
seed used = 140017965

K12                                  ATG AAA AAA CAA ACC CAG CTG TTG AGT GCA TTA GCG TTA AGT GTC GGG TTA ACT CTC TCG GCG TCA TTT CAG GCC GTC GCG TCG ATT CCA GGC CAG GTT GCC GAT CAG GCC CCT CTC CCC AGT CTG GCT CCA ATG CTG GAA AAA GTG CTT CCG GCA GTG GTG AGC GTA CGG GTG GAA GGA ACG GCC AGT CAG GGA CAG AAA ATC CCG GAA GAA TTC AAA AAG TTT TTT GGT GAT GAT TTA CCG GAT CAA CCT GCA CAA CCC TTC GAA GGT TTA GGC TCC GGT GTC ATC ATC AAC GCC AGT AAA GGC TAT GTG CTG ACC AAC AAC CAT GTG ATT AAT CAG GCA CAG AAA ATC AGT ATT CAG CTC AAT GAT GGG CGC GAG TTT GAT GCA AAA CTG ATT GGT AGC GAT GAC CAG AGC GAT ATC GCC CTG TTA CAA ATT CAA AAC CCG AGC AAA TTA ACG CAA ATC GCT ATT GCC GAC TCC GAT AAA TTG CGC GTC GGT GAT TTT GCC GTA GCG GTC GGT AAC CCA TTT GGC CTT GGG CAA ACC GCC ACC TCT GGC ATT GTT TCC GCA TTA GGC CGC AGC GGG TTG AAT CTT GAA GGT CTG GAA AAC TTT ATC CAG ACA GAT GCT TCC ATT AAC CGC GGT AAC TCC GGC GGT GCA CTA TTA AAC CTT AAC GGT GAG TTA ATT GGC ATC AAC ACT GCA ATC CTT GCG CCT GGC GGC GGG AGC GTC GGG ATT GGA TTT GCC ATC CCC AGT AAT ATG GCG CGA ACA CTG GCG CAG CAG CTT ATC GAC TTT GGT GAA ATC AAA CGC GGT TTG TTA GGC ATC AAA GGC ACC GAG ATG AGT GCC GAT ATC GCC AAA GCC TTC AAC CTT GAC GTG CAG CGT GGC GCG TTT GTC AGC GAA GTG TTG CCA GGT TCT GGC TCG GCA AAA GCG GGC GTC AAA GCG GGC GAT ATT ATT ACC AGC CTC AAC GGC AAA CCG CTG AAT AGC TTT GCT GAG TTG CGC TCT CGT ATC GCG ACC ACC GAG CCG GGC ACG AAA GTG AAG CTT GGC CTG CTG CGT AAC GGC AAA CCA CTG GAA GTA GAA GTG ACG CTC GAT ACC AGC ACC TCT TCG TCG GCC AGC GCT GAA ATG ATC ACG CCA GCG CTG GAA GGT GCA ACG TTG AGC GAT GGT CAG CTA AAA GAT GGC GGC AAA GGT ATT AAA ATC GAT GAA GTT GTC AAA GGA AGC CCA GCT GCT CAG GCT GGC TTG CAA AAA GAC 
Shig4337                             ATG AAA AAA CAA ACC CAG CTG TTG AGT GCA TTA GCG TTA AGT GCC GGG TTA ACT CTC TCG GCG TCA TTT CAG GCC GTC GCG TCG ATT CCA GGC CAG GTT GCC GAT CAG GCC CCT CTC CCC AGT CTG GCT CCA ATG CTG GAA AAA GTG CTT CCG GCA GTG GTG AGC GTA CGG GTG GAA GGA ACG GCC AGT CAG GGA CAG AAA ATC CCG GAA GAA TTC AAA AAG TTT TTT GGT GAT GAT TTA CCG GAT CAA CCT GCA CAA CCC TTC GAA GGT TTA GGT TCC GGT GTC ATC ATC AAC GCC AGT AAA GGC TAT GTG CTG ACC AAC AAC CAT GTG ATT AAT CAG GCA CAG AAA ATC AGT ATT CAG CTC AAT GAT GGG