CLUSTAL X (1.81) multiple sequence alignment


1L_1.1          ------------------------------------------------------------
1R_Un.350       ------------------------------------------------------------
2.43            ------------------------------------------------------------
3.39            --------------AGCAAGCAAATAGTTAAATAGTTAAAAAATTCTTTACAGTAACGCG
4.27            ------------------------------------------------------------
5.33            ------------TTTTTAAAATCGCATTATACGGATTATCTTACATATTATACAGTTCAT
6.55            -----------------------------------------TAAAATAAATGTTCTCACG
7.47a           ------------------------------------------------------------
7.47b           ------------------------------------------------------------
8_Un.1136       ------------------------------------------------------------
9_Un.20         ------------------------------------------------------------
10.45           ----------------CACTATAATATTCATAAGGTATTATTAATTTTCATTTTATTTTT
11.42           CGTTCGCTATAATATTCGTAATAATATTCCAATAATATTCGTAACGTTA--TTAATTTTA
12.30           ------------------------------------------------------------
13_Un.90        --------------------------TTCGTAACGTATTATTAATTTTCACTTTACTTTT
14.25           ---------------------TAATATTCGTAACGTATTATTAATTTTCACTTTACTTTT
15.40           ------------------------------------------------------------
16.21           ------------------------------------------------------------
                                                                            

1L_1.1          ------------------------------------------------------------
1R_Un.350       ------------------------------------------------------------
2.43            ------------------------------------------------------------
3.39            TACAAAATCCGCGATGGTTAATCAAACATAGTAATATTTTTTCGATATTATTTCGAATTA
4.27            ------------------------------------------------------------
5.33            ACGGATCGTAATATTTTATCATACCAACGTTCGAGGCTAAGAGAGGGAGAAAAGGAGATA
6.55            TTACAGAATCAAAATGATTCCGGCAGTCAAAATTCTAGTTCTCATCAAAATCTCGGAGGA
7.47a           ----------------------------------------------------TTGAAAAT
7.47b           --------------------------TTGAAAATTAACCGGCATAGTTTATTTTATACCA
8_Un.1136       ------------------------------------------------------------
9_Un.20         ------------------------------------------------------------
10.45           ACATTTTATCACTCGTTAATATATTACTCCGTTAGATTCGTTTCGTTATTTTTCGTTTCT
11.42           CTATTTTATCAATCGGTGTTATATCATTACGATACGTTTGTTTTATTATTTTTCGTTTCT
12.30           ------------------------------------------------------------
13_Un.90        ACATTTTATCAATCGTTAATATATCACTCCGTTAGATTCGTTTCGTTATTCTTCGTTTCT
14.25           ACATTTTATCAATCGTTAATATATCACTCCGTTAGATTCGTTTCGTTATTCTTCGTTTCT
15.40           ------------------------------------------------------------
16.21           ------------------------------------------------------------
                                                                            

1L_1.1          ------------------------------------------------------------
1R_Un.350       -------------------------------------------TTTATTTGCAATAACGT
2.43            ----------CGAACCTAATTCTTTTTTATTTAAATTTAAAATATTGGTTATAATTAACG
3.39            ATGTTAACACCTCAAGTTAACATCCAAATGCCGATATTTTATCGGGAATTTTAACTCGTA
4.27            ------------------------------------------------------------
5.33            GAATTTTAATTTTTTTTTTTAAATTCTAAATTATTGTTTATAATTAACGTTACATTATCG
6.55            TAGAATTTTAATTTTTTTTTAAATTCTAAATTATTGTTTATAATTAACATTATATTATCG
7.47a           T--AACCGGCATAGTTTATTTTATACCAAATAATTTTTTA-ACTTTATTTATTATTAAAT
7.47b           AATAATCTTTTAACTTTATTTATTATTAAATTCGTTTAACGTAACGACGCACGAAGAAAA
8_Un.1136       ------------------------------------------------------------
9_Un.20         ------------------------------------------------------------
10.45           TTAAAATTTAATGATTTAATT---------TTTTTTTATCGATAATATTTTCGATAATTA
11.42           TTAAAATTTAACAATTTAATT--------TTTTTAATATCGATAATATTTTTGATAGTTA
12.30           -----------CTTTTTCCTACTCCATCTACAAAGAACTTTGAAACAAATTTAAATATAG
13_Un.90        TTAAAATTTAATGATTTTTTCGATCGAATTTTTTTTTATCGATAATATTTTCGATAATTA
14.25           TTAAAATTTAATGATTTTTTCGAT-CGAATTTTTTTTATCGATAATATTTTCCATAATTA
15.40           ------------------------------------------------------------
16.21           ------------------------------------------------------------
                                                                            

1L_1.1          ------------------------------------------------------------
1R_Un.350       TCGTGCGCACAACTTGGAATCGAAAATCGTTTAACAACATCTCAGAAATT---------A
2.43            TTACATATATCGTTGTTTTTGGCAAAGAGAAACGAAGAAAAAATGATAACGA-------G
3.39            CTTAACGCAATATCGTACTTTATAAAAAATTTTTTCACGTAGAGAGGATTATCGTCATCG
4.27            ------------------------------------------------------------
5.33            TTGTTTCAGGCAAAGAGAAACGAAGAAAAAACAATAAAGAGATAAACAC----------G
6.55            TTGTTTCAGGCAAAGAGAAACGAAGAAAAAACGATAACGAGATAAACAC----------G
7.47a           TCGTTTAACGTAACGACGCACGAAGAAAAC-TATTAACAAACATAAGGT----------A
7.47b           CTATTAACA--AACGTAAGGTAAGAAATATCGATTATCGATATTATTAATTTA-----CT
8_Un.1136       -------------------------ATTATTAATTTATAAGACGCGTA-----------A
9_Un.20         ------------------------------------------------------------
10.45           ATTTTTTTT-AATTTTTTTTTCATTATTATTAATTTATAAGACGCGTA-----------A
11.42           GTCTTTTCT-AATTTTCTCTTCATTACTATTAATTTATAAGATTTATAAG--------TA
12.30           TAACAAATTCAAACATTATAAGCATTTTGTCAATTCGAAAAATTCTTTTTATA-TCCTTC
13_Un.90        GTTCTTTTTTAATTTTCTTTCCATTATTATTAATTTATAAGACGCGTAA----------A
14.25           GTTTTTTTTAAATTTTCTTTCCATTATTATTAATTTATAAGACGCGTAA----------A
15.40           ---------------------------------------------------------TAA
16.21           ------------------------------------------------------------
                                                                            

