GAT AAA GAT ATG CGT GCG CTT ATG CAG CGG ATC GAA AAT GGC GTC GCT TTC GAA AAA TAT TAT CTG GGT GCC CAG CCT ATT TTT CAT TGT CTG AAA AGT TTG AAT GAT TTA GTG CGA CTG GCG AAG GCG CTG GAC GTC GAT TTT CCT TTT TCT GCT TAC GCC GCC ATT GAG CAT ATT CCC GTG ATT GAA GTG GAG TTT GTC CAT CTG GCG GGG CTG GAA AGT TAT CCC GGT CAG TTG ACG TTA CTG GAT ACC CCC GGG CCA AAT GAA GCC GGG CAA CCG CAT CTG CAA AAA ATG CTT AAC CAG CAG CTG GCA CGC GCC TCG GCG GTA CTG GCG GTG CTG GAT TAT ACG CAA CTG AAA TCG ATC TCC GAT GAA GAG GTC CGT GAG GCG ATT TTG GCG GTG GGG CAA TCG GTG CCG CTG TAT GTG CTG GTC AAT AAG TTC GAT CAA CAG GAT CGT AAC AGT GAC GAC GCC GAC CAG GTG CGG GCA CTG ATT TCC GGG ACG CTG ATG AAA GGC TGT ATT ACG CCA CAG CAG ATA TTC CCG GTG TCG TCG ATG TGG GGC TAC CTG GCG AAT CGG GCG CGC TAT GAG TTA GCC AAC AAC GGT AAG TTA CCA GCG CCA GAG CAA CAA CGC TGG GTG GAA GAT TTT GCC CAT GCC GCG CTC GGC AGG CGC TGG CGT CAT GCC GAT CTG GCG GAC CTC GAA CAT ATT CGT CAT GCT GCC GAT CAG TTG TGG GAA GAT TCG CTG TTC GCC CAG CCA ATT CAG GCG TTG CTT CAT GCC GCT TAC GCT AAC GCC TCA TTG TAT GCT CTG CGA TCT GCT GCG CAT AAA CTG TTG AAT TAC GCG CAG CAG GCG CGG GAA TAC CTG GAT TTT CGT GCG CAC GGG TTA AAC GTC GCT TGT GAA CAA TTG CGG CAA AAT ATC CAT CAG GTC GAA GAA AGT TTG CAG CTA TTG CAA CTC AAT CAG GCG CAG GTG AGC GGC GAG ATT AAA CAT GAA ATC GAG CTG GCC CTG ACC TCC GCC AAC CAC TTT CTG CGT CAA CAG CAA GAT GCG GTG AAT GCG CAG TTA GCC GCC TTG TTT CAG GAT GAT TCG GAG CCG TTA AGC GAG ATT CGT ACC CGC TGT GAG ACA CTG TTA CAG ACG GCG CAG AAC ACC ATC AGT CGC GAC TTT ACG CTG CGT TTT GCC GAG ATG GAA TCC ACC CTT TGC CGG GTG TTA ACC GAT GTT ATT CGC CCC ATT GAG CAA CAA GTC AAA ATG GAA TTG AGC GAG TCA GGG TTT CGT CCT GGG TTT CAT TTT CCT GTT TTT CAC GGC GTA GTT CCC CAC TTC AAC ACT CGC CAG CTG TTC AGT GAA GTC ATT TCG CGC CAG GAA GCA ACG GAC GAG CAG AGC ACG CGT TTA GGC GTT GTG CGT GAG ACT TTT TCG CGC TGG TTG AAT CAG CCC GAC TGG GGA CGG GGA AAT GAG AAA TCC CCG ACA GAA ACG GTT GAT TAC AGT GTG TTG CAA CGA GCA TTA AGC GCA GAA GTC GAT CTC TAT TGC CAA CAA ATG GCT AAA GTT CTG GCA GAG CAG GTC GAT GAA TCT GTT ACG GCA GGC ATG AAT ACT TTT TTC GCT GAG TTC GCT TCA TGT TTG ACA GAA TTA CAG ACG CGT TTA CGC GAA AGT CTG GCT CTG CGT CAA CAA AAT GAA TCG GTG GTC AGG CTG ATG CAG CAG CAA TTG CAG CAG ACT GTG ATG ACT CAC AGC TGG ATT TAC ACC GAC GCT CAG CTG TTA CGC GAT GAT ATT CAA ACA CTT TTC ACG GCA GAA CGA TAT 
Shig4337                             ATG TAC ACA CAG ACC CTG TAT GAG TTA AGT CAG GAG GCT GAA CGC CTG TTA CAG CTT TCT CGC CAA CAG TTG CAG TTA CTG GAA AAA ATG CCT CTC TCT GTA CCC GGA GAC GAC GCG CCA CAA CTG GCT TTA CCC TGG AGT CAG CCT AAT ATC GCC GAA CGT CAC GCG ATG CTG AAT AAT GAG TTG TGT AAA ATT TCC CGA CTG GAA ATG GTG CTG GCA ATT GTC GGT ACC ATG AAA GCA GGG AAA TCA ACC ACC ATT AAT GCC ATT GTT GGT ACG GAG GTT CTG CCT AAT CGT AAT CGC CCA ATG ACT GCG CTG CCG ACG CTT ATT CGC CAT ACG CCC GGG CAA AAG GAA CCG GTA CTG CAT TTT TCA CAT GTC GCG CCA ATC GAT TGT TTA ATT CAA CAA TTA CAA CAG CGC CTG CGT GAT TGC GAT ATT AAG CAT CTG ACC GAT GTG CTG GAA ATA GAT AAA GAT ATG CGT GCG CTT ATG CAG CGG ATC GAA AAT GGC GTC GCT TTC GAA AAA TAT TAT CTG GGT GCC CAG CCT ATT TTT CAT TGT CTG AAA AGT TTG AAT GAT TTA GTG CGA CTG GCG AAG GCG CTG GAC GTC GAT TTT CCT TTT TCT GCT TAC GCC GCC ATT GAG CAT ATT CCC GTG ATT GAA GTG GAG TTT GTC CAT CTG GCG GGG CTG GAA AGT TAT CCC GGT CAG TTG ACG TTA CTG GAT ACC CCC GGG CCA AAT GAA GCC GGG CAA CCG CAT CTG CAA AAA ATG CTT AAC CAG CAG CTG GCA CGC GCC TCG GCG GTA CTG GCG GTG CTG GAT TAT ACG CAA CTG AAA TCG ATC TCC GAT GAA GAG GTC CGT GAG GCG ATT TTG GCG GTG GGG CAA TCG GTG CCG CTG TAT GTG CTG GTC AAT AAG TTC GAT