
seed used = 140000245

K12                                  ATG AGT AAA GTC TTT ATT TGC GCC GCT ATT CCT GAC GAA CTG GCA ACA AGG GAA GAA GGC GCT GTG GCT GTA GCC ACA GCC ATT GAA GCT GGC GAC GAA CGC CGT GCT CGA GCA AAA TTT CAC TGG CAA TTC CTG GAA CAT TAT CCG GCT GCT CAG GAC TGC GCT TAT AAA TTT ATT GTC TGC GAG GAT AAA CCT GGC ATA CCC CGC CCT GCC CTC GAT TCA TGG GAT GCT GAA TAT ATG CAG GAA AAC CGC TGG GAT GAG GAG TCT GCT TCT TTT GTC CCG GTT GAG ACT GAA TCC GAT CCG ATG AAC GTC ACT TTT GAC AAG CTG GCC CCT GAA GTA CAG AAC GCT GTC ATG GTT AAG TTC GAC ACA TGT GAA AAC ATC ACC GTT GAT ATG GTT ATT AGC GCA CAG GAA TTG TTG CAG GAA GAC ATG GCA ACA TTC GAC GGA CAT ATC GTT GAA GCG TTG ATG AAA ATG CCA GAA GTT AAC GCC ATG TAT CCG GAG CTT AAG TTG CAC GCC ATT GGG TGG GTT AAG CAT AAA TGT ATT CCT GGT GCT AAA TGG CCC GAA ATT CAG GCA GAG ATG CGC ATC TGG AAA AAA CGT CGC GAA GGT GAA CGC AAG GAA ACC GGA AAA TAC ACG TCT GTT GTT GAT CTC GCC CGC GCC AGA GCC AAT CAA CAG TAC ACT GAA AAT TCA ACA GGA AAA ATC AGC CCG GTC ATT GCT GCC ATT CAT CGC GAA TAC AAG CAG ACA TGG AAA ACA CTG GAT GAC GAA CTG GCC TAT GGG CGC TGC TTC GCA GAC AGG CAG AAC --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- TTG ATG GTA TGC CTG CGA TCA ATG CCA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- AAC GTG TTT ACC GGA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- TCA TGC GCC AGA ATG CGC TGT TGC TTG AGC GAA AAC --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- CTG CTG TAC CGC CAT CGA AAC GGG --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- CAC ATA CAG GCA GAG TGG CCG 
O157                                 ATG AGT AAA GTC TTT ATT TGC GCC GCC ATT CCG GAC GAA CAG GCA ATA AAG GAA GAA GGT GCC GTC GCT GTA GCC ACT GCC ATT GAA GCC GGT GAT GAA CGT CGC GCC CGC GCA AAA TTT CAC TGG CAA TTC CTG GAA CAT TAT CCG GCT GCT CAG GAC TGC GCT TAT AAA TTT CTT GTT TGC GAG GAT AAA CCC GGT ATA CCC CGC CCT GCC CTC GAT TCC TGG GAT GCT GAA TAT ATG CAG GAA AAC CGC TGG GAT GAG GCG TCT GCT TCC TTT GTC CCG GTC GAG ACT GAA TCC GAT CCG ATG AAC GTC ACT TTT GAC AAC CTG GCC CCT GAA GTA CAG AAC GCT GTC ATG GTT AAG TTC GAC ACA TGT GAA AAC ATC ACT GTT GAT ATG GTG ATT AGC GCA CAG GAA TTG TTG CAG GAA GAC ATG GCA ACA TTC GAC GGC CAT ATC GTT GAA GCG TTG ATG AAA ATG CCA GAA GTT AAC GCT ATG TAT CCG GAG CTT AAG CTG CAT GCC ATC GGG TGG GTT AAG CAT AAA TGT AAG CCT GGT GCC AAA TGG CCC GAA ATT CAG GCA GAG ATG CGC ATC TGG AAA AAA CGT CGC GAA GGT GAA CGC AAG GAA GCC GGA AAA TAC ACG TCT GTT GTT GAT CTC GCC CGC GCC AGA GCC AAT CAA CAG CAC ACT GAA AAT TCA ACA GGA AAA ATC AAC CCG GTC ATT GCT GCC ATT CAT CGC GAA TAC AAG CAG ACA TGG AAA ACA CTG GAT GAC GAA CTG GCC TAC