CGC GAG TTT GAT GCA AAA CTG ATT GGT AGC GAT GAC CAG AGC GAT ATC GCC CTG TTA CAA ATT CAA AAC CCG AGC AAA TTA ACG CAA ATC GCT ATT GCC GAC TCC GAT AAA TTG CGC GTC GGT GAT TTT GCC GTA GCG GTC GGT AAC CCA TTT GGC CTT GGG CAA ACC GCC ACC TCT GGC ATT GTT TCC GCA TTA GGC CGC AGC GGG TTG AAT CTT GAA GGT CTG GAA AAC TTT ATC CAG ACA GAT GCT TCC ATT AAC CGC GGT AAC TCC GGC GGT GCA CTA TTA AAC CTT AAC GGT GAG TTA ATT GGC ATC AAC ACT GCA ATC CTT GCG CCT GGC GGC GGG AGC GTC GGG ATT GGA TTT GCC ATC CCC AGT AAT ATG GCG CGA ACA CTG GCG CAG CAG CTT ATC GAC TTT GGT GAA ATC AAA CGC GGT TTG TTA GGC ATC AAA GGC ACC GAG ATG AGT GCC GAT ATC GCC AAA GCC TTC AAC CTT GAC GTG CAG CGT GGC GTG TTT GTC AGC GAA GTG TTG CCA AGT TCT GGC TCA GCG AAA GCG GGC GTC AAA GCG GGC GAT ATT ATT ACC AGC CTC AAC GGC AAA CCG CTG AAT AGC TTT GCT GAG TTG CGC TCT CGT ATC GCG ACT ACA GAG CCG GGC ACG AAA GTG AAG CTT GGC CTG CTG CGT AAC GGC AAA CCA CTG GAA GTA GAA GTG ACG CTT GAT ACC AGC ACC TCT TCG TCG GCC AGC GCT GGA AGG TGC AAC --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- GTT GAG CGA TGG TCA --- --- GCT AAA AGA TGG CGG CAA AGG TAT 
CFT073                               ATG AAA AAA CAA ACC CAG CTG TTG AGT GCA TTA GCG TTA AGT GTC GGG TTA ACT CTC TCG GCG TCA TTT CAG GCC GTC GCG TCG ATT CCA GGC CAG GTT GCC GAT CAG GCC CCC CTC CCC AGT CTG GCT CCA ATG CTG GAA AAA GTG CTT CCG GCA GTG GTG AGC GTA CGG GTG GAA GGA ACG GCC AGT CAG GGA CAG AAA ATC CCG GAA GAA TTC AAA AAG TTT TTT GGT GAT GAT TTA CCG GAT CAA CCT GCA CAA CCC TTC GAA GGT TTA GGC TCC GGT GTC ATC ATC AAC GCC AAT AAA GGC TAT GTG CTG ACC AAC AAC CAT GTG ATT AAT CAG GCA CAG AAA ATC AGT ATT CAG CTC AAT GAT GGG CGC GAG TTT GAT GCA AAA CTG ATT GGT AGC GAT GAC CAG AGC GAT ATC GCC CTG TTG CAA ATT CAA AAC CCG AGC AAA TTA ACG CAA ATC GCT ATT GCC GAC TCC GAT AAA TTG CGC GTC GGT GAT TTT GCC GTG GCG GTC GGT AAC CCA TTT GGC CTT GGG CAA ACC GCC ACC TCT GGC ATT ATA TCC GCA TTA GGC CGC AGC GGG TTG AAT CTT GAA GGT CTG GAA AAC TTT ATC CAG ACA GAT GCT TCC ATT AAC CGC GGT AAC TCC GGC GGT GCA CTG TTA AAC CTT AAC GGT GAG TTA ATT GGC ATC AAC ACT GCA ATC CTT GCG CCT GGC GGC GGT AGC GTC GGG ATT GGA TTT GCC ATT CCC AGT AAT ATG GCG CGA ACA CTG GCG CAG CAG CTT ATC GAC TTT GGA GAA ATC AAA CGC GGC CTG TTA GGC ATC AAA GGC