CAA CAG GAT CGT AAC AGT GAC GAC GCC GAC CAG GTG CGG GCA CTG ATT TCC GGG ACG CTG ATG AAA GGC TGT ATT ACG CCA CAG CAG ATA TTC CCG GTG TCG TCG ATG TGG GGC TAC CTG GCG AAT CGG GCG CGC TAT GAG TTA GCC AAC AAC GGT AAG TTA CCA GCG CCA GAG CAA CAA CGC TGG GTG GAA GAT TTT GCC CAT GCC GCG CTC GGC AGG CGC TGG CGT CAT GCC GAT CTG GCG GAC CTC GAA CAT ATT CGT CAT GCT GCC GAT CAG TTG TGG GAA GAT TCG CTG TTC GCC CAG CCA ATT CAG GCG TTG CTT CAT GCC GCT TAC GCT AAC GCC TCA TTG TAT GCT CTG CGA TCT GCT GCG CAT AAA CTG TTG AAT TAC GCG CAG CAG GCG CGG GAA TAC CTG GAT TTT CGT GCG CAC GGG TTA AAC GTC GCT TGT GAA CAA TTG CGG CAA AAT ATC CAT CAG GTC GAA GAA AGT TTG CAG CTA TTG CAA CTC AAT CAG GCG CAG GTG AGC GGC GAG ATT AAA CAT GAA ATC GAG CTG GCC CTG ACC TCC GCC AAC CAC TTT CTG CGT CAA CAG CAA GAT GCG GTG AAT GCG CAG TTA GCC GCC TTG TTT CAG GAT GAT TCG GAG CCG TTA AGC GAG ATT CGT ACC CGC TGT GAG ACA CTG TTA CAG ACG GCG CAG AAC ACC ATC AGT CGC GAC TTT ACG CTG CGT TTT GCC GAG ATG GAA TCC ACC CTT TGC CGG GTG TTA ACC GAT GTT ATT CGC CCC ATT GAG CAA CAA GTC AAA ATG GAA TTG AGC GAG TCA GGG TTT CGT CCT GGG TTT CAT TTT CCT GTT TTT CAC GGC GTA GTT CCC CAC TTC AAC ACT CGC CAG CTG TTC AGT GAA GTC ATT TCG CGC CAG GAA GCA ACG GAC GAG CAG AGC ACG CGT TTA GGC GTT GTG CGT GAG ACT TTT TCG CGC TGG TTG AAT CAG CCC GAC TGG GGA CGG GGA AAT GAG AAA TCC CCG ACA GAA ACG GTT GAT TAC AGT GTG TTG CAA CGA GCA TTA AGC GCA GAA GTC GAT CTC TAT TGC CAA CAA ATG GCT AAA GTT CTG GCA GAG CAG GTC GAT GAA TCT GTT ACG GCA GGC ATG AAT ACT TTT TTC GCT GAG TTC GCT TCA TGT TTG ACA GAA TTA CAG ACG CGT TTA CGC GAA AGT CTG GCT CTG CGT CAA CAA AAT GAA TCG GTG GTC AGG CTG ATG CAG CAG CAA TTG CAG CAG ACT GTG ATG ACT CAC AGC TGG ATT TAC ACC GAC GCT CAG CTG TTA CGC GAT GAT ATT CAA ACA CTT TTC ACG GCA GAA CGA TAT 
CFT073                               ATG TAC ACA CAG ACC CTG TAT GAG TTA AGT CAG GAG GCT GAA CGC CTG TTA CAG CTT TCT CGC CAA CAG TTG CAG TTA CTG GAA AAA ATG CCT CTC TCT GTA CCC GGA GAC GAT GCG CCA CAA CTG GCT TTA CCC TGG AGT CAG CCT AAT ATC GCC GAA CGT CAC GCG ATG CTG AAT AAT GAG TTG CGT AAA ATT TCC CAG CTG GAA ATG GTG CTG GCG ATT GTC GGT ACC ATG AAA GCA GGG AAA TCA ACC ACC ATT AAT GCC ATT GTT GGT ACG GAG GTT CTG CCT AAT CGC AAT CGC CCA ATG ACT GCG CTG CCA ACG CTT ATT CGC CAT ACG CCC GGG CAA AAA GAA CCG GTA CTG CAT TTT TCA CAT GTC GCG CCA ATC GAC CAT TTA ATT CAA CAA TTA CAA CAG CGC CTG CGT GAT TGC GAT ATT AAG CAT CTG ACC GAT GTG CTG GAA ATA GAT AAA GAT ATG CGT GCG CTT ATG CAG CGG ATC GAA AAT GGC ATC GCT TTC GAA AAA TAT TAT CTG GGT GCT CAA CCT ATT TTT CAT TGT CTG AAA AGT TTG AAT GAT TTG GTG CGA CTG GCG AAG GCG CTG GAC GTC GAT TTT CCT TTT TCT GCT TAC GCC GCC ATT GAG CAT ATT CCC GTG ATT GAA GTG GAG TTT GTC CAT CTG GCG GGG CTG GAG AGT TAT CCC GGT CAG TTG ACG TTA CTG GAT ACC CCC GGG CCA AAT GAA GCC GGG CAA CCG CAT CTG CAA AAA ATG CTT AAC CAG CAG CTG GCA CGC GCC TCG GCG GTA CTG GCG GTG CTG GAT TAT ACG CAA CTG AAA TCG ATC TCC GAT GAA GAG GTC CGT GAG GCA ATT TTG GCG GTG GGG CAA TCG GTG CCG TTG TAT GTG CTG GTC AAT AAG TTC GAT CAA CAG GAT CGT AAC AGT GAC GAC GCT GAC CAG GTG CGG GCA CTG ATT TCC GGG ACG CTG ATG AAA GGC TGT ATT ACG CCA CAG CAG ATA TTT CCG GTG TCG TCG ATG TGG GGC TAC CTG GCG AAT CGG GCG CGC CAT GAG TTA GCC AAC AAC GGT AAG TTA CCC GCG CCA GAG CAA CAA CGC TGG GTG GAA GAT TTT GCC CAT GCC GCG CTC GGC AGG CGC TGG CGT CAT GCC GAT CTG GCG GAC CTC GAA CAT ATT CGC CAT GCT GCC GAT CAG TTG TGG GAA GAT TCG CTG TTC GCC CAG CCA ATT CAG GCG TTG CTT TAT GCC GCT TAC GCT AAC GCC TCG TTG TAT GCT CTG CGA TCT GCC GCG CAT AAA CTG TTG AAT TAC GCG CAG CAG GCG CGG GAA TAC CTG GAT TTT CGT GCG CAC GGG TTA AAC GTC GCT TGT