GCT CTC TGG CCT GGT GAT GTG GAT GCC GGA AAC ATT GAC GGC AGC ATC CAT CGC TGG GCA AAA AAT GAA GTT ATC GAC AAC GGC CGC GAA GAC TGG AAG CGT ATC TCG GCA TCA ATG CGC AAA CAG CCT GAT GCC CTT CGC TAC GAC CGC CAG ACT ATT TTT GGC CTT GTC CGT GAA CGT CCG ATC GAC ATT CAC AAA GAC CCT GTG GCA CTG AAC AAA TAC ATT ACT GAA TAC CTG ACT ACA AAG GGC GTG TTT GAA GAT GAA GGA ACA AAT CAG AGC GCA ACT GAT ACT CTC TCG TCG CCA GTA CCA GAA ACT GAT GCA GTG GAA ACG GCA ATT CCA GAC AAC GAA AAA ACC GAA TGC AAA GTG GAA GTC GAA CCA TCT GTA GAA CGT GAG GGG CCG TTC TAC TTC CTC TTC ACC GAC AAG GAT GGC GAA AAA TAC GGT CGC GCA AAC AAA CTT TCT GGT CTG GAT AAG GCG CTG GCT GCC GGG GCT ACT GAA ATC ACA AAA GAA GAA TAT TTT GCC CGA AAA AAT GGC ACA TAC ACA GGC TTA CCG CAA AAT GCA AAT ACC GCA CAA AAT TCT GAA CAA CCA 
EDL933                               ATG AGT AAA GTC TTT ATT TGC GCC GCC ATT CCG GAC GAA CAG GCA ATA AAG GAA GAA GGT GCC GTC GCT GTA GCC ACT GCC ATT GAA GCC GGT GAT GAA CGT CGC GCC CGC GCA AAA TTT CAC TGG CAA TTC CTG GAA CAT TAT CCG GCT GCT CAG GAC TGC GCT TAT AAA TTT CTT GTT TGC GAG GAT AAA CCC GGT ATA CCC CGC CCT GCC CTC GAT TCC TGG GAT GCT GAA TAT ATG CAG GAA AAC CGC TGG GAT GAG GCG TCT GCT TCC TTT GTC CCG GTC GAG ACT GAA TCC GAT CCG ATG AAC GTC ACT TTT GAC AAC CTG GCC CCT GAA GTA CAG AAC GCT GTC ATG GTT AAG TTC GAC ACA TGT GAA AAC ATC ACT GTT GAT ATG GTG ATT AGC GCA CAG GAA TTG TTG CAG GAA GAC ATG GCA ACA TTC GAC GGC CAT ATC GTT GAA GCG TTG ATG AAA ATG CCA GAA GTT AAC GCT ATG TAT CCG GAG CTT AAG CTG CAT GCC ATC GGG TGG GTT AAG CAT AAA TGT AAG CCT GGT GCC AAA TGG CCC GAA ATT CAG GCA GAG ATG CGC ATC TGG AAA AAA CGT CGC GAA GGT GAA CGC AAG GAA GCC GGA AAA TAC ACG TCT GTT GTT GAT CTC GCC CGC GCC AGA GCC AAT CAA CAG CAC ACT GAA AAT TCA ACA GGA AAA ATC AAC CCG GTC ATT GCT GCC ATT CAT CGC GAA TAC AAG CAG ACA TGG AAA ACA CTG GAT GAC GAA CTG GCC TAC GCT CTC TGG CCT GGT GAT GTG GAT GCC GGA AAC ATT GAC GGC AGC ATC CAT CGC TGG GCA AAA AAT GAA GTT ATC GAC AAC GGC CGC GAA GAC TGG AAG CGT ATC TCG GCA TCA ATG CGC AAA CAG CCT GAT GCC CTT CGC TAC GAC CGC CAG ACT ATT TTT GGC CTT GTC CGT GAA CGT CCG ATC GAC ATT CAC AAA GAC CCT GTG GCA CTG AAC AAA TAC ATT ACT GAA TAC CTG ACT ACA AAG GGC GTG TTT GAA GAT GAA GGA ACA AAT CAG AGC GCA ACT GAT ACT CTC TCG TCG CCA GTA CCA GAA ACT GAT GCA GTG GAA ACG GCA ATT CCA GAC AAC GAA AAA ACC GAA TGC AAA GTG GAA GTC GAA CCA TCT GTA GAA CGT GAG GGG CCG TTC TAC TTC CTC TTC ACC GAC AAG GAT GGC GAA AAA TAC GGT CGC GCA AAC AAA CTT TCT GGT CTG GAT AAG GCG CTG GCT GCC GGG GCT ACT GAA ATC ACA AAA GAA GAA TAT TTT GCC CGA AAA AAT GGC ACA TAC ACA GGC TTA CCG CAA AAT GCA AAT ACC GCA CAA AAT TCT GAA CAA CCA 


