LINE name	location (in danRer2)	target-site alteration	5' junction	sequence of extra 5' nucleotides	3' junction	sequence of extra 3' sequences	LINE structure	LINE length (bp)	host transposon	divergence (%)
CR1-2_DR (ZfL2-2)	chr12:7582824-7585007	2 bp TSD	1 bp MH		2 bp MH		5' truncated	1223	HATN13_DR	9.8
CR1-2_DR (ZfL2-2)	chr23:3169381-3170485	3 bp TSD	6 bp MH		5 bp MH		5' truncated	613	TDR22 (-)	9.8
CR1-2_DR (ZfL2-2)	chr2:43871283-43872525	3 bp TSD	3 bp MH		3 bp MH		5' truncated	393	HARBINGERN5_DR	8.7
CR1-2_DR (ZfL2-2)	chr6:29669607-29670142	3 bp TSD	2 bp MH		3 bp MH		5' truncated	371	DNA15TA1_DR	3.6
CR1-2_DR (ZfL2-2)	chr8:3969901-3970772	3 bp TSD	1 bp MH		2 bp MH		5' truncated	777	TDR2	3.3
CR1-2_DR (ZfL2-2)	chr23:41083897-41085012	3 bp TSD	2 bp MH		1 bp MH		5' truncated	715	TDR2	6.7
CR1-2_DR (ZfL2-2)	chr11:2843107-2844464	4 bp TSD	1 bp MH		7 bp MH		5' truncated	1148	LOOPERN3_DR	8.9
CR1-2_DR (ZfL2-2)	chr16:3045916-3047456	4 bp TSD	13 bp MH		4 bp MH		5' truncated	518	TC1DR3 (-)	8.7
CR1-2_DR (ZfL2-2)	chr16:14920875-14921227	4 bp TSD	1 bp MH		4 bp MH		5' truncated	271	LOOPERN4_DR	9.1
CR1-2_DR (ZfL2-2)	chr18:9205341-9206882	4 bp TSD	2 bp MH		2 bp MH		5' truncated	1143	DNA15TA1_DR	7.9
CR1-2_DR (ZfL2-2)	chr2:7860131-7861538	4 bp TSD	1 bp MH		1 bp MH		5' truncated	1088	DNA13TA1a_DR	5.6
CR1-2_DR (ZfL2-2)	chr6:32473542-32474731	5 bp TSD	3 bp MH		4 bp MH		5' truncated	797	DNA15TA1_DR	8.1
CR1-2_DR (ZfL2-2)	chr13:27993328-27993754	5 bp TSD	3 bp MH		4 bp MH		5' truncated	254	TDR18	8.1
CR1-2_DR (ZfL2-2)	chr19:28916990-28917560	5 bp TSD	2 bp MH		4 bp MH		5' truncated	281	HARBINGERN5_DR	9.2
CR1-2_DR (ZfL2-2)	chr3:23969215-23970834	5 bp TSD	1 bp MH		4 bp MH		5' truncated	893	EXPANDER1_DR	10
CR1-2_DR (ZfL2-2)	chr18:8480534-8481438	5 bp TSD	1 bp MH		4 bp MH		5' truncated	617	TDR16 (-)	6.5
CR1-2_DR (ZfL2-2)	chr1:2982247-2982977	5 bp TSD	3 bp MH		3 bp MH		5' truncated	334	DNA15TA1_DR (-)	8.6
CR1-2_DR (ZfL2-2)	chr11:1577896-1579143	5 bp TSD	3 bp MH		3 bp MH		5' truncated	996	TDR16	9.5
CR1-2_DR (ZfL2-2)	chr10:27131495-27133146	5 bp TSD	2 bp MH		3 bp MH		5' truncated	872	CR1-3_DR	9.3
CR1-2_DR (ZfL2-2)	chr16:15444088-15445387	5 bp TSD	2 bp MH		3 bp MH		5' truncated	659	TDR2 (-)	8.1
CR1-2_DR (ZfL2-2)	chr22:7202527-7203069	5 bp TSD	1 bp MH		2 bp MH		5' truncated	258	DNA25TWA1_DR (-)	4.8
CR1-2_DR (ZfL2-2)	chr13:12096554-12098048	5 bp TSD	1 bp MH		2 bp MH		5' truncated	332	TC1DR3	9.3