GAA CAA TTG CAG CAA AAT ATC CAT CAG GTC GAA GAA AGT TTG CAG CTA TTG CAA CTC AAT CAG GCG CAG GTG AGC GGC GAG ATT AAA CAT GAA ATC GAG TTG GCC CTG ACC TCC ACC AAC CAC TTT CTG CGT CAA CAG CAA GAT GCG GTG AAT GCG CAG TTA GCC GCG TTG TTT CAG GAT GAC TCG GAG TCG TTA AGT GAG ATG CGT ACC TGC TGT GAG ACA CTG TTA CAG ACG GCG CAG AAC ACC ATC AGT CGC GAC TTT ACG CTG CGC TTT GCC GAG CTT GAG TCC ACC CTT TGC CGG GTG TTA ACC GAT GTT ATT CGC CCC ATT GAG CAA CAA GTC AAA ATG GAA TTG AGT GAG TCT GGG TTT CGT CCT GGG TTT CAT TTT CCT GTT TTT CAC GGC GTA GTT CCC CAC TTC AAC ACC CGC CAG CTG TTC AGT GAA GTC ATT TCG CGC CAG GCA GCA ACG GAC GAG CAG AGC ACG CGT TTA GGC GTT GTG CGT GAG ATT TTT TCG CGC TGG TTG AAT CAG CCC GAC TGG GGA CGG GGA AAT GAG AAA TTC CCG ACA GAG ACG GTT GAT TAC AGT GTG TTG CAG CGA GCA TTA AGC GCA GAA GTC GAT CTT TAT TGC CAA CAA ATG GCT AAA GTT CTG GCA GAG CAG GTC GAT GAA TCT GTT ACG GCA GGC ATG AAT ACT TTT TTC GCT GAG TTC GCT TCA TGT TTG ACG GAA TTA CAG ACG CGT TTA CGC GAA AGT ATG GCT CTG CGT CAA CAA AAT GAA TCG GTG GTC AGG CTG ATG CAA CAG CAA TTG CAG CAG ACT GTG ATG ACT CAC GGC TGG ATT TAC ACC GAC GCT CAG CTG TTA CGC GAT GAT ATT CAA ACA CTT TTC ACG GCA GAA CGA TAT 
O157                                 ATG TAC ACA CAG ACC CTG TAT GAG TTA AGT CAG GAG GCT GAA CGG CTG TTA CAG CTT TCT CGC CAA CAG TTG CAG TTA CTG GAA AAA ATG CCT CTC TCT GTA CCC GGA GAC GAT GCG CCA CAA CTG GCT TTA CCC TGG AGT CAG CCT AAT ATC GCC GAG CGT CAC GCG ATG CTG AAT AAT GAG TTG CGT AAA ATT TCC CGA CTG GAA ATG GTG CTG GCG ATT GTC GGT ACC ATG AAA GCA GGG AAA TCA ACC ACC ATT AAT GCC ATT GTT GGT ACG GAG GTA CTG CCT AAT CGC AAT CGC CCA ATG ACT GCG CTG CCG ACG CTT ATT CGC CAT ACG CCC GGC CAA AAG GAA CCG GTA CTG CAT TTT TCA CAT GTC GCG CCA ATC GAT TGT TTA ATT CAA AAA TTA CAA CAG CGC CTG CGT GAT TGC GAT ATT AAG CAT CTG ACC GAT GTG CTG GAA ATA GAT AAA GAT ATG CGT GCG CTT ATG CAG CGG ATC GAA AAT GGC GTC GCT TTC GAA AAA TAT TAT CTG GGT GCC CAG CCT ATT TTT CAT TGT CTG AAA AGT TTG AAT GAT TTG GTG CGA CTG GCG AAG GCG CTG GAC GTC GAT TTT CCT TTT TCT GCT TAC GCC GCC ATT GAG CAT ATT CCC GTG ATT GAA GTG GAG TTT GTC CAT CTG GCG GGG CTG GAA AGT TAT CCC GGT CAA TTG ACG TTA CTG GAT ACC CCC GGG CCA AAT GAA GCC GGG CAA CCG CAT CTG CAA AAA ATG CTT AAC CAG CAG CTG GCA CGC GCC TCG GCG GTA CTG GCG GTG CTG GAT TAT ACG CAA CTG AAA TCG ATC TCC GAT GAA GAG GTC CGT GAG GCG ATT TTG GCG GTG GGG CAA TCG GTG CCG CTG TAT GTG CTG GTC AAT AAG TTC GAT CAA CAG GAT CGT AAC AGT GAC GAC GCC GAC CAG GTG CGG GCA CTG ATT TCC GGG ACG CTG ATG AAA GGC TGT ATT ACG CCA CAG CAG ATA TTT CCG GTG TCG TCG ATG TGG GGC TAC CTG GCA AAT CGG GCG CGC CAT GAG TTA GCC AAC AAC GGT AAG TTA CCA CCG CCA GAG CAA CAA CGC TGG GTG GAA GAT TTT GCC CAT GCC GCG CTC GGC AGG CGC TGG CGT CAT GCC GAT CTG GCG GAC CTC GAA CAT ATT CGT CAT GCT GCC GAT CAG TTG TGG GAA GAT TCG CTG TTC GCC CAG CCA ATT CAG ATG TTG CTT CAT GCC GCT TAC GCT AAC GCC TCG TTG TAT GCT CTG CGA TCT GCC GCG CAT AAA CTG TTG AAT TAC GCG CAG CAG GCG CGG GAA TAC CTG GAT TTT CGT GCG CAC GGG TTA AAC GTC GCT TGT GAA CAA TTG CGG CAA AAT ATC CAC CAG ATC GAA GAA AGT TTG CAG CTA TTG CAA CTC AAT CAG GCG CAG GTG AGC GGC GAG ATT AAA CAT GAA ATC GAG CTG GCC CTG ACC TCC GCC AAC CAC TTT CTG CGT CAA CAG CAA GAT GCG CTG AAG GTG CAG TTA GCC GCC TTG TTT CAG GAT GAT TCG GAG CCG TTA AGC GAG ATT CGT ACC CGC TGT GAG ACA CTG TTA CAG ACG GCG CAG AAC ACC ATC AGT CGC GAC TTT ACG CTG CGT TTT GCC GAG CTT GAA TCC ACC CTT TGC CGG GTG TTA ACC GAT GTT ATT CGC CCC ATT GAG CAA CAA GTC AAA ATG GAA TTG AGC GAG TCA GGG TTT CGT CCT GGG TTT CAT TTT CCT GTT TTT CAC GGC GTA GTT CCC CAC TTC AAC ACT CGC CAG CTG TTC AGT GAA GTC