ACC GAG ATG AGT GCC GAT ATC GCC AAA GCC TTC AAC CTT GAC GTG CAG CGT GGC GCG TTT GTC AGC GAA GTG TTG CCA GGT TCT GGC TCG GCA AAA GCG GGC GTC AAA GCG GGC GAT ATT ATT ACC AGC CTC AAC GGC AAA CCG CTG AAT AGC TTT GCT GAG TTG CGC TCT CGT ATC GCG ACC ACC GAG CCG GGC ACA AAA GTG AAG CTT GGC CTG CTG CGT AAC GGC AAA CCA CTG GAA GTA GAA GTG ACG CTC GAT ACC AGC ACC TCT TCG TCG GCC AGC GCT GAA ATG ATC ACG CCA GCG CTG GAA GGT GCA ACG TTG AGC GAT GGT CAG CTA AAA GAT GGT GGC AAA GGT ATT AAG ATC GAT GAG GTT GTC AAA GGA AGC CCA GCT GCT CAG GCT GGC TTG CAA AAA GAC 
O157                                 ATG AAA AAA CAA ACC CAG CTG TTG AGT GCA TTA GCG TTA AGT GTC GGG TTA ACT CTC TCG GCG TCA TTT CAG GCC GTT GCG TCG ATC CCA GGC CAG GTT GCC GAT CAG GCC CCC CTC CCC AGT CTG GCT CCA ATG CTG GAA AAA GTG CTT CCG GCA GTG GTG AGC GTA CGG GTG GAA GGA ACG GCC AGT CAG GGA CAG AAA ATC CCG GAA GAA TTC AAA AAG TTT TTT GGT GAT GAT TTA CCG GAT CAA CCT GCA CAA CCC TTC GAA GGT TTA GGC TCC GGT GTC ATC ATC AAC GCC AGT AAA GGC TAT GTG CTG ACC AAC AAC CAT GTG ATT AAT CAG GCA CAG AAA ATC AGT ATT CAG CTC AAT GAT GGG CGC GAG TTT GAT GCA AAA CTG ATT GGT AGC GAT GAC CAG AGC GAT ATC GCC CTG TTG CAA ATT CAA AAC CCG AGC AAA TTA ACG CAA ATC GCT ATT GCC GAC TCC GAT AAA TTG CGC GTC GGT GAT TTT GCC GTG GCG GTC GGT AAC CCA TTT GGC CTT GGG CAA ACC GCC ACC TCT GGC ATT GTT TCC GCA TTA GGA CGC AGC GGG TTG AAT CTT GAA GGT CTG GAA AAC TTT ATC CAG ACA GAT GCT TCC ATT AAC CGC GGT AAC TCC GGC GGT GCA CTG TTA AAC CTT AAC GGT GAG TTA ATT GGC ATC AAC ACT GCA ATC CTT GCG CCT GGC GGC GGG AGC GTC GGA ATT GGA TTT GCC ATC CCC AGT AAT ATG GCG CGA ACA CTG GCG CAG CAG CTT ATC GAC TTT GGT GAA ATC AAA CGC GGT TTG TTA GGC ATC AAA GGC ACC GAG ATG AGT GCC GAT ATC GCC AAA GCC TTC AAC CTT GAC GTG CAG CGT GGC GCG TTT GTC AGC GAA GTG TTG CCA GGT TCT GGC TCG GCG AAA GCG GGC GTC AAA ACG GGC GAT ATT ATT ACC AGC CTC AAC GGC AAA CCG CTG AAT AGC TTT GCT GAG TTG CGC TCT CGT ATC GCG ACC ACC GAG CCG GGC ACG AAA GTG AAG CTT GGC CTG CTG CGT AAC GGC AAA CCA CTG GAA GTA GAA GTG ACG CTC GAT ACC AGC ACC TCT TCG TCG GCC AGC GCT GAA ATG ATC ACG CCA GCG CTG GAA GGT GCA ACG TTG AGC GAT GGT CAG CTA AAA GAT GGC GGC AAA GGT ATT AAA ATC GAT GAA GTT GTC AAA GGA AGC CCA GCT GCT CAG GCT GGC TTG CAA AAA GAC 