CR1-2_DR (ZfL2-2)	chr17:37647575-37648782	5 bp TSD	5 bp MH		1 bp MH		5' truncated	742	TDR18 (-)	8.9
CR1-2_DR (ZfL2-2)	chr20:17443088-17444126	6 bp TSD	2 bp MH		5 bp MH		5' truncated	694	TDR2	5.4
CR1-2_DR (ZfL2-2)	chr10:731334-732759	6 bp TSD	7 bp MH		4 bp MH		5' truncated	725	TDR8	9.2
CR1-2_DR (ZfL2-2)	chr18:18378233-18379410	6 bp TSD	1 bp MH		4 bp MH		5' truncated	905	TC1DR3 (-)	7.6
CR1-2_DR (ZfL2-2)	chr5:63931845-63933423	6 bp TSD	1 bp MH		3 bp MH		5' truncated	541	TC1DR3 (-)	9.8
CR1-2_DR (ZfL2-2)	chr13:17873701-17875307	6 bp TSD	2 bp MH		2 bp MH		5' truncated	369	TDR1	6.7
CR1-2_DR (ZfL2-2)	chr15:33935172-33935867	6 bp TSD	1 bp MH		1 bp MH		5' truncated	406	HARBINGERN3_DR	7.4
CR1-2_DR (ZfL2-2)	chr5:55172438-55172721	7 bp TSD	7 bp MH		4 bp MH		5' truncated	166	TDR18 (-)	6.6
CR1-2_DR (ZfL2-2)	chr2:28635366-28637051	8 bp TSD	4 bp MH		5 bp MH		5' truncated	647	TDR22	9.6
CR1-2_DR (ZfL2-2)	chr19:3270363-3271409	8 bp TSD	5 bp MH		4 bp MH		5' truncated	310	TDR2	7.5
CR1-2_DR (ZfL2-2)	chr16:6397188-6397375	8 bp TSD	3 bp MH		3 bp MH		5' truncated	60	TDR18 (-)	4.6
CR1-2_DR (ZfL2-2)	chr3:4043397-4044510	8 bp TSD	4 bp MH		2 bp MH		5' truncated	243	CR1-3_DR (-)	4
CR1-2_DR (ZfL2-2)	chr11:11231964-11233445	14 bp TSD	8 bp MH		2 bp MH		5' truncated	695	TDR2	7.7
CR1-2_DR (ZfL2-2)	chr22:373353-376389	3 bp TSD	3 bp MH		direct		5' truncated	640	DIRS1_DR	5.4
CR1-2_DR (ZfL2-2)	chr1:11703735-11704981	6 bp TSD	2 bp MH		direct		5' truncated	980	DNA15TA1_DR	8.6
CR1-2_DR (ZfL2-2)	chr12:16258733-16260432	1 bp TSD	2 bp MH		10 bp extra nucleotides	AATAGATCAG	5' truncated	973	HARBINGERN5_DR	7
CR1-2_DR (ZfL2-2)	chr23:23709555-23710779	2 bp TSD	1 bp MH		4 bp extra nucleotides	TAAT	5' truncated	1092	CR1-1_DR	7
CR1-2_DR (ZfL2-2)	chr5:45442560-45443671	3 bp TSD	4 bp MH		8 bp extra nucleotides	TCAGATTT	5' truncated	799	HATN1_DR (-)	7.1
CR1-2_DR (ZfL2-2)	chr14:15404707-15405491	6 bp TSD	3 bp MH		1 bp extra nucleotides	T	5' truncated	333	TDR5	9
CR1-2_DR (ZfL2-2)	chr16:4478869-4479885	6 bp TSD	2 bp MH		4 bp extra nucleotides	AATT	5' truncated	652	HARBINGERN4_DR	10
CR1-2_DR (ZfL2-2)	chr14:58357709-58358224	2 bp TSD	direct		1 bp MH		5' truncated	135	DNA15TA1_DR	8
CR1-2_DR (ZfL2-2)	chr19:44527983-44529284	4 bp TSD	direct		3 bp MH		5' truncated	768	TDR2 (-)	5.9
CR1-2_DR (ZfL2-2)	chr12:21779150-21780698	4 bp TSD	direct		2 bp MH		5' truncated	1075	HATN13_DR	9.4