ATT TCG CGC CAG GAA GCA ACG GAC GAG CAG AGC ACG CGA TTA GGC GTT GTG CGT GAG ACT TTT TCG CGC TGG TTG AAT CAG CCT GAC TGG GGA CGG GGA AAT GAG AAA TCC CCG ACA GAA ACG GTT GAT TAC AGT GTG TTG CAA CGA GCA TTA AGC GCA GAA GTC GAT CTT TAT TGC CAA CAA ATG GCT AAA GTT CTG GCA GAG CAG GTC GAT GAA TCT GTT ACG GCA GGC ATG AAT ACT TTT TTC GCT GAG TTC GCT TCA TGT TTG ACG GAA TTA CAG ACG CGT TTA CGC GAA AGT CTG GCT CTG CGT CAA CAA AAT GAA TCG GTG GTC AGG CTG ATG CAA CAG CAA TTG CAG CAG ACT GTG ATG ACT CAC GGC TGG ATT TAC ACC GAC GCT CAG CTG TTA CGC GAT GAT ATT CAA ACA CTT TTC ACG GCA GAA CGA TAT 
EDL933                               ATG TAC ACA CAG ACC CTG TAT GAG TTA AGT CAG GAG GCT GAA CGG CTG TTA CAG CTT TCT CGC CAA CAG TTG CAG TTA CTG GAA AAA ATG CCT CTC TCT GTA CCC GGA GAC GAT GCG CCA CAA CTG GCT TTA CCC TGG AGT CAG CCT AAT ATC GCC GAG CGT CAC GCG ATG CTG AAT AAT GAG TTG CGT AAA ATT TCC CGA CTG GAA ATG GTG CTG GCG ATT GTC GGT ACC ATG AAA GCA GGG AAA TCA ACC ACC ATT AAT GCC ATT GTT GGT ACG GAG GTA CTG CCT AAT CGC AAT CGC CCA ATG ACT GCG CTG CCG ACG CTT ATT CGC CAT ACG CCC GGC CAA AAG GAA CCG GTA CTG CAT TTT TCA CAT GTC GCG CCA ATC GAT TGT TTA ATT CAA AAA TTA CAA CAG CGC CTG CGT GAT TGC GAT ATT AAG CAT CTG ACC GAT GTG CTG GAA ATA GAT AAA GAT ATG CGT GCG CTT ATG CAG CGG ATC GAA AAT GGC GTC GCT TTC GAA AAA TAT TAT CTG GGT GCC CAG CCT ATT TTT CAT TGT CTG AAA AGT TTG AAT GAT TTG GTG CGA CTG GCG AAG GCG CTG GAC GTC GAT TTT CCT TTT TCT GCT TAC GCC GCC ATT GAG CAT ATT CCC GTG ATT GAA GTG GAG TTT GTC CAT CTG GCG GGG CTG GAA AGT TAT CCC GGT CAA TTG ACG TTA CTG GAT ACC CCC GGG CCA AAT GAA GCC GGG CAA CCG CAT CTG CAA AAA ATG CTT AAC CAG CAG CTG GCA CGC GCC TCG GCG GTA CTG GCG GTG CTG GAT TAT ACG CAA CTG AAA TCG ATC TCC GAT GAA GAG GTC CGT GAG GCG ATT TTG GCG GTG GGG CAA TCG GTG CCG CTG TAT GTG CTG GTC AAT AAG TTC GAT CAA CAG GAT CGT AAC AGT GAC GAC GCC GAC CAG GTG CGG GCA CTG ATT TCC GGG ACG CTG ATG AAA GGC TGT ATT ACG CCA CAG CAG ATA TTT CCG GTG TCG TCG ATG TGG GGC TAC CTG GCA AAT CGG GCG CGC CAT GAG TTA GCC AAC AAC GGT AAG TTA CCA CCG CCA GAG CAA CAA CGC TGG GTG GAA GAT TTT GCC CAT GCC GCG CTC GGC AGG CGC TGG CGT CAT GCC GAT CTG GCG GAC CTC GAA CAT ATT CGT CAT GCT GCC GAT CAG TTG TGG GAA GAT TCG CTG TTC GCC CAG CCA ATT CAG ATG TTG CTT CAT GCC GCT TAC GCT AAC GCC TCG TTG TAT GCT CTG CGA TCT GCC GCG CAT AAA CTG TTG AAT TAC GCG CAG CAG GCG CGG GAA TAC CTG GAT TTT CGT GCG CAC GGG TTA AAC GTC GCT TGT GAA CAA TTG CGG CAA AAT ATC CAC CAG ATC GAA GAA AGT TTG CAG CTA TTG CAA CTC AAT CAG GCG CAG GTG AGC GGC GAG ATT AAA CAT GAA ATC GAG CTG GCC CTG ACC TCC GCC AAC CAC TTT CTG CGT CAA CAG CAA GAT GCG CTG AAG GTG CAG TTA GCC GCC TTG TTT CAG GAT GAT TCG GAG CCG TTA AGC GAG ATT CGT ACC CGC TGT GAG ACA CTG TTA CAG ACG GCG CAG AAC ACC ATC AGT CGC GAC TTT ACG CTG CGT TTT GCC GAG CTT GAA TCC ACC CTT TGC CGG GTG TTA ACC GAT GTT ATT CGC CCC ATT GAG CAA CAA GTC AAA ATG GAA TTG AGC GAG TCA GGG TTT CGT CCT GGG TTT CAT TTT CCT GTT TTT CAC GGC GTA GTT CCC CAC TTC AAC ACT CGC CAG CTG TTC AGT GAA GTC ATT TCG CGC CAG GAA GCA ACG GAC GAG CAG AGC ACG CGA TTA GGC GTT GTG CGT GAG ACT TTT TCG CGC TGG TTG AAT CAG CCT GAC TGG GGA CGG GGA AAT GAG AAA TCC CCG ACA GAA ACG GTT GAT TAC AGT GTG TTG CAA CGA GCA TTA AGC GCA GAA GTC GAT CTT TAT TGC CAA CAA ATG GCT AAA GTT CTG GCA GAG CAG GTC GAT GAA TCT GTT ACG GCA GGC ATG AAT ACT TTT TTC GCT GAG TTC GCT TCA TGT TTG ACG GAA TTA CAG ACG CGT TTA CGC GAA AGT CTG GCT CTG CGT CAA CAA AAT GAA TCG GTG GTC AGG CTG ATG CAA CAG CAA TTG CAG CAG ACT GTG ATG ACT CAC GGC TGG ATT TAC ACC GAC GCT CAG CTG TTA CGC GAT GAT ATT CAA ACA CTT TTC ACG GCA GAA CGA TAT 