1L_1.1          ------------------------------------------------------------
1R_Un.350       ATAAATATTCGA--AGCTAAAATTTTTTTGCTTAAGGTTTCTCGTCTTTTTTCTCCATTA
2.43            ATAAACATCGAAGGATTTCCTTATTCTTTATTTTTCTTTTTATCGTTTTTTTTTCGATCA
3.39            AAGACAGAGCGACGATATTCATCGACGTAAAACATCGCATCATTCACGGTATCAAAAATA
4.27            ------------------------------------------------------------
5.33            ATAAACATCGAAGGATTTTTTTATTCTTTATTTTTCTTTATATCGATTTTTTTTTCA--A
6.55            ATAAACATCGAAGGATCTCTTTATTCTTTATTTCTCTTTTTATCGATTTTTTTCCGATTA
7.47a           AGAAATATCGAT---TATCGATATTATTAATTTA--CTATTACCAATACTTT----ATAA
7.47b           ATTACCAATACTTTATAATCAATCAAATTATATATTATATAAATTATATTATATATCAAA
8_Un.1136       AAAAAGGTTCAAAGATTTCTTTTGTTTATTTTCTTAATTTATTGGTTATTTT--------
9_Un.20         ------------------------------------------------------------
10.45           AAAAAGATTCAAAGATTTCTTTCGTTTATCTTCTTAATTTTCCGGTTATTTTC------A
11.42           AAGAAGATTTAAAGATTATTTTTGTTTATTTTTAT--TTTTCTTAATCTCTT--------
12.30           GTAAGAATTATCGTGTCTCTACAAGCCGTGTCTACTCAAAAAATAAAAATTATCGATTCA
13_Un.90        AAAAAGACTGAAAGATTTCTTTTGTTTATTTTCTTAATTTTCTGGTTATTTTC------A
14.25           AAAAAGGTTTAAAGATTTCTTTCGTTTATTTTCTTAATTTTCTGGTTATTTTCAGTAT-A
15.40           AAAAAGGTTTAAAGATTTCTTTCGTTCATCTTCTTAATTTTGCGGTTATTCTC------G
16.21           -------------------------------------------------------GTTAT
                                                                            

1L_1.1          -----------------------CTTTTATCTTTAATCTTT------AAACGAAATTTTA
1R_Un.350       ATTCAAA-ATTTCGTTTCCCCTCGTATCAT-TCCGGACGCG----CTAATTTCTTTTTCT
2.43            TCATAAATGCTTTCTTTTC-TGAAAAACGTATTTATACGTT----ACACGATTATTTTCC
3.39            CACGTATGGAGATCATTTTGGTTCTTTTATCTTTAATCTTT------AAACAAAATTTTA
4.27            ------------------------------------------------------------
5.33            TTATAAATACTTTCTTTTTCTCGAAAACATATTTATACGTTAT--ACGTTATTATTTTCC
6.55            TCGTAAATATTTTCTTTTTCTCGAAAACGTATTTATACGTT----ATACGGTTATTTTCC
7.47a           TC--AATCAAATTATCATACTCGATAA-ACTTTTATTCGTTTA--ATCGGAATATTATAA
7.47b           TTATATATTATATATCATACTCGATAA-ACTTTTATTCGTTTA--ATCGGAATATTATAA
8_Un.1136       ---TGTTGGAATTATCAGTATATTAAATTCATCTATTCGTT-----TACATTCGAT-TAA
9_Un.20         ------------------------------------------------------------
10.45           TTGCAAT--TATCAGTATCAGTTTAAATCGATCTAATCGTT-----TACATTTGGT-TAA
11.42           GGTTATTTTCGTTGGAATTATCAGTATCGT-TTAAATCGAT----CTACATTTGATTAAA
12.30           TAACCTAAGCATTACGAATCAAAGGAAAGTAAGTATAATTTGAATCTAAAGTCGAGCAAA
13_Un.90        TTGTAAT--TATCAATATCGTTTAAATC-TATCCAATCGTT-----TACATTTGGTTAAA
14.25           TTTTGGAATTATCAGTATCGTTTAAATC-TACCCAATCGTT-----TACATTTAGT-TAA
15.40           TTCCAAT--TATCAGTATCGTTTAAATC-TATCCAATCGTT-----TACATTTAATTAAG
16.21           TTTTGTTGGAATTATCAGTATATTAAATTCATCTATTCGTT-----TACATTCGAT-TAA
                                                                            

1L_1.1          ATCTTT---TTCAATTTCATTCACAATTTATACGAATTAATATTTTATTATAACGCTCGA
1R_Un.350       TTTTTTAAATTTATCATATTTTCTAATTTTTATTTTTGGAATT----------TGACTCA
2.43            GCATTTAAGTTATTCGTTTTTTTCTTTTTCTAATTCTTATATTTTTAAATTAATAGCTAA
3.39            ATCTTT---TTTAATTTCATTTATAGTCTATACGAATTAATATTTTATCGTAACGTTCGA
4.27            ------------ATTTTTTTTTCCGATTTATAAAGAGTAATGTTTTCCGCTCGCAACCAT
5.33            GTATTCAAATTATTCGTCTTTTTCTTTTTCTAATTTTTATATCTTTAAACT--TAATTAA
6.55            GTATTCAAATTATTCGTCTTTTTCTTTTTCTAATTTTTATATTTTTAAACT--TAATTAA
7.47a           ATCATGGAAGAAAAATGCTATTTCGATTTAAGCAAAGCAAAGTAACAGAGCAATAAATAT
7.47b           ATCATGGAAGAAAAATGTTATTTCAATTTAAGCAAAGCAAAGTAACAGAGCAATAAATAT
8_Un.1136       GTTTTC-----TATTTTTTTTTCCACATTATAAAGAGCAATGTTTCTCGCTCGCAACCAT
9_Un.20         ------------------------------------------------------------
10.45           GTTTTT---TATTTTTCCTTTTCCACATTATAAAGAGCAATGTTTCCCGCTCGCAACTAT
11.42           TTTTTTA---TTTTTTCTTTTCCCGCATTATAAAGAGCAATGTTTCCCGCTCGCAATCAA
12.30           CTAAAACAACGTTTATATTATACACGCGTAAAAATAATAATATTAAAAAAAATAAATTCA
13_Un.90        CTTTTT---ATTATTTTTTTTTCCGCATTATAAAGAGCAACGTTTCCCGCTCGCAATTTC
14.25           ACTTTTTATTATTTTTTTTTTTCCGCATTATAAAGAGCAACGTTTCCCGCTCGCAACCAC
15.40           CTCTTTG---TTATTTTTTTTTCCGCATTATAAAAAACAACGTTTCTCGCTCGTAACCTC
16.21           GTTTTT----TATTTTTTTTTTCCACATTATAAAGAGCAACGTTTCCCGCTCGCAACCAT
                                                                            