CODONML (in paml 3.14, January 2004)    H:\users\mt269\runpaml\NEWdna80\b1577.phy   Model: One dN/dS ratio 
Codon frequencies: F3x4
Site-class models:  PositiveSelection

ns = 3  	ls = 451
# site patterns = 178
   10    1   12    5    6    7    3   11    5    1    7   22    1    5    1
    1    3    1    8    2    1    2    1    1    2    1    7    2    3    4
    4    4    5    8    1    1    5    8    1    1    2    7    3    2    1
    6    1    2    1    1    3    1    1    7    5    5    2    4    1    1
    1    3    1    1    1    1    1    1    1    1    1    1    2    1    1
    2    2    1    1    2    1    1    1    1    1    1    1    1    1    1
    1    1    2    4    4    6    5    2    4    1    5    2    5    9    5
   14    1    3    4    1    1    1    1    1    1    1    1    3    3    3
    6    2    6    2    2    3    1    1    2    4    5    1    1    1    1
    1    2    3    2    1    1    1    1    1    1    1    1    1    1    1
    2    1    2    1    2    1    1    1    1    1    1    1    1    1    2
    1    2    1    1    1    1    1    1    1    1    1    1    1

K12                                  ATG AGT AAA GTC TTT ATT TGC GCC GCT CCT GAC GAA CTG GCA ACA AGG GGC GTG GCT GTA ACA GAC CGC CGT CGA CAC TGG CAA TTC CTG CAT TAT CCG CAG ATT GTC GAG GAT CCT ATA CCC CGC CCT CTC TCA AAC GAG TCT TCT GTT ACT TCC AAG GTT AAG ACA TGT ATC ACC GTT AGC TTG GGA GCG CCA GCC CTT TTG CAC ATT GGG ATT GGT CGT ACC GGA TAC ACG AGA AAT TAC TCA AGC TAT GGG CGC TGC TTC GCA AGG CAG AAC --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- TTG ATG GTA TGC CTG TCA ATG CCA --- --- --- --- --- --- --- --- --- --- --- --- --- --- AAC GTG ACC GGA --- --- --- --- TCA TGC GCC AGA ATG CGC TGT TGC TTG AGC GAA --- --- --- --- --- --- CTG CTG TAC CGC CAT CGA AAC GGG --- --- --- --- --- --- --- CAC ATA CAG GCA GAG TGG CCG 
O157                                 ... ... ... ... ... ... ... ... ..C ..G ... ... .A. ... .T. .A. ..T ..C ... ... ..T ..T ..T ..C ..C ... ... ... ... ... ... ... ... ... C.. ..T ... ... ..C ... ... ... ... ... ..C ... .C. ... ..C ..C ... ... ..C ... ... ... ... ... ..T ..G ... ... ..C ... ... ..T ... C.. ..T ..C ... .AG ... ... G.. ... ... ... ... ... C.. ... .A. ..C .CT .T. ..G CCT .GT GT. G.T GC. GGA AAC ATT GAC GGC AGC ATC CAT CGC TGG GCA AAA AAT GAA GTT AAG CGT A.C TC. .C. .CA A.. AA. CA. ..T GAT GCC CTT TAC CAG ACT TTT GTC CCG CAC CCT GTG CTG ACA GG. ... GAA .AT CTC TCG CCA GTA GA. ACT .AT GC. G.. GAA ACG GCA A.T CCA ..C ACC TGC TCT GAG GGG TTC T.C ..C .T. AC. G.C AAG G.T ..C GGT GCG GCT TAT CGA TTA CAA GCA CA. A.T T.T ..A CAA ..A 
EDL933                               ... ... ... ... ... ... ... ... ..C ..G ... ... .A. ... .T. .A. ..T ..C ... ... ..T ..T ..T ..C ..C ... ... ... ... ... ... ... ... ... C.. ..T ... ... ..C ... ... ... ... ... ..C ... .C. ... ..C ..C ... ... ..C ... ... ... ... ... ..T ..G ... ... ..C ... ... ..T ... C.. ..T ..C ... .AG ... ... G.. ... ... ... ... ... C.. ... .A. ..C .CT .T. ..G CCT .GT GT. G.T GC. GGA AAC ATT GAC GGC AGC ATC CAT CGC TGG GCA AAA AAT GAA GTT AAG CGT A.C TC. .C. .CA A.. AA. CA. ..T GAT GCC CTT TAC CAG ACT TTT GTC CCG CAC CCT GTG CTG ACA GG. ... GAA .AT CTC TCG CCA GTA GA. ACT .AT GC. G.. GAA ACG GCA A.T CCA ..C ACC TGC TCT GAG GGG TTC T.C ..C .T. AC. G.C AAG G.T ..C GGT GCG GCT TAT CGA TTA CAA GCA CA. A.T T.T ..A CAA ..A 