CR1-2_DR (ZfL2-2)	chr19:19682389-19682664	5 bp TSD	direct		4 bp MH		5' truncated	59	TDR18	8.9
CR1-2_DR (ZfL2-2)	chr2:50044987-50045862	8 bp TSD	direct		11 bp MH		5' truncated	557	HARBINGERN5_DR (-)	8.1
CR1-2_DR (ZfL2-2)	chr14:44682485-44683672	8 bp TSD	direct		6 bp MH		5' truncated	954	TDR18 (-)	7.2
CR1-2_DR (ZfL2-2)	chr6:9618819-9619874	11 bp TSD	direct		4 bp MH		5' truncated	758	HE1_DR1	9.5
CR1-2_DR (ZfL2-2)	chr20:47404243-47405129	5 bp TSD	direct		3 bp extra nucleotides	AAA	5' truncated	721	TC1DR3 (-)	8
CR1-2_DR (ZfL2-2)	chr24:10683212-10684112	1 bp TSD	1 bp extra nucleotides	T	11 bp MH		5' truncated	502	HATN1_DR	10
CR1-2_DR (ZfL2-2)	chr14:37616259-37618945	2 bp TSD	1 bp extra nucleotides	T	2 bp MH		5' truncated	1561	LOOPERN1_DR (-)	5.9
CR1-2_DR (ZfL2-2)	chr17:18617634-18618221	3 bp TSD	3 bp extra nucleotides	TCA	3 bp MH		5' truncated	455	DNA13TA1_DR (-)	9.4
CR1-2_DR (ZfL2-2)	chr10:12021476-12022114	3 bp TSD	7 bp extra nucleotides	TCTTCTC	3 bp MH		5' truncated	102	TDR18 (-)	5.4
CR1-2_DR (ZfL2-2)	chr12:25284-25930	3 bp TSD	11 bp extra nucleotides	AAAAGAGCACA	3 bp MH		5' truncated	79	TDR18 (-)	8.1
CR1-2_DR (ZfL2-2)	chr10:4380368-4381055	3 bp TSD	6 bp extra nucleotides	ATAAAC	1 bp MH		5' truncated	243	HATN1_DR (-)	9.5
CR1-2_DR (ZfL2-2)	chr21:8673818-8674169	3 bp TSD	13 bp extra nucleotides	ACTCATCATATGT	1 bp MH		5' truncated	115	HE1_DR1 (-)	9.6
CR1-2_DR (ZfL2-2)	chr10:27074856-27075998	3 bp TSD	68 bp extra nucleotides	TGTTAACAGTGTATGAATAGTAGCTGTCCTTTTTATTTTGTATATAGTGTATATATTTGATAGAGTTA	1 bp MH		5' truncated	562	TDR18	9.9
CR1-2_DR (ZfL2-2)	chr19:48907823-48908373	4 bp TSD	5 bp extra nucleotides	CCTCA	4 bp MH		5' truncated	77	TDR18	6.7
CR1-2_DR (ZfL2-2)	chr14:4509313-4509807	4 bp TSD	7 bp extra nucleotides	GTTTCTT	4 bp MH		5' truncated	389	DNA11TA1_DR	8.4
CR1-2_DR (ZfL2-2)	chr17:33861733-33862686	4 bp TSD	2 bp extra nucleotides	GT	2 bp MH		5' truncated	169	TC1DR2 (-)	7.6
CR1-2_DR (ZfL2-2)	chr4:20265517-20266272	4 bp TSD	6 bp extra nucleotides	AGCTGC	2 bp MH		5' truncated	448	LOOPERN3_DR	9.4
CR1-2_DR (ZfL2-2)	chr18:14142199-14143336	4 bp TSD	11 bp extra nucleotides	ATATATACTAT	2 bp MH		5' truncated	753	HARBINGERN6_DR (-)	10
CR1-2_DR (ZfL2-2)	chr13:12692815-12693825	4 bp TSD	3 bp extra nucleotides	TGA	1 bp MH		5' truncated	941	HATN3_DR	4.4
CR1-2_DR (ZfL2-2)	chr3:17414699-17415470	4 bp TSD	5 bp extra nucleotides	TGACT	1 bp MH		5' truncated	200	TDR18	6