1L_1.1          GATCAAAGG-------------GAAAAAAAAGATA---GAATTT--TAAGCTTTTTTTTT
1R_Un.350       TGACTAATA-------------CGATCAAACGGTATTTTAATTT--TAACTCTTGATAT-
2.43            TACGATTAATA-----------CGATTAAAGAATATTTCGATTT--TAACTTTTGATAT-
3.39            GAGGAAAAAAAACGCTCC-AAAGAGGAAAAAAAAGATAGAATTT--TAAGTTATTTTTT-
4.27            CTCAAACCA----------------TCGTATCATTATTGTATCT--TTAGAGATACAGC-
5.33            TAATACTATTA-----------CGATTAAACGATATTTCGATTT--TAATTTTTGACAT-
6.55            TAGTTAATA-------------CGATTAAACGATATTTCGATTT--TAATTTTTGACAT-
7.47a           CGCGTAATT-------------GTATTTAAATATTCTTATAGAA--TAAATCGAATCGTT
7.47b           CGCGTAATT-------------GTATTTAAATATTCTTATAGAA--TAAATCGAATCGTC
8_Un.1136       CTCAAAAAAT------------CGTACGTATCATTACTGTATCT--TTGAAGATACAGCG
9_Un.20         --------------------------TAAAAAGTATTTTAATTT--TAATTTTTGATATC
10.45           CTCAAAAAAT------------CGTACATATCGCTACTGTATCT--TTGGAGATACAGCA
11.42           TCGTAAAAAAAAATCAA--AAAATCGTACTATACTACTATATCT--TCGGAGATACAGCA
12.30           TTCGAAATCAAGAATCCAATAACAAAGAATCTACCATCGAAAAAGATAATTCTCGATATA
13_Un.90        CCACCTCAAAAAT---------CGTACGTATCGCTTCTGTATCT--TTGGAGATACAGTA
14.25           TTCAAAAAT-------------CGTACGTATCGCTTCTGTATCT--TTGGAGATACAGCA
15.40           AAAAAATCGTA-----------TCGCTGTATCGCTACTATCTTT----GGAGATACAGCA
16.21           CTCAAAAAAT------------CGTACGTATCGTTACTGTATCT--TTGGAGATACAGCA
                                                                            

1L_1.1          TTTTTTAAATTCTAAATT-ATCGTTTATACGGATTAACGTTATATCATTATTTCAAAAAA
1R_Un.350       -CTTGATATCGGAA-AT--ATAAAAGAAAAAAAATACGTAAAT---CGAA-AGCGAAA--
2.43            -ATTAATATTCGAA--AT-ATAAGAGAAAAAGAAAAAA---AAATATGTAAATTGAAA--
3.39            -TTTTAAATTCTAA-ATT-ATCGTTTACGCGGATTAACGTTATATCGTTATTTCGTTGTT
4.27            ---AAAAGTTTACACAAG-TTTAATTCTAAAGATTCTC---ATATTTATACGACGATAGC
5.33            -ATCAATATTCGAA-----ATATAAGAGAAAAAGAAAAAAAAAATACGTAAATTGAAAAT
6.55            -ATTAATATTCGAA-AT--GTAAGAGAAAAAGAAAAAAAAAAAATACGTA-AATTGAAAA
7.47a           GAATAAAATTAAGA-ATA-GTAAGAGATGACGATTAAATATAA-TAAATA-TACGAAACC
7.47b           GAATAAAATTAAGAATAG--TAAAAGATGACGATTAAA--TATAATAAATATACGAAACC
8_Un.1136       ATCGAAAGTTTGCACAAG-TTTAATTCCAAAAATTCTTGTCATATTTAGACGATAGCG--
9_Un.20         -TTATATATATATATATA-ATATTTGAAATATAAAAAAAAATATTTAAATTGAAAATAAA
10.45           GTCGAAAGTTTGCACAAG-TTTAATTCCAAAGATTCTTCTCATATTTAAACGATAGCGTT
11.42           GTCGAAAGTTTGCACAAGTTTTAATTCTAAAGATTCTTCTCATATTTAGACGATAGCG--
12.30           TCAAACCGTTTAAAACGCCTTAGAAGAAAGAGAATATCAAAATCAAGGCTTAATTTTTTC
13_Un.90        GTCGAAAATTTGCACAAG-TTTAATTCCAAAGATTTTCCTCATATTTATACGATGATAGC
14.25           GTCGAAAATTTGCACAAG-TTTAATTCCAAAGATTCTCCTTATATTTATACGACGATAAC
15.40           GTCGAAAATTTACA-------CAATTTCAAAGATTCTCTTCATATTTATACGACGATAGC
16.21           ATCGAAAGTTTGCACAAG-TTTAATTCCAAAGATTCTTGTCATATTTAGACAATAGCG--
                             *                  *                           