CODONML (in paml 3.14, January 2004)    H:\users\mt269\runpaml\NEWdna80\b4109.phy   Model: One dN/dS ratio 
Codon frequencies: F3x4
Site-class models:  PositiveSelection

ns = 6  	ls = 742
# site patterns = 124
   16    8    4   38   12   41    8   23   19   10   13   26    1    7    5
   15   25   18   15    7    3    4    8    3   10    1   21    7    8   18
    7   17    1   13    6    1   22    5    1   18    1    1   12    5    9
    9    3    8   15    1    1    4    1   15    1    1    5   17    2    1
    1   25    3    4    2    6    8    1    8    2    1    5    1    4    1
    1    1    9   10    1    2    1    1    1    1    1    1    1    2    2
    1    1    1    1    1    1    1    1    3    1    1    1    1    1    1
    2    1    1    1    2    1    1    1    1    1    1    1    1    1    1
    1    1    1    1

1       
K12                   ATG TAC ACA CAG ACC CTG TAT GAG TTA AGT GCT GAA CGC CTT TCT CGC CAA TTG AAA CCT CTC GTA CCC GGA GAC GAC GCG CCA TGG AAT ATC GCC GAA CGT CAC CGT ATT TCC CGA GTG CTT GCA GTC GGT GCA GGG TCA GTT ACG GTT CGT ACT CCG CAT GGG AAG CCG TTT GAT TGT CAA GAT TGC AAG ATA CGG GGC GTC TTC GCC CAG TGT TTA CGA CTA GAG CAG AAC TCG GCG CTG TAC TTT GCG TAT CCA CCG CTT AGG CGT GCG CAT TCG GCC CGG CAC ATC CTA AGC GCC CTG AAG GTG GCC CCG AGC ATT CGC CTT GAA TCA ACT GAA CGT ACT CCC TCA CAA CTC ACG CTG CAG GGC GCC 
S2457T                ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... T.. ... ... ... ... ..G ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..G ..A ... ... ... ... ... ..T ..C ... ... ... G.. ..C ... ... ... ... ..A ..T ... ..T G.. ... ... ... G.. ..T .C. ... ... ... ... ... A.G ... ... ... ... ... ... ... ..C ... ... ..A ... ... A.. ..T 
Shig4337              ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... T.. ... ... ... ... ..G ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..G ..A ... ... ... ... ... ..T ..C ... ... ... G.. ..C ... ... ... ... ..A ..T ... ..T G.. ... ... ... G.. ..T .C. ... ... ... ... ... A.G ... ... ... ... ... ... ... ..C ... ... ..A ... ... A.. ..T 
CFT073                ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..T ... ... ... ... ... ... ... ... ... ... ... ... .AG ... ..G ..G ... ... ... ... ... ... ... ... ..C ... ..A ... ... ..A ... ... ..C CA. ... ... ... ... ... ... ... A.. ... ..T ..A ... ..G ... ..G ... ... ... ... ..A T.. ..T ... ... C.. ..C G.. ..C ... ..C ... T.. ... ... .A. ..T G.. ... ... A.. G.. ..T .C. ..G T.. ..T ..G T.. ... ..G ..T ..C .C. ... .T. ... .TC ..G ..T ... A.. ..A ... ..T 
O157                  ... ... ... ... ... ... ... ... ... ... ... ... ..G ... ... ... ... ... ... ... ... ... ... ... ... ..T ... ... ... ... ... ... ..G ... ... ... ... ... ... ... ..G ..G ... ... ... ... ... ... ... ..A ..C ... ... ... ..C ... ... ... ... ... A.. ... ... ... ... ... ... ... ... ... ... ... ..G ... ..G ..A ..A ... ... ... ... ..T ... ..A C.. ... ... ..C ... ... AT. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..A ... ..T ..C ... ..T ... ... ..A ... ..T 
EDL933                ... ... ... ... ... ... ... ... ... ... ... ... ..G ... ... ... ... ... ... ... ... ... ... ... ... ..T ... ... ... ... ... ... ..G ... ... ... ... ... ... ... ..G ..G ... ... ... ... ... ... ... ..A ..C ... ... ... ..C ... ... ... ... ... A.. ... ... ... ... ... ... ... ... ... ... ... ..G ... ..G ..A ..A ... ... ... ... ..T ... ..A C.. ... ... ..C ... ... AT. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..A ... ..T ..C ... ..T ... ... ..A ... ..T 