CR1-2_DR (ZfL2-2)	chr1:48090057-48090347	5 bp TSD	15 bp extra nucleotides	GTCGCTTTGGATAAA	5 bp MH		5' truncated	51	TDR18 (-)	7.9
CR1-2_DR (ZfL2-2)	chr23:20879684-20881343	5 bp TSD	14 bp extra nucleotides	ACTGGCAGCAACTG	4 bp MH		5' truncated	459	TC1DR3	7.9
CR1-2_DR (ZfL2-2)	chr18:24602950-24607701	5 bp TSD	24 bp extra nucleotides	AGCACTTTAGCACTTTAGCACTTT	4 bp MH		Full-length	4229	TC1DR3 (-)	8.2
CR1-2_DR (ZfL2-2)	chr20:6697668-6697996	5 bp TSD	2 bp extra nucleotides	TA	3 bp MH		5' truncated	88	TDR20	4.7
CR1-2_DR (ZfL2-2)	chr23:7694188-7694505	5 bp TSD	3 bp extra nucleotides	CCC	3 bp MH		5' truncated	228	TDR18 (-)	1.2
CR1-2_DR (ZfL2-2)	chr11:6563594-6564328	5 bp TSD	11 bp extra nucleotides	AATGAATTGAG	3 bp MH		5' truncated	578	CR1-1_DR (-)	10
CR1-2_DR (ZfL2-2)	chr23:19340646-19341229	5 bp TSD	31 bp extra nucleotides	TAATAATAATAATAATTTAAAAAATAATAAT	3 bp MH		5' truncated	157	TDR18	7.2
CR1-2_DR (ZfL2-2)	chr21:39022560-39023799	5 bp TSD	2 bp extra nucleotides	AA	2 bp MH		5' truncated	874	DNA15TA1_DR (-)	8.5
CR1-2_DR (ZfL2-2)	chr7:58213519-58214350	5 bp TSD	32 bp extra nucleotides	CCAGAAAGTACCAGAAGTACCAGAAACCAGTA	2 bp MH		5' truncated	422	DNA15TA1_DR (-)	5.9
CR1-2_DR (ZfL2-2)	chr9:3677437-3678475	5 bp TSD	54 bp extra nucleotides	CTCTAGATAATATTCTCTATTCTCTTAACATTCTCTCAATATTTGACTAGATAA	2 bp MH		5' truncated	449	TDR18	6.8
CR1-2_DR (ZfL2-2)	chr9:1922025-1924003	5 bp TSD	8 bp extra nucleotides	GACATTTT	1 bp MH		5' truncated	900	TDR1 (-)	7.7
CR1-2_DR (ZfL2-2)	chr7:38261744-38263847	5 bp TSD	25 bp extra nucleotides	TTTTTCTAAATCTAGCTCTATCAAG	1 bp MH		5' truncated	642	CR1-3_DR (-)	5.9
CR1-2_DR (ZfL2-2)	chr1:46841221-46842022	6 bp TSD	13 bp extra nucleotides	TGAATGTGTGAAA	5 bp MH		5' truncated	395	LOOPERN4_DR	8.2
CR1-2_DR (ZfL2-2)	chr5:646454-647033	6 bp TSD	48 bp extra nucleotides	TACTCATGTAATACACAAGTAATACATGAGTAATACTCAACTATTTAG	5 bp MH		5' truncated	252	DNA21TA1_DR	8.4
CR1-2_DR (ZfL2-2)	chr5:50913478-50914483	6 bp TSD	9 bp extra nucleotides	TTCAAATCA	4 bp MH		5' truncated	256	DNA25TWA2_DR (-)	8.2
CR1-2_DR (ZfL2-2)	chr6:5770693-5771606	6 bp TSD	9 bp extra nucleotides	TATGTTCGC	4 bp MH		5' truncated	356	SINE3-1	2.6
CR1-2_DR (ZfL2-2)	chr7:5077243-5077562	6 bp TSD	2 bp extra nucleotides	TT	3 bp MH		5' truncated	58	LOOPERN5_DR (-)	9.8
CR1-2_DR (ZfL2-2)	chr5:8006300-8006979	6 bp TSD	6 bp extra nucleotides	TTTAGG	3 bp MH		5' truncated	238	TDR18	7.1