1L_1.1          --GAAAAAAAAGAA--------ACGAAGAA---AGAATAACGATACGATTACGCGATTTC
1R_Un.350       -TAAAAGAAAGGAA--------TCGGATGATTCGAGATTTTTGTTTAATTCATCTATTTT
2.43            ---ATAAAATTAAA--------TAAAAGGATTCGAAATTTTTGTTTTATTCATCGATTTT
3.39            TTAAACAAAAAGAA--------ACGAAGGA---AGAATAACGATACGATTACGCGATTTC
4.27            GTCCAAAGTAGAAGCGTCCTCGACGTAGAATAACGAATGAAAATTAAATCGAAAGAGCAA
5.33            -TAAATAAAAGCAA--------TCGAACGATTCGAAATTTTAGTTTCATTCATCGTTTTT
6.55            TTAAATAAAAGAAA--------TCGAACGATTCGAAATTTTTGTTTTATTTATCGTTTTA
7.47a           GTTTAAAACGTGTA--------ACAAAAGAAAGAGAATATACACAACGCTGAAACTTTTA
7.47b           GTTTAAAACGTGTA--------ACAAAAGAAAGAGAATATACACAACGCTGAAACTTTTA
8_Un.1136       -TCCAAAGTCCTCG--------ACGTAGAATAACGAATAAAAATTAAATCGAAAGAGCAA
9_Un.20         ATAAAAGAAAAGAA--------TCGAATGATTCGACATTTTTGTTTTATTTATCGATTT-
10.45           -CATTTCAACGATA--------GTTCTCGACGTGGAATAACGATTAAATCGAAAGAGCAA
11.42           -TCCAAAGTTCTCG--------ACGTAGAATAACGAATAAAAAATAAATCGAAAGAGGAA
12.30           GTAGAAAACCGTTATTTAATCTTTATATTAAATAATCTTTATATTAATCTTTATATTAAA
13_Un.90        GTTCAAAGTCCTCA--------ACGTAGAATAACGAATGAAAATTAAATCGAAAGAGGAA
14.25           GTTCAAAGTCCTCA--------ACGTAGAATAACGAATGAAAATTAAATCGAAAGAGGAA
15.40           GTTCAAAGTCCGCG--------ACACAGAATAACGAATGAAAATTAAATCGAAGAAGCAA
16.21           -TCCAAAGTCCTCG--------ACGTAGAATAACGAATAAAAATTAAATCGAAAGAGCAA
                                             *       *                      

1L_1.1          TG------------GATCATTTTTTTATTAT-----------TATTTCTTTTTTTATTTC
1R_Un.350       AA-----------TTATTATAATTCTTTCC--------------TTTCTTTCTTTATATT
2.43            AATTATTATA----TTCCTTACACTCCTTCCCTTTTTCTTTAAGTCTCATTTATCGTCTA
3.39            TG------------GATCATTTCTTTATTAT-----------TATTTCTTTTTTTATTTT
4.27            CGTTTCT------CGATCGCAACCACATCAGAAA---------ATCGTAGCTATTATCTT
5.33            AATT-----------ATTATATCCTCCTTCCTTTTTTCTTTAAATTTCATTTATCGTCTA
6.55            TTATATTCCTTTATTATTATATCCCTCTTCCCTTTTTCTTTAAATCTCATTTATCATTTA
7.47a           GAAAAA------ATTAATATAAATTTATCAACGTTGTAAT-ATATCTTTTTTTTTACTTT
7.47b           GAAAAAA------TTAATATAAATTTATCAACGTTGTA---ATATTTTTACTTTTAGATT
8_Un.1136       CGTTTCCG------GATCGCAATTACGTCAGAAAATCATAGGTATCGC---TATTATCTT
9_Un.20         -------------------------TATTA------------TATTCTTTTTTTTACGTT
10.45           CGTTTCC------CGATCGCAATCACATCAGAAAATCGTAGGTATCGC---TATTATCTT
11.42           CATTTTC------CGATCGTAACCATATGAGAAAATCGTAGGTATCGC---TATTATCTT
12.30           TAAATTAAATA---TATTTAATCTTTATATTAAATAAATTAAATACAAATTCACGAAACG
13_Un.90        CGTTTCC------CGATCGCAACCACATCAGAAAATCGTAGATATCGC---TACTATCTT
14.25           CGTTTCC------CGATCGCAACCACATCAGAAAATCGTAGGTATCGC---TATTATCTT
15.40           TGTTTTC------CGATCGTAACCATATCAGAAAATCGTAGGTATCGC---TATAATCTT
16.21           CGTTTCCG------GATCGCAATTACATCAGAAAATCATAGGTATCGC---TATTATCTT
                                           *                                

1L_1.1          ------TTTATC------GTTCA-------TCGAATTTGTTTTTT--------------C
1R_Un.350       -TAGATTCGATT-----CGTTTCGTTC---TTTATTTTATCATAT-------CCTCGTAT
2.43            GAGGATTTTTTTTTTTATTTTTAGATTCGATTCGTTTCGTTCTTTATTTTATTCTCGTAT
3.39            ----TTTTTATC------GTTCG----------AATTCGTTTTTT--------------C
4.27            CGGAGATACAGC-----GGTTCAAAGTTTATAAAATTTTAAAGATT-AAAAAATTTCCTC
5.33            GAGGATTTTTTTTTT-ATTTTTAGATTCGATTCGTTTCCTCCTTTATTTTATTCTCGTAT
6.55            GTGGATTTTTTTTT--ATTTTTAGATTCGATTCGTTTCGTTTTTCT-ATTTTATTCGTAC
7.47a           -TAGATTAGATTAC--TCGTTTCGTTCCTTTTTATCATATCCTTC--AAGGAATAAATAT
7.47b           ---AGATTATTC------GTTTCGTTCTTTTTTATCATATCCTTCA--AGGAATAAATAT
8_Un.1136       CGGAGATACAGC-----GGTTCAAAGTTTACACAATTTTAAAGATT-AAAAAATTTCCTC
9_Un.20         ------TCGACT-----CGTTTCGTTC---TTTATTTTATCTTCG------------TAT
10.45           CGGAGATACAGC-----GATTCAAAGTTTACAAAATTTTAAAGATT-AAAAAATTTCCTC
11.42           CGGAGATACAGC-----GATTCAAAGTTTACACAATTTTAAAGATT-AAAAAATTTCCTC
12.30           TTGAAATATTTTCTC-AATGTTAAATTAATCTCGCTCTTTATTTCATCGTATTTTTGTAT
13_Un.90        CGGAGATACAGC-----GGTTCAAAGTTTACAAAATTTTAAAGATT-AAAAAATTTCCTC
14.25           CCGAAATACAGC-----GATTCAAAGTTTACAAAATTTTAAAGATT-AAAAAATTTCCTC
15.40           CGGAGATACAGC-----GGTTCAAAGTTTACACAATTTTAAAGATT-AAAAAATTTCCTC
16.21           CGGAGATACAGC-----GGTTCAAAGTTTACAAAATTTTAAAGATT-AAAAAATTTCCTC
                      *             *                                       