Codon usage in sequences
--------------------------------------------------------------------------
Phe TTT  6  8  8 | Ser TCT  3  5  5 | Tyr TAT  5  5  5 | Cys TGT  3  2  2
    TTC  4  6  6 |     TCC  1  3  3 |     TAC  4  9  9 |     TGC  7  4  4
Leu TTA  0  1  1 |     TCA  4  2  2 | *** TAA  0  0  0 | *** TGA  0  0  0
    TTG  6  3  3 |     TCG  0  3  3 |     TAG  0  0  0 | Trp TGG  8 10 10
--------------------------------------------------------------------------
Leu CTT  1  5  5 | Pro CCT  5  6  6 | His CAT  5  6  6 | Arg CGT  2  6  6
    CTC  2  5  5 |     CCC  2  3  3 |     CAC  3  3  3 |     CGC 11 15 15
    CTA  0  0  0 |     CCA  2  6  6 | Gln CAA  2  5  5 |     CGA  3  1  1
    CTG  8  9  9 |     CCG  6  9  9 |     CAG 10 12 12 |     CGG  0  0  0
--------------------------------------------------------------------------
Ile ATT 10 12 12 | Thr ACT  3 12 12 | Asn AAT  2  8  8 | Ser AGT  1  1  1
    ATC  4 10 10 |     ACC  3  3  3 |     AAC  9 12 12 |     AGC  3  3  3
    ATA  2  2  2 |     ACA  7 10 10 | Lys AAA 12 22 22 | Arg AGA  2  1  1
Met ATG 13 11 11 |     ACG  1  2  2 |     AAG  6 11 11 |     AGG  2  0  0
--------------------------------------------------------------------------
Val GTT  9  9  9 | Ala GCT 13 12 12 | Asp GAT  8 17 17 | Gly GGT  2  8  8
    GTC  6  9  9 |     GCC 13 21 21 |     GAC  9 15 15 |     GGC  3  8  8
    GTA  3  4  4 |     GCA  7 14 14 | Glu GAA 23 40 40 |     GGA  4  4  4
    GTG  2  6  6 |     GCG  1  3  3 |     GAG  7  6  6 |     GGG  3  3  3
--------------------------------------------------------------------------

Codon position x base (3x4) table for each sequence.

#1: K12            
position  1:    T:0.16667    C:0.20261    A:0.26144    G:0.36928
position  2:    T:0.24837    C:0.23203    A:0.34314    G:0.17647
position  3:    T:0.25490    C:0.27451    A:0.23203    G:0.23856

#2: O157           
position  1:    T:0.13525    C:0.20177    A:0.26608    G:0.39690
position  2:    T:0.22173    C:0.25277    A:0.37916    G:0.14634
position  3:    T:0.27051    C:0.28603    A:0.24834    G:0.19512

#3: EDL933         
position  1:    T:0.13525    C:0.20177    A:0.26608    G:0.39690
position  2:    T:0.22173    C:0.25277    A:0.37916    G:0.14634
position  3:    T:0.27051    C:0.28603    A:0.24834    G:0.19512

Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT      22 | Ser S TCT      13 | Tyr Y TAT      15 | Cys C TGT       7
      TTC      16 |       TCC       7 |       TAC      22 |       TGC      15
Leu L TTA       2 |       TCA       8 | *** * TAA       0 | *** * TGA       0
      TTG      12 |       TCG       6 |       TAG       0 | Trp W TGG      28
------------------------------------------------------------------------------
Leu L CTT      11 | Pro P CCT      17 | His H CAT      17 | Arg R CGT      14
      CTC      12 |       CCC       8 |       CAC       9 |       CGC      41
      CTA       0 |       CCA      14 | Gln Q CAA      12 |       CGA       5
      CTG      26 |       CCG      24 |       CAG      34 |       CGG       0
------------------------------------------------------------------------------
Ile I ATT      34 | Thr T ACT      27 | Asn N AAT      18 | Ser S AGT       3
      ATC      24 |       ACC       9 |       AAC      33 |       AGC       9
      ATA       6 |       ACA      27 | Lys K AAA      56 | Arg R AGA       4
Met M ATG      35 |       ACG       5 |       AAG      28 |       AGG       2
------------------------------------------------------------------------------
Val V GTT      27 | Ala A GCT      37 | Asp D GAT      42 | Gly G GGT      18
      GTC      24 |       GCC      55 |       GAC      39 |       GGC      19
      GTA      11 |       GCA      35 | Glu E GAA     103 |       GGA      12
      GTG      14 |       GCG       7 |       GAG      19 |       GGG       9
------------------------------------------------------------------------------

(Ambiguity data are not used in the counts.)


Codon position x base (3x4) table, overall

position  1:    T:0.14321    C:0.20199    A:0.26490    G:0.38990
position  2:    T:0.22848    C:0.24752    A:0.37003    G:0.15397
position  3:    T:0.26656    C:0.28311    A:0.24421    G:0.20613

Codon frequencies under model, for use in evolver:
  0.00898468  0.00954273  0.00823131  0.00694778
  0.00973340  0.01033796  0.00891725  0.00752676
  0.01455127  0.01545508  0.00000000  0.00000000
  0.00605489  0.00643097  0.00000000  0.00468220
  0.01267203  0.01345912  0.01160947  0.00979918
  0.01372804  0.01458071  0.01257693  0.01061578
  0.02052318  0.02179792  0.01880230  0.01587041
  0.00853985  0.00907027  0.00782377  0.00660380
  0.01661906  0.01765130  0.01522554  0.01285139
  0.01800398  0.01912224  0.01649433  0.01392233
  0.02691565  0.02858743  0.02465875  0.02081366
  0.01119980  0.01189544  0.01026069  0.00866072
  0.02446118  0.02598051  0.02241009  0.01891563
  0.02649961  0.02814555  0.02427759  0.02049194
  0.03961648  0.04207713  0.03629460  0.03063510
  0.01648471  0.01750860  0.01510245  0.01274749



Nei & Gojobori 1986. dN/dS (dN, dS)
(Pairwise deletion)
(Note: This matrix is not used in later m.l. analysis.
Use runmode = -2 for ML pairwise comparison.)

K12                 
O157                 0.3727 (0.1165 0.3125)
EDL933               0.3727 (0.1165 0.3125)-1.0000 (0.0000 0.0000)


TREE #  1:  (1, (2, 3));   MP score: -1
This is a rooted tree.  Please check!
lnL(ntime:  4  np:  9):  -2269.153974     +0.000000
   4..1     4..5     5..2     5..3  
  0.07653  2.06466  0.00000  0.00000  1.79615  0.74844  0.12527  0.00000 32.75394
Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =   2.14120

(1: 0.076529, (2: 0.000004, 3: 0.000004): 2.064663);

(K12: 0.076529, (O157: 0.000004, EDL933: 0.000004): 2.064663);

Detailed output identifying parameters

kappa (ts/tv) =  1.79615


dN/dS for site classes (K=3)

p:   0.74844  0.12527  0.12629
w:   0.00000  1.00000 32.75394

dN & dS for each branch

 branch           t        S        N    dN/dS       dN       dS   S*dS   N*dN

   4..1       0.077    357.1    995.9   4.2617   0.0320   0.0075    2.7   31.8
   4..5       2.065    357.1    995.9   4.2617   0.8624   0.2024   72.3  858.9
   5..2       0.000    357.1    995.9   4.2617   0.0000   0.0000    0.0    0.0
   5..3       0.000    357.1    995.9   4.2617   0.0000   0.0000    0.0    0.0


Positively selected sites (*: P>95%; **: P>99%)