CR1-2_DR (ZfL2-2)	chr19:22472877-22473641	6 bp TSD	41 bp extra nucleotides	ATGGAATGACATATGTTTGACATGACATATGACATGACATA	3 bp MH		5' truncated	323	HARBINGERN4_DR (-)	6
CR1-2_DR (ZfL2-2)	chr19:46553659-46555157	6 bp TSD	2 bp extra nucleotides	GA	2 bp MH		5' truncated	572	TDR2	6.6
CR1-2_DR (ZfL2-2)	chr2:29663297-29664475	6 bp TSD	9 bp extra nucleotides	TTTTTTTTT	2 bp MH		5' truncated	768	PROTOP1_DR (-)	9
CR1-2_DR (ZfL2-2)	chr20:13886135-13886556	7 bp TSD	15 bp extra nucleotides	TTTGTAAGTCATTTG	5 bp MH		5' truncated	59	HE1_DR1	7.9
CR1-2_DR (ZfL2-2)	chr13:5402272-5404493	7 bp TSD	8 bp extra nucleotides	ATGGACAT	4 bp MH		5' truncated	969	LOOPERN1_DR (-)	6.2
CR1-2_DR (ZfL2-2)	chr14:59025120-59025865	7 bp TSD	1 bp extra nucleotides	A	3 bp MH		5' truncated	272	LOOPERN4_DR (-)	8.6
CR1-2_DR (ZfL2-2)	chr12:28806603-28807241	7 bp TSD	6 bp extra nucleotides	GATTAA	2 bp MH		5' truncated	384	TDR20	3.7
CR1-2_DR (ZfL2-2)	chr19:37480-40251	7 bp TSD	10 bp extra nucleotides	AATAGAGTCT	2 bp MH		5' truncated	2300	HATN1_DR (-)	8.7
CR1-2_DR (ZfL2-2)	chr7:39522551-39523874	7 bp TSD	3 bp extra nucleotides	ATC	1 bp MH		5' truncated	808	TDR18	8.3
CR1-2_DR (ZfL2-2)	chr6:19556564-19558184	7 bp TSD	8 bp extra nucleotides	CTTGAGGT	1 bp MH		5' truncated	1165	DNA15TA1_DR	6.4
CR1-2_DR (ZfL2-2)	chr1:56245053-56245427	12 bp TSD	4 bp extra nucleotides	ACAC	4 bp MH		5' truncated	136	TDR18	9.8
CR1-2_DR (ZfL2-2)	chr8:21051446-21052738	3 bp TSD	8 bp extra nucleotides	AAAATGAT	direct		5' truncated	61	TDR1	6.8
CR1-2_DR (ZfL2-2)	chr23:33701373-33702666	6 bp TSD	6 bp extra nucleotides	TCTGTT	direct		5' truncated	757	TDR18 (-)	6.8
CR1-2_DR (ZfL2-2)	chr5:37731042-37731836	7 bp TSD	6 bp extra nucleotides	TCGACT	direct		5' truncated	487	HARBINGERN5_DR	7.8
CR1-2_DR (ZfL2-2)	chr16:36507216-36508826	blunt	2 bp MH		2 bp MH		5' truncated	885	TC1DR3	7.6
CR1-2_DR (ZfL2-2)	chr10:34796773-34797101	blunt	5 bp MH		2 bp extra nucleotides	AA	5' truncated	219	TDR18 (-)	7.3
CR1-2_DR (ZfL2-2)	chr23:903651-904282	2 bp TST	2 bp MH		2 bp MH		5' truncated	253	DNA9NNN1_DR (-)	9.5
CR1-2_DR (ZfL2-2)	chr1:13975632-13976195	4 bp TST	2 bp MH		2 bp MH		5' truncated	242	DNA25TWA1_DR (-)	9.2
CR1-2_DR (ZfL2-2)	chr22:9031956-9032525	5 bp TST	1 bp MH		1 bp MH		5' truncated	242	TC1DR3	8.9
CR1-2_DR (ZfL2-2)	chr12:11804689-11805788	69 bp TST	1 bp MH		3 bp MH		5' truncated	119	HATN5_DR (-)	4.3
CR1-2_DR (ZfL2-2)	chr3:41410267-41411210	381 bp TST	2 bp MH		5 bp MH		5' truncated	304	HATN13_DR (-)	9.8