1L_1.1          GAAAGCGTTATACGATTATTCTCCGTATCAAG--------TTTTATACATTTCTTTCTAT
1R_Un.350       TCGACGACAATTTGATTCTTCATTTTACCAATTTAGATAATTTTAATTATATTTTTATAC
2.43            CGAAAGAATATTTGATCTTCCCTTTCATCGATTCACGTATTCATAATTAT--TCTTACAC
3.39            GAAAGCGTTATACGATCATTTTCCGTATCAAG--------TTTTGTACGTTTTTTCCTAT
4.27            TCCTTGGAACTGGAATTTATTATATAACTTAT--AAAATTCGTTAATAAT--CTTTATAC
5.33            CGAACGAATATTTGGTCTTCCCTTTCATCGATTCGCGTATTCATAATTAT--TCTTACAC
6.55            CGAACGAATATTTGGTCTTCCTTTTCATCGATTCACGTATTCATAATTAT--TCTTACAC
7.47a           TCGATGAATATTTATTTCTTCTTTTTATCAATTTACATATTTATAATTATATTCTTATAC
7.47b           TCCATGAATATTTATTTCTTCTTTTTATCAATTTACATATTTATAATTATATTCTTATAC
8_Un.1136       TCCTCGGAA---CGATTTATTATATAACTTAT--AAAATTCATTAATAAT--CTTTACAC
9_Un.20         TCGATGAATATTTAATTCTCCTTTT---CGATTTACATATCAATAATTGTATTCTTACAT
10.45           TTCTTGGAATTGGAATTTATTATATGACTTAT--AAAATTCGTTAATAAT--CTTTACGC
11.42           TCCTCGGAA---CGATTTATTATATAACTTAT--AAAATTCATTAATAAT--CTTTACAC
12.30           CGGACGAATATTAGGTTTTTCCCTTTATCGATTTACGATTTATCAACT-TATAATTATAT
13_Un.90        TGCTTGGAACTAAAATTTATCATGTAATTTAT--AAAATTCGTTAATAAT--CTTTACAC
14.25           TCCTTGGAACTGGAATTTATTATATAACTTAT--AAAATTCGTTAATAAT--CTTTACGC
15.40           TCTTCGGAA---CGATTTATTATATAACTTAT--AAAATTCATTAATAAT--CCTTACAC
16.21           TCCTTGAAACTAGAATTTATTATATAACTTAT--AAAATTCGTTAATAAT--CTTTACGC
                               *              *                  *    *     

1L_1.1          ------------TAATTTTTATTATTTTAAT-------ATTTACATTTTAATATTTCACT
1R_Un.350       ACATAAATTTTACATATCTTATTTATTCAACGAT---CATTTACATTTTAATATTTTACT
2.43            ---------TTTCATATTTTCTTTATTCAACGAT---CATTTGCATTTTAATATTTTACA
3.39            ------------TAATTTTTATCATTTTAAT-------ATTTACATTTTAATATTTCACT
4.27            -------TATAATATTTTTATTTTATTTAATAAA---TTTTTACACCGTAATATTTTATT
5.33            ---------TTTTATATTTTATTTATTCAACGAT---CGTTTACATTTCAATATTTTACG
6.55            ---------TTTCATATTTTCTTTATTCAACGAT---CATTTGCATTTTAATATTTTACA
7.47a           ---------TTTTATACTTTATTTATTCAACGAT---CATTTACATTTTAATATTTTATT
7.47b           ---------TTTTATACTTTATTTATTCAAGAAT---CATTTACATTTTAATATTTTATT
8_Un.1136       -------TACAATATTTTTATTTCATTTAATTAA---TTTTTACACTATAATATTTTATT
9_Un.20         ---------------ATTTTATTTATTTAACAAT---TACTTACATTTTAATATTTTATT
10.45           -------TACAATATTTTTATTTTATTTAATAAA---TTTTTACACTATAATATTTTATT
11.42           ---------TAATATTTTTATTTCATTTAATTAA---TTTTTACACTATAATATTTTATT
12.30           ---------TTTTATATTTTATTTATTTAACAATGACTTATTACATTTTAACATCGTACT
13_Un.90        -------TACAAAATTTTTATTTTACTTAATAAA---TTTGTATAATACACTATAATATT
14.25           -------TACAATATTTTTGTTTTATTTAATAAA---TTTGTACATTATAATATTTTATT
15.40           TA------CTAATATTCTTATATTTTTAAATAAA---TTTTTACATTATAATATTTTATT
16.21           -------TACAATATTTTTGTTTTATTTAATAAA---TTTTTACACTATAATATTTTATT
                                  *       * **           *  *    *  **   *  

1L_1.1          -TAATATATCGTATAGCGATAAAA---T----TTATTCGGAGAGCAGAAA-GATACACGT
1R_Un.350       -TAATATATCGTATATCGATAAAA---C----ATATATTATTCGAAGAAA-GGAATACGT
2.43            ATATTATATAAAATCCCGATAAAAATCT----TTAATCGAGAAGCAGAAA-GGAATACAT
3.39            -TAATATATCGTATAGCGATAAAA---T----TTATTCGGAGAGCAGAAA-GGTACACGT
4.27            -----------CACAGCGATAAGA-TCT----TTACTCGGAGAGCAGAGA-GAAACACGT
5.33            ATATCATAGAAAATCCCGATAAAA-TCT----TTAATCGAGAAGCAGAAA-GAAACACGT
6.55            ATATTATATAAAATCCCGATAAAAATCT----TTAATCGAGAAGCAGAAA-GGAATACAT
7.47a           -TAATATATCGTACATCGATAAAA-TTT----TTATTCAGAGAGCAGAAA-GGAAAACGT
7.47b           -TAATATATCGTACATCGATAAAA-TTT----TTATTCAGAGAGCAGAAA-GGAAAACGT
8_Un.1136       -----------TACAGCGATAAGT--CT----TTAATCGGAGAGCAGAGA-GAAACACTT
9_Un.20         -TAATATATCGTATATCGATAAAA-TCT----TTATTCGGAGAGCACAAG-GGAATACGT
10.45           -----------CACAGCGATAAAG-TCT----TTACTCGGAGAGCAGAGA-GAAACACGT
11.42           -----------GACAGCGATAAGT--CT----TTAATCGGAGAGCAGAGA-GAAACACTT
12.30           ATATCATATTATACGGTATATATATTATAAAATCTTTCGGGGAGCAGAAAGGAAATACGA
13_Un.90        TTAAT------CACAGCGATAAGG-TCT----TTATTCGGAGAGCAGA---GAAACACGT
14.25           -----------CACAGCGATAAGG-TCT----TTATTCGGAGAACAGAGA-GAAATACGT
15.40           --------------CACGGTGATTCTCT----TTACTCGGAGAGCAGAGA-GAAACACGT
16.21           -----------CACAGCGATAAAG-TCT----TTACTCGGAGAGCAGAAA-GAAACACGT
                                     *                       * *   *  * **  