Codon usage in sequences
--------------------------------------------------------------------------------------------------------------
Phe TTT 18 17 17 18 18 18 | Ser TCT  5  5  5  6  5  5 | Tyr TAT  9 10 10 10  9  9 | Cys TGT  6  7  7  5  6  6
    TTC  8  9  9  9  8  8 |     TCC  5  6  6  5  6  6 |     TAC  9  8  8  8  8  8 |     TGC  3  3  3  4  3  3
Leu TTA 20 20 20 19 19 19 |     TCA  5  5  5  3  4  4 | *** TAA  0  0  0  0  0  0 | *** TGA  0  0  0  0  0  0
    TTG 18 18 18 21 19 19 |     TCG 11 10 10 12 11 11 |     TAG  0  0  0  0  0  0 | Trp TGG  8  8  8  8  8  8
--------------------------------------------------------------------------------------------------------------
Leu CTT 10  7  7  9  9  9 | Pro CCT  7  7  7  7  8  8 | His CAT 16 17 17 18 17 17 | Arg CGT 18 17 17 15 16 16
    CTC  4  5  5  4  4  4 |     CCC  9  9  9 10  8  8 |     CAC  7  6  6  6  7  7 |     CGC 17 17 17 19 17 17
    CTA  2  1  1  1  1  1 |     CCA  8  8  8  8  8  8 | Gln CAA 27 27 27 28 28 28 |     CGA  5  5  5  4  6  6
    CTG 45 46 46 43 47 47 |     CCG  8  7  7  5  8  8 |     CAG 41 41 41 42 39 39 |     CGG  7  7  7  6  8  8
--------------------------------------------------------------------------------------------------------------
Ile ATT 23 23 23 23 23 23 | Thr ACT  6  6  6  4  6  6 | Asn AAT 18 19 19 19 18 18 | Ser AGT 10 10 10 12 10 10
    ATC  8  7  7  8  8  8 |     ACC 12 12 12 14 12 12 |     AAC  9  9  9  9  9  9 |     AGC  5  6  6  3  5  5
    ATA  2  2  2  2  2  2 |     ACA  4  5  5  4  4  4 | Lys AAA 15 15 15 16 16 16 | Arg AGA  0  0  0  0  0  0
Met ATG 16 17 17 18 17 17 |     ACG 16 15 15 16 16 16 |     AAG  6  5  5  4  6  6 |     AGG  2  2  2  2  2  2
--------------------------------------------------------------------------------------------------------------
Val GTT  9  9  9  9  8  8 | Ala GCT 13 15 15 16 14 14 | Asp GAT 27 27 27 26 28 28 | Gly GGT  5  5  5  5  5  5
    GTC 13 14 14 13 13 13 |     GCC 23 21 21 18 22 22 |     GAC 11 11 11 12 10 10 |     GGC  9  8  8  9 10 10
    GTA  4  4  4  4  5  5 |     GCA 10 10 10 11 10 10 | Glu GAA 30 31 31 27 30 30 |     GGA  3  3  3  3  3  3
    GTG 19 19 19 19 19 19 |     GCG 24 26 26 27 23 23 |     GAG 24 23 23 26 24 24 |     GGG 10 10 10 10  9  9
--------------------------------------------------------------------------------------------------------------