CR1-2_DR (ZfL2-2)	chr14:3161613-3162741	2 bp TST	2 bp MH		32 bp extra nucleotides	ATCATTGATATGTTCAGTGATAAGGTAAATAA	5' truncated	493	HATN5_DR	6.1
CR1-2_DR (ZfL2-2)	chr4:13405412-13405687	14 bp TST	2 bp MH		5 bp extra nucleotides	CACTG	5' truncated	63	TDR20	7.2
CR1-2_DR (ZfL2-2)	chr20:4084708-4085678	31 bp TST	4 bp MH		33 bp extra nucleotides	AAAAAAAAACACACACACACACACACAAAAAGG	5' truncated	591	HARBINGERN5_DR (-)	8.6
CR1-2_DR (ZfL2-2)	chr20:41076825-41077706	4 bp TST	14 bp extra nucleotides	ATACTAATTTCAAA	5 bp MH		5' truncated	649	HATN8_DR (-)	8.6
CR1-2_DR (ZfL2-2)	chr15:10282832-10283942	4 bp TST	7 bp extra nucleotides	GTTTAAT	2 bp MH		5' truncated	773	HARBINGERN4_DR (-)	10
CR1-2_DR (ZfL2-2)	chr16:41323511-41324474	7 bp TST	21 bp extra nucleotides	CAATGTGTATTCCTTTCCTTC	3 bp MH		5' truncated	225	TDR2 (-)	6.4
CR1-2_DR (ZfL2-2)	chr13:32726805-32728013	66 bp TST	46 bp extra nucleotides	TTAATTCAGTTTAATTAGCTATTAAAACGGTCCCTATTAGAACGGT	4 bp MH		5' truncated	1019	TDR18 (-)	9.6
CR1-2_DR (ZfL2-2)	chr15:22694312-22694976	549 bp TST	30 bp extra nucleotides	AAATAGCAACACGTCGGGGCAAACATTTCA	1 bp MH		5' truncated	59	DNA9NNN1_DR	9.5
CR1-2_DR (ZfL2-2)	chr14:3208175-3209760	47 bp TST	31 bp extra nucleotides	CACAATGTGATAAATATATGCATATATCCCT	direct		5' truncated	483	ACROBAT1 (-)	9.6
CR1-2_DR (ZfL2-2)	chr19:50399039-50399751	3 bp TST	2 bp extra nucleotides	TA	6 bp extra nucleotides	CCATAA	5' truncated	238	SINE3-1 (-)	10
CR1-2_DR (ZfL2-2)	chr20:45469169-45470644	5 bp TST	1 bp extra nucleotides	C	4 bp extra nucleotides	CAAC	5' truncated	1230	TDR18	9.6
CR1-2_DR (ZfL2-2)	chr20:20894270-20895272	5 bp TST	12 bp extra nucleotides	GTGCTAAGACAT	7 bp extra nucleotides	TGACTAA	5' truncated	321	TC1DR3 (-)	9.4
CR1-2_DR (ZfL2-2)	chr3:38610532-38611865	5 bp TST	16 bp extra nucleotides	AGTGCAGATTCGCACT	13 bp extra nucleotides	GAGTTGAACTGAG	5' truncated	737	TC1DR2	10
CR1-2_DR (ZfL2-2)	chr23:39541358-39542094	5 bp TST	5 bp extra nucleotides	TCATT	58 bp extra nucleotides	CATATAAATAAAATAAAATAAATAAATAAACAAAAATAAAAAAACAGAAAAAAATAAA	5' truncated	263	HATN1_DR (-)	6.7
CR1-2_DR (ZfL2-2)	chr24:1560131-1561119	11 bp TST	21 bp extra nucleotides	ACTTTCCTAAGAAGGAAAGTT	12 bp extra nucleotides	ACACGCACGTGC	5' truncated	152	HARBINGERN5_DR	9.8
CR1-2_DR (ZfL2-2)	chr18:1579559-1580877	48 bp TST	17 bp extra nucleotides	ATTTTCCAAGATATTAT	6 bp extra nucleotides	GTATTT	5' truncated	1029	TDR18	8.4