1L_1.1          TCGTCTCGTTCCGTGTTCGAAAACCGACTACGTTTA-------------ATCGATA-CAT
1R_Un.350       CCGTTTCGTTTCGTGTTCGGAAATCGACTACGTTTA-------------ATCGATA-CGC
2.43            CCGTTCCGCTCGGTGTTCGGAAAACGACTACGTTCA-------------ATCGATGTCAC
3.39            TCGTCTCGTTCCGAGTTCGGAAACCGACTACGTTTA-------------ATCGATA-CGC
4.27            TCGTTTCATTCCGCGTTCGGAAATCAACTACGAATATATACGAATATATAATAATAATAT
5.33            CCGTTCCGCTCGATGTTCGGAAAACGAATACGTTGA-------------ATCAATGTCAT
6.55            CCGTTCCGCTCGGTGTTCGGAAAACGACTACGTTCA-------------ATCGATGTCAC
7.47a           TCGTACCGTTCCGTGTTCAGAAACCAACTACGTTTA-------------GTCGATA-CGT
7.47b           TCGTACCGTTCCGTGTTCAGAAACCAACTACGTTTA-------------GTCGATA-CGT
8_Un.1136       CCGTTTCGTGCCGCGTTCGGAAACCGACTACGAATATATAC--------AGTAATGATAT
9_Un.20         CCGTCCCGGTTCCGGGTTCGAAAGCGACTATGTTTA-------------ACCGATA-CAT
10.45           CCGTTTCGTTTCGCGTTCGGAAACCGACTACGAATATATAC--------AATAATG----
11.42           CCGTTTCGTTCCGCGTTCGGAAACCGACTACGAATATATAC--------AGTAATGATAT
12.30           CCGTCTCGTTCCGTATTCGGAAAACGACTACGCTTA-------------ATCGATA-CGT
13_Un.90        CCGTTTCGTTCCACGTTCGGAAACCGACTACGAATATATAC--------AATAATGATAC
14.25           CCGTCTCGTTCCGCGTTCGGAAACCGACTACGAATATATAC--------AATAATGATAC
15.40           -CGTTTCGTTCCGTGTTCCGAAACCGACTACGAATATATAC--------AATAATGATAC
16.21           CCGTTTCGTTTCGCGTTCGGAAACCGACTACGAATATATAC--------AATAATGATAC
                 ***  *         *   *** * * ** *   *                 **     

1L_1.1          ATACATATACAA---------------------------TATTCGACA------------
1R_Un.350       GTACAACAACAATCGAAGGAACACGTTCGTTTCGTTCCGTATTCGGAAACAGACTAC-GT
2.43            ATACAATAACAATTCGAAGAATAT-TTCGTTT-GCTTCGTATTCGGAAAACGATTA----
3.39            GTTCAATAACAATCGAAGGAATACGTCCGTTTCGCTTAGTACTCGGAAAACGATAAACGT
4.27            GTACAATAACCAAT-GTGTTATTATTTCTTAC-GATTCACGTTCGCTATAAT--------
5.33            ATAAAATAAT---TCGAAGAATAT-TTCGTTT-GCTTCGTATTCGAAAAACGATTA----
6.55            ATACAATAACAATTCGAAGAATAT-TTCGTTT-GCTTCGTATTCGGAAAACGATTA----
7.47a           ATGCAATAACAATCGAAGGAATAAATCCGTTTCGCTCCGTGTTTGGAAAACGACTAC-GT
7.47b           ATGCAATAACAATCGAAGGAATAAATCCGTTTCGCTCCGTGTTTGGAAAACGACTAC--G
8_Un.1136       ATACAATAACCGAT-GCGTTATTATTTCTCGC-GATTCACGTTCGCTATAAT--------
9_Un.20         ATACAAT-ACCATCGACACGACAT-CGCGCCATTATTTACGTTCACTATATTATTCG-CT
10.45           ATACAATAACCGATAGCGTTATTATTTCTGGC-GATTCACGTTCTATAAT----------
11.42           ATACAATAACCGAT-GCGTTATTATTTCTCGC-GATTCACGTTCGCTATAAT--------
12.30           ATACAACAACAATCGACGCGACAT-CGCGCCACGATTTACGTTCCCCG------------
13_Un.90        GTACAATAACCGATAGCGTTATTATTTCTGGC-GATTCACGTTCTATAAT----------
14.25           GTACAATAACCGATAACGTTATTATTTCGGGC-GATTCACGTTCGCTATAATATTC----
15.40           GTACAATAACCGAT-GCGTTATTATTTCTCGC-GATTCACGTTCGCTATAAT--------
16.21           GTACAATAACCGATAGCGTTATTATTTCTGGC-GATTCACGTTCTATAAT----------
                 *  *   *                                 *                 

1L_1.1          -----CGACA--------------------------------------------TTCACG
1R_Un.350       TTAATCGATACGTATACAA-TAACAATCGACG-CGCCGCGAT-TTACGTTCCCTATAATA
2.43            ---ACCGATACGTATACAA-TAATAATCG-----------ACATCGCGCGGCGATTCACG
3.39            TTAACCGATACACATACAA-TAACAATCGACATCGCGTCGCGATTTACGTTCCCGTAATA
4.27            ---ATTCATAATAACATTC-TAATAATAT-------------------ATAAAATTTTCA
5.33            ---ACCGATACGTATACAA-TAATAATCG-----------ACATCGCGCGGCGATTCACG
6.55            ---ACCGATACGTATA----CAATAATA--------ATCGACATCGCGCGGCGATTCACG
7.47a           AT-ACGAGTACGTTTAAT--CGACTATGTATA-CATAATGACATCGCGCTACGATTCACG
7.47b           TATACGAGTACGTTTAAT--CGACTATGTATA-CATAATGACATCGCGGTACGATTCACG
8_Un.1136       ---ATTCGTAATAATATTT-CAATAATAT--------------TCATAACGTTATTAATT
9_Un.20         A----TAATATTCGTAACT-TATTATTAA--------------TTTTCACTTTACTTTTT
10.45           ---ATTCGTAATAATATTT-TAATAATAT-----------------------TCGTAACG
11.42           ---ATTCGTAATAATATTC-CAATAATAT--------------TCATAACGTTATTAATT
12.30           -------------------------------------------------------TAATA
13_Un.90        ---ATTCGTAATAATATTT-TAATAATAT-----------------------TCGTAACG
14.25           ---GTAATAACATTT-----TAATAATAT------TCGTAACGTTATTATAAAATTTTCA
15.40           ---ATTCGTAATAATATTTGTAATTTTAT-------------------TAATTATTAATT
16.21           ---ATTCGTAATAATATTT-TAATAATAT-----------------------TCGTAACG
                                                                       *    