Codon position x base (3x4) table for each sequence.

#1: K12            
position  1:    T:0.16846    C:0.31132    A:0.20485    G:0.31536
position  2:    T:0.29515    C:0.22372    A:0.33558    G:0.14555
position  3:    T:0.26954    C:0.20485    A:0.18194    G:0.34367

#2: S2457T         
position  1:    T:0.16981    C:0.30593    A:0.20620    G:0.31806
position  2:    T:0.29380    C:0.22507    A:0.33558    G:0.14555
position  3:    T:0.27089    C:0.20350    A:0.18329    G:0.34232

#3: Shig4337       
position  1:    T:0.16981    C:0.30593    A:0.20620    G:0.31806
position  2:    T:0.29380    C:0.22507    A:0.33558    G:0.14555
position  3:    T:0.27089    C:0.20350    A:0.18329    G:0.34232

#4: CFT073         
position  1:    T:0.17251    C:0.30323    A:0.20755    G:0.31671
position  2:    T:0.29650    C:0.22372    A:0.33827    G:0.14151
position  3:    T:0.27224    C:0.20350    A:0.17520    G:0.34906

#5: O157           
position  1:    T:0.16712    C:0.31132    A:0.20755    G:0.31402
position  2:    T:0.29650    C:0.22237    A:0.33558    G:0.14555
position  3:    T:0.26954    C:0.20216    A:0.18329    G:0.34501

#6: EDL933         
position  1:    T:0.16712    C:0.31132    A:0.20755    G:0.31402
position  2:    T:0.29650    C:0.22237    A:0.33558    G:0.14555
position  3:    T:0.26954    C:0.20216    A:0.18329    G:0.34501

Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT     106 | Ser S TCT      31 | Tyr Y TAT      57 | Cys C TGT      37
      TTC      51 |       TCC      34 |       TAC      49 |       TGC      19
Leu L TTA     117 |       TCA      26 | *** * TAA       0 | *** * TGA       0
      TTG     113 |       TCG      65 |       TAG       0 | Trp W TGG      48
------------------------------------------------------------------------------
Leu L CTT      51 | Pro P CCT      44 | His H CAT     102 | Arg R CGT      99
      CTC      26 |       CCC      53 |       CAC      39 |       CGC     104
      CTA       7 |       CCA      48 | Gln Q CAA     165 |       CGA      31
      CTG     274 |       CCG      43 |       CAG     243 |       CGG      43
------------------------------------------------------------------------------
Ile I ATT     138 | Thr T ACT      34 | Asn N AAT     111 | Ser S AGT      62
      ATC      46 |       ACC      74 |       AAC      54 |       AGC      30
      ATA      12 |       ACA      26 | Lys K AAA      93 | Arg R AGA       0
Met M ATG     102 |       ACG      94 |       AAG      32 |       AGG      12
------------------------------------------------------------------------------
Val V GTT      52 | Ala A GCT      87 | Asp D GAT     163 | Gly G GGT      30
      GTC      80 |       GCC     127 |       GAC      65 |       GGC      54
      GTA      26 |       GCA      61 | Glu E GAA     179 |       GGA      18
      GTG     114 |       GCG     149 |       GAG     144 |       GGG      58
------------------------------------------------------------------------------


Codon position x base (3x4) table, overall

position  1:    T:0.16914    C:0.30818    A:0.20665    G:0.31604
position  2:    T:0.29537    C:0.22372    A:0.33603    G:0.14488
position  3:    T:0.27044    C:0.20328    A:0.18172    G:0.34456

Codon frequencies under model, for use in evolver:
  0.01399163  0.01051696  0.00940135  0.01782655
  0.01059746  0.00796570  0.00712072  0.01350208
  0.01591747  0.01196455  0.00000000  0.00000000
  0.00686281  0.00515851  0.00000000  0.00874382
  0.02549338  0.01916238  0.01712969  0.03248077
  0.01930906  0.01451387  0.01297427  0.02460140
  0.02900236  0.02179994  0.01948746  0.03695151
  0.01250436  0.00939904  0.00840201  0.01593163
  0.01709469  0.01284941  0.01148638  0.02178011
  0.01294776  0.00973233  0.00869995  0.01649657
  0.01944764  0.01461804  0.01306740  0.02477798
  0.00838485  0.00630256  0.00563400  0.01068302
  0.02614372  0.01965122  0.01756667  0.03330936
  0.01980163  0.01488412  0.01330525  0.02522899
  0.02974221  0.02235606  0.01998459  0.03789415
  0.01282335  0.00963881  0.00861635  0.01633805



Nei & Gojobori 1986. dN/dS (dN, dS)
(Note: This matrix is not used in later m.l. analysis.
Use runmode = -2 for ML pairwise comparison.)