CODONML (in paml 3.14, January 2004)    H:\users\mt269\runpaml\NEWdna80\b3234.phy   Model: One dN/dS ratio 
Codon frequencies: F3x4
Site-class models:  PositiveSelection

ns = 4  	ls = 411
# site patterns = 112
    4   18    8    8   14   12    5    7    8   10    9    1    4    2    4
    4    1   11   14    1    1    5   18    2   14    1    3    6   11   10
    8    6   11    2    1    3    3   14    3    2   10    2    1    5    6
   14    1    1    1   11    5    6    5    4    1    1    4    1    1    2
    1    1    1    1    1    1    1    1    3    1    1    1    1    1    1
    1    1    1    1    1    1    1    2    1    1    1    3    1    1    1
    1    3    1    1    2    1    1    1    1    1    1    1    1    1    1
    1    1    1    1    1    1    1

K12                                  ATG AAA CAA ACC CAG CTG TTG AGT GCA TTA GCG GTC GGG ACT CTC TCG TCA TTT GCC GTC ATT CCA GGC GTT GAT CCT CCC GCT GAA GTG CTT CCG AGC GTA CGG GGA ACG ATC TTC AAG GGT CCT GGC TCC GTC AAC AGT TAT CAT ATT AAT CGC GAG GAC TTA GTA TCT GTT GGC ACA CTA GGG GGG ATC CGA GGT GGT TTG CGT GCG GGT TCG GCA GCG ACC ACC ACG CTC GAA ATG ATC ACG CCA GCG CTG GAA GGT GCA ACG TTG AGC GAT CAG CTA AAA GGC GGC ATT AAA ATC GAA GTC AAA GGA AGC GCT CAG GCT GGC TTG AAA GAC 
Shig4337                             ... ... ... ... ... ... ... ... ... ... ... .C. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..T ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... .T. A.. ..A ..G ... ..T ..A ... ..T .G. .G. TG. .AC --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- .AG CG. T.G TCA --- A.A AGA T.G CG. .GG T.T 
CFT073                               ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..C ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... .A. ... ... ... ... ... ... ... ..G ..G ... A.A ... ... ..G ..T ... ..T ... ..A ..C C.. ... ... ... ... ... ... ... ... ..A ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..T ... ... ..G ... ..G ... ... ... ... ... ... ... ... ... ... ... 
O157                                 ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..T ..C ... ... ... ... ..C ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..G ..G ... ... ..A ... ..G ... ..A ... ... ... ... ... ... ... ... ... ..G A.. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... 



Codon usage in sequences
--------------------------------------------------------------------------------------
Phe TTT 11 11 11 11 | Ser TCT  4  4  4  4 | Tyr TAT  1  2  1  1 | Cys TGT  0  0  0  0
    TTC  3  3  3  3 |     TCC  5  5  5  5 |     TAC  0  0  0  0 |     TGC  0  1  0  0
Leu TTA 11 11 10 10 |     TCA  1  3  1  1 | *** TAA  0  0  0  0 | *** TGA  0  0  0  0
    TTG  8  6  8  9 |     TCG  5  4  5  5 |     TAG  0  0  0  0 | Trp TGG  0  2  0  0
--------------------------------------------------------------------------------------
Leu CTT  8  9  8  8 | Pro CCT  3  3  2  2 | His CAT  1  1  1  1 | Arg CGT  3  3  3  3
    CTC  5  4  5  5 |     CCC  3  3  4  4 |     CAC  0  0  0  0 |     CGC  6  6  6  6
    CTA  2  1  1  1 |     CCA  7  5  7  7 | Gln CAA  8  8  8  8 |     CGA  1  2  1  1
    CTG 13 12 15 14 |     CCG  6  6  6  6 |     CAG 16 14 16 16 |     CGG  1  2  1  1
--------------------------------------------------------------------------------------
Ile ATT 13 12 14 12 | Thr ACT  2  3  2  2 | Asn AAT  5  5  6  5 | Ser AGT  8  9  7  8
    ATC 17 15 16 18 |     ACC 10  8 10 10 |     AAC 14 15 14 14 |     AGC 13 11 13 13
    ATA  0  0  1  0 |     ACA  2  3  3  2 | Lys AAA 23 19 22 23 | Arg AGA  0  1  0  0
Met ATG  5  4  5  5 |     ACG  6  4  5  7 |     AAG  2  2  3  2 |     AGG  0  2  0  0
--------------------------------------------------------------------------------------
Val GTT  3  3  2  4 | Ala GCT  8  6  8  8 | Asp GAT 17 14 17 17 | Gly GGT 16 13 16 16
    GTC  9  7  9  8 |     GCC 14 15 14 14 |     GAC  5  4  5  5 |     GGC 23 19 23 22
    GTA  3  3  2  2 |     GCA 10  8 10  9 | Glu GAA 14 11 13 14 |     GGA  4  4  5  6
    GTG 10 11 11 11 |     GCG 12 11 12 12 |     GAG  5  6  6  5 |     GGG  6  6  5  5
--------------------------------------------------------------------------------------

Codon position x base (3x4) table for each sequence.