1L_1.1          TTC-GCTATAATATTCGT-AAGATTGTTAATTTTTAATTCATTT-TATTAATTTATCAAT
1R_Un.350       TTC-ACTATAATATTTCT-AAAATTATTAATTTTTAATTCACTT-TATTAATTTATCGAT
2.43            TTC-GCTATAATATTCGT-AAGATTATTAATTTTTAATTCACTT-TATTAATTTATCAAT
3.39            TTC-GCTATAATATTCGT-AAAATTATTAATTTTTATTTCATTT-TATTAATTTATCAAT
4.27            TTTTACTATTTTATCAACCGGTGTTATATCGTTACGTTACGTTCATTTTATTATTTTTCA
5.33            TTC-GCTATAATATTCGT-AAGATTATTAATTTTTAATTCACTT-TATTAATTTATCAAT
6.55            TTC-GCTATAATATTCGT-AAGATTATTAATTTTTAATTCACTT-TATTAATTTATCAAT
7.47a           TTC-GCTATAATATTCGT-AAGAATATTAATATTTATTTCAATT-TATTAATTTATCAAT
7.47b           TTC-GCTATAATATTCGT-AAGAATATTAATATTTCTTTCATTT-TATTAATTTATCAAT
8_Un.1136       TTA--CTATTTTATCAATCGGTGTTATATCATTACGATACGTTCATTTTATTATTTTTCG
9_Un.20         TTATATTTTATCAATCGTTAATATATTCTTCCGTTAGGTTCGTT-TCGTTATTTTTCGCT
10.45           TTA--TTATAAAATTTTC--ATTTTACTATTTTATCAATCGGTT-TTTCAATAGGTTATT
11.42           TTA--TTATTTTATCAATCGGTGTTATATCATTACGATACGTTTGTTTTATTATTTTTCG
12.30           TTC-GCTACAACATTCGT-AAGATTATTTAATTTTTATTTCATTCTATGAATTTATCAAT
13_Un.90        TTA--TTATAAAATTTTC--ATTTTACTATTTTATCAATCGGTT-TTATAGGTTATTCAT
14.25           TTTTACTATTTTATCAATCGATTTTATAGATTATTACGTTACGT---TTATTTTATTATT
15.40           TTA--CTATTTTATCAATCGGTGTTATATCATTACG-TTCATTT----TATTATTTTTCG
16.21           TTA--TTATAAAATTTTC--ATTTTACTATTTTATCAATCGGTT-TTATAGGTTATTCAT
                **    *     *                                          *    

1L_1.1          CGTTATCACGATGCT------TTTTTTTCATTATCA------ATTTATT-A-----GACT
1R_Un.350       CGTTATCACGATGCT------TTTTTTCCATTATCA------ATTTATA-A-----GATT
2.43            CGTTATCACGATGATAAA---TTTTTTTCATTATCA------ATTTATA-A-----GATT
3.39            CATTATCACGACGCTTC----TTTTTTTTGTTCTTACGTTACGTTTATAGATTTTTAATT
4.27            TTTCTTTAAAATTTAACG---GTTTAATTTTTTTTA-------TCGGTA------ATATT
5.33            CGTTATCACGATGATAAA---TTTTTTTCATTATCA------ATTTATAAG------ATT
6.55            CGTTATCACGATGATAAA---TTTTTTTCATTATCA------ATTTATA-A-----GATT
7.47a           TATTATCACGACGTTTCT---TTTTTTTTGTTTTCACGTTACGTTTACAGA-----GATT
7.47b           TATTATCACGACGTTTCT---TTTTTTTTGTTTTCACGTTACGTTTACACA-----GATT
8_Un.1136       TTTCTTTAAAATTTAACG---GTTTAATTTTTTTAAT-----ATCGATAAT------ATT
9_Un.20         TCTT--TAAAATTTAACG---ATTTAATTTTTTTTA-------TCAATA-A-----TATT
10.45           CATTA-CGTTACATT-CA---TTTTATTACTTTTCG-------TTTCTTTA-----AAAT
11.42           TTTCTTTAAAATTTAACG---GTTTAATTTTTTTAAT-----ATCGATAA------TATT
12.30           CATTATCACGACGCTTCTCTTTTTTCTTTATTTTCACGTTACGTTTTTA-------GATT
13_Un.90        TA----CGTTACATT-CA---TTTTATTACTTTTCG-------TTTCTTTA-----AAAT
14.25           TTTCTTTAAAATTTAACG---GTTTAATTTTTTTTA-------TCGGTA-A-----TATT
15.40           TTTCTTTAAAATTTAACG----TTTAATTTTTTTAAT-----ATCAATAAT------ATT
16.21           TA----CGTTACATT-CA---TTTTATTACTTTTCG-------TTTCTTTA-----AAAT
                          *           ***     ** *         *             * *

1L_1.1          TACAAAATA----TCGTTGAATAGT-------CAACGATATTTTT--TCTTTATTTTTTC
1R_Un.350       TACAA-------------AAAGGTT-------CAACGATATTTTT--TCTTT--------
2.43            TACAA-------------AAAGGTT-------CAACGATATTTTT--TCTTCATTTTTTC
3.39            TTTAATTTTAATATTTTTCGTTTTTCGAATAGTTTAATTTTTCTT--TCATTATTAATTT
4.27            TTTGATAA--------TCCGTCCTT-------TTTAATTTTCCTT--TTATTAA------
5.33            TACAA-------------AAAGGTT-------CAACGATATTTTT--TCTTCATTTTTTC
6.55            TACAA-------------AAAGGTT-------CAACGATATTTTT--TCTTCATTTTTTC
7.47a           TTTAATTT--------TAATATTTT-------TCAAATTCTTTTT--TCATTATTAATTT
7.47b           TTTAATTT--------TAATATTTTTCGTTTTTCGAATTTCTTTT--TCATTATTAATTT
8_Un.1136       TTCGATAA--------TCAGTGTTT-------TTTAATTTTCTTT--TTATTA------T
9_Un.20         TTCGATAA--------TTAGTTTTT-------TTTAATTTTCTTT--TCATTA------T
10.45           TTAACGGT--------TTAATTTTT-------TTTAATTTTCCTT--TTATCA------C
11.42           TTCGATAA--------TCAGTGTTT-------TTTAATTTTCTTT--TTATTA------T
12.30           TTTAATTTTAATATTTTTCGTTTTTCCAATAGTTTAATTTTTCTTCTTCATTATTAATTT
13_Un.90        TTAACGGT--------TTAATTTTT-------TTTAATTTTCCTT--TTATCA------C
14.25           TTTGATAA--------TCAATCCTT-------TTTAATTTTCCTT--TTATTA------C
15.40           TTCGATAA--------TTAGTATCT-------TTTAATTTTCTTT--TTATTA------T
16.21           TTAACGGT--------TTAATTTTT-------TTTAATTTTCCTT--TTATCA------C
                *                       *             *    **  *  *         