K12                 
S2457T               0.2132 (0.0050 0.0237)
Shig4337             0.2132 (0.0050 0.0237)-1.0000 (0.0000 0.0000)
CFT073               0.1808 (0.0122 0.0676) 0.1676 (0.0110 0.0657) 0.1676 (0.0110 0.0657)
O157                 0.0591 (0.0024 0.0401) 0.1994 (0.0074 0.0373) 0.1994 (0.0074 0.0373) 0.2099 (0.0131 0.0625)
EDL933               0.0591 (0.0024 0.0401) 0.1994 (0.0074 0.0373) 0.1994 (0.0074 0.0373) 0.2099 (0.0131 0.0625)-1.0000 (0.0000 0.0000)


TREE #  1:  ((1, (2, 3)), (4, (5, 6)));   MP score: 78
This is a rooted tree.  Please check!
lnL(ntime: 10  np: 15):  -3465.803591     +0.000000
   7..8     8..1     8..9     9..2     9..3     7..10   10..4    10..11   11..5    11..6  
  0.00649  0.01060  0.01891  0.00000  0.00000  0.00287  0.06246  0.01722  0.00000  0.00000  4.50010  0.93689  0.00000  0.00000  5.03553
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =   0.11856

((1: 0.010599, (2: 0.000004, 3: 0.000004): 0.018910): 0.006490, (4: 0.062460, (5: 0.000004, 6: 0.000004): 0.017220): 0.002868);

((K12: 0.010599, (S2457T: 0.000004, Shig4337: 0.000004): 0.018910): 0.006490, (CFT073: 0.062460, (O157: 0.000004, EDL933: 0.000004): 0.017220): 0.002868);

Detailed output identifying parameters

kappa (ts/tv) =  4.50010


dN/dS for site classes (K=3)

p:   0.93689  0.00000  0.06311
w:   0.00000  1.00000  5.03553

dN & dS for each branch

 branch           t        S        N    dN/dS       dN       dS   S*dS   N*dN

   7..8       0.006    683.8   1542.2   0.3178   0.0013   0.0041    2.8    2.0
   8..1       0.011    683.8   1542.2   0.3178   0.0021   0.0067    4.6    3.3
   8..9       0.019    683.8   1542.2   0.3178   0.0038   0.0120    8.2    5.9
   9..2       0.000    683.8   1542.2   0.3178   0.0000   0.0000    0.0    0.0
   9..3       0.000    683.8   1542.2   0.3178   0.0000   0.0000    0.0    0.0
   7..10      0.003    683.8   1542.2   0.3178   0.0006   0.0018    1.2    0.9
  10..4       0.062    683.8   1542.2   0.3178   0.0125   0.0395   27.0   19.4
  10..11      0.017    683.8   1542.2   0.3178   0.0035   0.0109    7.4    5.3
  11..5       0.000    683.8   1542.2   0.3178   0.0000   0.0000    0.0    0.0
  11..6       0.000    683.8   1542.2   0.3178   0.0000   0.0000    0.0    0.0


Positively selected sites (*: P>95%; **: P>99%)

            Pr(w>1)     post mean +- SE for w

    63 R      1.000**       5.035
    67 R      1.000**       5.036
   130 C      1.000**       5.036
   134 Q      1.000**       5.036
   168 V      1.000**       5.036
   346 Y      1.000**       5.036
   356 P      1.000**       5.036
   405 A      1.000**       5.036
   408 H      1.000**       5.035
   452 R      1.000**       5.035
   458 I      1.000**       5.036
   487 A      1.000**       5.036
   498 L      1.000**       5.036
   499 K      1.000**       5.036
   500 V      1.000**       5.036
   512 P      1.000**       5.035
   516 I      1.000**       5.035
   519 R      1.000**       5.036
   542 L      1.000**       5.036
   600 E      1.000**       5.036
   615 T      1.000**       5.035
   632 S      1.000**       5.036
   695 L      1.000**       5.035
   720 G      1.000**       5.036


Bayes Empirical Bayes (BEB) analysis
Positively selected sites (*: P>95%; **: P>99%)

            Pr(w>1)     post mean +- SE for w

    63 R      0.507         3.808 +- 3.591
    67 R      0.579         4.330 +- 3.614
   130 C      0.932         6.688 +- 2.420
   134 Q      0.586         4.379 +- 3.609
   168 V      0.540         4.047 +- 3.610
   346 Y      0.585         4.366 +- 3.605
   356 P      0.923         6.631 +- 2.477
   405 A      0.925         6.646 +- 2.462
   458 I      0.935         6.704 +- 2.404
   487 A      0.548         4.107 +- 3.612
   498 L      0.930         6.678 +- 2.431
   499 K      0.910         6.550 +- 2.548
   500 V      0.910         6.552 +- 2.546
   519 R      0.565         4.229 +- 3.612
   542 L      0.785         5.743 +- 3.206
   600 E      0.569         4.252 +- 3.613
   632 S      0.564         4.219 +- 3.613
   695 L      0.510         3.830 +- 3.596
   720 G      0.553         4.136 +- 3.612



The grid (see ternary graph for p0-p1)

w0:   0.050  0.150  0.250  0.350  0.450  0.550  0.650  0.750  0.850  0.950
w2:   1.500  2.500  3.500  4.500  5.500  6.500  7.500  8.500  9.500 10.500


Posterior on the grid

w0:   0.961  0.039  0.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000
w2:   0.004  0.017  0.043  0.088  0.148  0.188  0.186  0.151  0.107  0.068

Posterior for p0-p1 (see the ternary graph)

 0.000
 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.097
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.003 0.062 0.834

sum of density on p0-p1 =   1.000000