#1: K12            
position  1:    T:0.11922    C:0.20195    A:0.29197    G:0.38686
position  2:    T:0.29440    C:0.23844    A:0.27007    G:0.19708
position  3:    T:0.25061    C:0.30900    A:0.20925    G:0.23114

#2: Shig4337       
position  1:    T:0.13506    C:0.20519    A:0.29351    G:0.36623
position  2:    T:0.29091    C:0.23636    A:0.26234    G:0.21039
position  3:    T:0.25455    C:0.30130    A:0.20519    G:0.23896

#3: CFT073         
position  1:    T:0.11679    C:0.20438    A:0.29440    G:0.38443
position  2:    T:0.29440    C:0.23844    A:0.27251    G:0.19465
position  3:    T:0.24818    C:0.30900    A:0.20438    G:0.23844

#4: O157           
position  1:    T:0.11922    C:0.20195    A:0.29440    G:0.38443
position  2:    T:0.29440    C:0.23844    A:0.27007    G:0.19708
position  3:    T:0.24818    C:0.30900    A:0.20438    G:0.23844

Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT      44 | Ser S TCT      16 | Tyr Y TAT       5 | Cys C TGT       0
      TTC      12 |       TCC      20 |       TAC       0 |       TGC       1
Leu L TTA      42 |       TCA       6 | *** * TAA       0 | *** * TGA       0
      TTG      31 |       TCG      19 |       TAG       0 | Trp W TGG       2
------------------------------------------------------------------------------
Leu L CTT      33 | Pro P CCT      10 | His H CAT       4 | Arg R CGT      12
      CTC      19 |       CCC      14 |       CAC       0 |       CGC      24
      CTA       5 |       CCA      26 | Gln Q CAA      32 |       CGA       5
      CTG      54 |       CCG      24 |       CAG      62 |       CGG       5
------------------------------------------------------------------------------
Ile I ATT      51 | Thr T ACT       9 | Asn N AAT      21 | Ser S AGT      32
      ATC      66 |       ACC      38 |       AAC      57 |       AGC      50
      ATA       1 |       ACA      10 | Lys K AAA      87 | Arg R AGA       1
Met M ATG      19 |       ACG      22 |       AAG       9 |       AGG       2
------------------------------------------------------------------------------
Val V GTT      12 | Ala A GCT      30 | Asp D GAT      65 | Gly G GGT      61
      GTC      33 |       GCC      57 |       GAC      19 |       GGC      87
      GTA      10 |       GCA      37 | Glu E GAA      52 |       GGA      19
      GTG      43 |       GCG      47 |       GAG      22 |       GGG      22
------------------------------------------------------------------------------

(Ambiguity data are not used in the counts.)


Codon position x base (3x4) table, overall

position  1:    T:0.12237    C:0.20334    A:0.29357    G:0.38072
position  2:    T:0.29357    C:0.23795    A:0.26885    G:0.19963
position  3:    T:0.25031    C:0.30717    A:0.20581    G:0.23671

Codon frequencies under model, for use in evolver:
  0.00917211  0.01125565  0.00754151  0.00867387
  0.00743423  0.00912300  0.00611259  0.00703040
  0.00839972  0.01030780  0.00000000  0.00000000
  0.00623703  0.00765384  0.00000000  0.00589823
  0.01524052  0.01870257  0.01253110  0.01441264
  0.01235284  0.01515892  0.01015678  0.01168183
  0.01395711  0.01712761  0.01147585  0.01319895
  0.01036355  0.01271774  0.00852114  0.00980060
  0.02200379  0.02700218  0.01809201  0.02080852
  0.01783465  0.02188598  0.01466405  0.01686586
  0.02015084  0.02472832  0.01656847  0.01905623
  0.01496258  0.01836149  0.01230256  0.01414980
  0.02853544  0.03501757  0.02346248  0.02698537
  0.02312873  0.02838266  0.01901695  0.02187235
  0.02613246  0.03206872  0.02148669  0.02471292
  0.01940410  0.02381195  0.01595448  0.01835005



Nei & Gojobori 1986. dN/dS (dN, dS)
(Pairwise deletion)
(Note: This matrix is not used in later m.l. analysis.
Use runmode = -2 for ML pairwise comparison.)