            Pr(w>1)     post mean +- SE for w

   180 I      0.893         29.370
   257 G      0.885         29.091
   260 F      0.976*        31.991
   261 A      0.873         28.711
   263 R      0.902         29.637
   264 Q      0.868         28.556
   265 N      0.831         27.373
   291 L      0.924         30.339
   292 M      0.923         30.316
   294 C      0.954*        31.303
   297 S      0.959*        31.436
   298 M      0.923         30.319
   339 N      0.756         25.003
   342 T      0.977*        32.019
   343 G      0.795         26.234
   360 S      0.947         31.080
   361 C      0.992**       32.498
   362 A      0.736         24.387
   363 R      0.885         29.107
   365 R      0.986*        32.301
   366 C      0.997**       32.667
   367 C      0.995**       32.599
   368 L      0.925         30.382
   369 S      0.996**       32.612
   392 L      0.876         28.820
   395 R      0.943         30.946
   396 H      0.757         25.045
   397 R      0.984*        32.260
   398 N      0.645         21.493
   445 H      0.987*        32.328
   446 I      0.916         30.075
   447 Q      0.882         29.006
   448 A      0.884         29.081
   450 W      0.995**       32.610


Bayes Empirical Bayes (BEB) analysis
Positively selected sites (*: P>95%; **: P>99%)

            Pr(w>1)     post mean +- SE for w

    14 L      0.706         7.125 +- 4.339
    16 T      0.562         5.750 +- 4.716
    17 R      0.503         5.193 +- 4.745
    59 I      0.662         6.707 +- 4.503
    88 E      0.630         6.401 +- 4.599
   180 I      0.951*        9.454 +- 2.106
   206 T      0.550         5.639 +- 4.735
   257 G      0.866         8.639 +- 3.297
   258 R      0.684         6.916 +- 4.423
   259 C      0.675         6.823 +- 4.453
   260 F      0.978*        9.701 +- 1.547
   261 A      0.853         8.512 +- 3.425
   263 R      0.974*        9.656 +- 1.661
   264 Q      0.944         9.393 +- 2.216
   265 N      0.946         9.405 +- 2.193
   291 L      0.965*        9.578 +- 1.850
   292 M      0.978*        9.698 +- 1.554
   293 V      0.583         5.956 +- 4.690
   294 C      0.890         8.869 +- 3.046
   295 L      0.648         6.576 +- 4.544
   297 S      0.984*        9.752 +- 1.397
   298 M      0.972*        9.639 +- 1.706
   339 N      0.922         9.195 +- 2.535
   342 T      0.988*        9.789 +- 1.274
   343 G      0.877         8.758 +- 3.132
   360 S      0.980*        9.717 +- 1.500
   361 C      0.990**       9.808 +- 1.212
   362 A      0.711         7.164 +- 4.344
   363 R      0.970*        9.624 +- 1.741
   364 M      0.527         5.421 +- 4.745
   365 R      0.992**       9.825 +- 1.144
   366 C      0.997**       9.865 +- 0.981
   367 C      0.994**       9.843 +- 1.078
   368 L      0.966*        9.588 +- 1.828
   369 S      0.996**       9.854 +- 1.030
   392 L      0.825         8.254 +- 3.656
   394 Y      0.616         6.263 +- 4.629
   395 R      0.982*        9.730 +- 1.462
   396 H      0.748         7.521 +- 4.165
   397 R      0.983*        9.737 +- 1.455
   398 N      0.643         6.513 +- 4.591
   445 H      0.992**       9.820 +- 1.166
   446 I      0.971*        9.634 +- 1.717
   447 Q      0.952*        9.461 +- 2.088
   448 A      0.806         8.074 +- 3.804
   450 W      0.994**       9.840 +- 1.089



The grid (see ternary graph for p0-p1)

w0:   0.050  0.150  0.250  0.350  0.450  0.550  0.650  0.750  0.850  0.950
w2:   1.500  2.500  3.500  4.500  5.500  6.500  7.500  8.500  9.500 10.500


Posterior on the grid

w0:   0.966  0.034  0.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000
w2:   0.000  0.000  0.000  0.000  0.001  0.006  0.031  0.106  0.276  0.580

Posterior for p0-p1 (see the ternary graph)

 0.000
 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.001 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 0.075 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.007 0.283 0.628 0.000 0.000

sum of density on p0-p1 =   1.000000