K12                 
Shig4337             0.5421 (0.0271 0.0500)
CFT073               0.0461 (0.0022 0.0470) 0.3208 (0.0295 0.0920)
O157                 0.0362 (0.0011 0.0299) 0.3702 (0.0283 0.0764) 0.0644 (0.0032 0.0504)


TREE #  1:  ((1, 2), (3, 4));   MP score: -1
This is a rooted tree.  Please check!
check convergence..
lnL(ntime:  6  np: 11):  -1996.434350     +0.000000
   5..6     6..1     6..2     5..7     7..3     7..4  
  0.00533  0.00000  0.12890  0.00460  0.03090  0.01487  2.49989  0.96333  0.00000  0.10384 11.74109
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =   0.18460

((1: 0.000004, 2: 0.128897): 0.005334, (3: 0.030903, 4: 0.014867): 0.004598);

((K12: 0.000004, Shig4337: 0.128897): 0.005334, (CFT073: 0.030903, O157: 0.014867): 0.004598);

Detailed output identifying parameters

kappa (ts/tv) =  2.49989


dN/dS for site classes (K=3)

p:   0.96333  0.00000  0.03667
w:   0.10384  1.00000 11.74109

dN & dS for each branch

 branch           t        S        N    dN/dS       dN       dS   S*dS   N*dN

   5..6       0.005    353.3    879.7   0.5305   0.0014   0.0027    0.9    1.2
   6..1       0.000    353.3    879.7   0.5305   0.0000   0.0000    0.0    0.0
   6..2       0.129    353.3    879.7   0.5305   0.0343   0.0646   22.8   30.2
   5..7       0.005    353.3    879.7   0.5305   0.0012   0.0023    0.8    1.1
   7..3       0.031    353.3    879.7   0.5305   0.0082   0.0155    5.5    7.2
   7..4       0.015    353.3    879.7   0.5305   0.0040   0.0075    2.6    3.5


Positively selected sites (*: P>95%; **: P>99%)

            Pr(w>1)     post mean +- SE for w

   371 I      0.990*        11.625
   372 T      0.890         10.460
   398 V      0.860         10.116
   399 K      0.928         10.902
   400 G      0.548         6.484
   401 S      0.998**       11.722
   405 Q      0.634         7.486
   406 A      0.999**       11.724
   407 G      0.832         9.788
   408 L      0.915         10.750
   410 K      0.524         6.200


Bayes Empirical Bayes (BEB) analysis
Positively selected sites (*: P>95%; **: P>99%)

            Pr(w>1)     post mean +- SE for w

   371 I      0.916         7.889 +- 2.726
   372 T      0.791         6.895 +- 3.584
   398 V      0.756         6.602 +- 3.723
   399 K      0.839         7.284 +- 3.329
   401 S      0.971*        8.306 +- 2.182
   405 Q      0.544         4.877 +- 4.203
   406 A      0.973*        8.320 +- 2.155
   407 G      0.731         6.408 +- 3.845
   408 L      0.818         7.127 +- 3.464



The grid (see ternary graph for p0-p1)

w0:   0.050  0.150  0.250  0.350  0.450  0.550  0.650  0.750  0.850  0.950
w2:   1.500  2.500  3.500  4.500  5.500  6.500  7.500  8.500  9.500 10.500


Posterior on the grid

w0:   0.751  0.231  0.017  0.001  0.000  0.000  0.000  0.000  0.000  0.000
w2:   0.001  0.004  0.013  0.030  0.059  0.096  0.139  0.184  0.223  0.251

Posterior for p0-p1 (see the ternary graph)

 0.000
 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.034
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.015 0.272
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 0.181 0.491

sum of density on p0-p1 =   1.000000