1L_1.1          TTTTATTTTA-----------------A------------TTTTCCGATCATTTTT-GT-
1R_Un.350       ---TATTTTA-----------------A------------TTTTTTGATCATTTTC-GT-
2.43            TTTTATTTTAA-----------------------------TTTTTTGATCATTTTT-GT-
3.39            ATGATATTTATAAAAAGGTTATTCAACGATAT------TTTTTCTTTATCTTTTCT-TTT
4.27            AATTAATTTATAAGATGCATAAAAAACG------------TTTAATGATTTTTTTTTGTT
5.33            TTTTATTTTAA-----------------------------TTTTTTGATCATTTTT----
6.55            TTTTATTTTA-----------------A------------TTTTTTGATCATTTTT-GT-
7.47a           ATGAAATTTATAAAAAAT-CAAAGAATA------------TTTTTTTTTTATTTTT-ATG
7.47b           ATGAAATTTATAAAAAGATCAAACAATA-------------TTTTTTTTTATTTTT-ATA
8_Un.1136       AATTAAATTATAAGACGCATTAATAAAAACATAAAAAACATTTAATGATTTTTTTT-GTT
9_Un.20         TATTAATTTATAAGATGCATAAAAAACG------------TTTAATGATTTTTTTT-GTT
10.45           AATTAATTTATAAGATGCAGAAAAAACG------------TTTAATGATTTTTTTT-GTT
11.42           AATTAATTTATAAGATGCATAAAAAACG------------TTTAATGATTTTTTTTTGTT
12.30           ATGAGATTTATAAAAAGATCGAACAATATT---------TTTTCTTTGTCTTTTTTTTTT
13_Un.90        AATTAATTTATAAGATGCAGAAAAAACG------------TTTAATGATTTTTTTT-GTT
14.25           AATTAATTTATAAAATGCACAAAAAACG------------TTTAACGATTTTTTTT-GTT
15.40           AATTAATTTATAAGACGCATTAATAAAAACATAAAAAACATTTAATGATTTTTTTT-GTT
16.21           AATTAATTTATAAGATGCAGAAAAAACG------------TTTAATGATTTTTTTT-GTT
                       ***                               **     *  ***      

1L_1.1          ---CGAATTA--------TCCTT--TGAATTAT---ATCGTAATTACGA--GTATCG-TA
1R_Un.350       ---TGAATTA--------TCGTT--CGAATTAT---ATCGTAATTACGA--GTATCG-TA
2.43            ---CGAATTA--------TCGTT--CGAATTAT---ATCGTAATTATGA--ATATCG-TA
3.39            ATTTTAATTTTTTAATCATTTTTGTCGAATTATC--GTTCGAATTATCA--GTATCG-TA
4.27            TACTTTGTTAATT-----TTTTTTATCATTTTTC--GTTGGTATTATTATAACATAA-TA
5.33            -GTCGAATTA--------TCGTT--CGAATTAT---ACCGTAATTATGA--ATATCG-TA
6.55            ---CGAATTA--------TCGTT--CGAATTAT---ATCGTAATTATGA--ATATCG-TA
7.47a           T-TTTAATCA--------TTTTTATTGAATTATC--GTCCGAATTATCA--GTATCG-TA
7.47b           T-TTTAATCA--------TTTTTGTTGAATTATC--GTCCGAATTATCA--ATATCG-TA
8_Un.1136       TACTTTATCAAT------TTTTTAATCATTTCTC--GTTGGTATTATTATAGTATAA-TA
9_Un.20         TATTTTGTTAAT------TGTTCGATCATTTTTC--GTTGGTATTATTATAGTATAA-TA
10.45           TACTTTGTTAAT------TTTTTGATCATTTCTT--ATCGGTATCATTATAATATAA-TA
11.42           TATTTTGTTAAT------TGTTCGATCATTTTTC--GTTGGTATTATTATAGTATAA-TA
12.30           ATTTTAATCTTTCAATCATTCTCGTCGAATCATCGAATCATTATTACCGAATTATCAATA
13_Un.90        TACTTTGTTAAT------TTTTTGATCATTTCTT--ATCGGTATCATTATAATATAA-TA
14.25           TACTTTGTTAAT------TTTTTAATCATTTCTT--ATCGGTATTATTATAATATAA-TA
15.40           TAATTTATTAAT------TTTTTAATCATTTCTC--GTTGGTATTATTACAATATAA-TA
16.21           TACTTTGTTAAT------TTTTTGATCATTTCTT--ATCGGTATCATTATAATATAA-TA
                       *          *  *     * *  *         ** *       **   **

1L_1.1          ----------------AATCT-------ATTTAATC-GTCAAAATTTAGTTACGCTT---
1R_Un.350       ----------------AATCT-------ATTTGATC-GTCAAAATTTAGTTACGCTT---
2.43            ----------------AATCT-------ATTTAATC-GTCAAAATTTAGTTACGCTT---
3.39            ----------------AATCT-------ATTTAATC-GTCAAAATTTAGTTATACTT---
4.27            TAAATATACATAATATAATATAAATATAAAAGAAATAGTTAAAGTATAGATACGCTTTTT
5.33            ----------------AATCT-------ATTTAATC-GTCAAAATTTAGTTACGCTT---
6.55            ----------------AATCT-------ATTTAATC-GTCAAAATTTAGTTACGCTT---
7.47a           ----------------AATCTT----TAATTCAATC-ATCAAAATTTAGTTACGCTT---
7.47b           ----------------AATCTT----TAATTCAATC-ATCAAAATTTAGTTACACTT---
8_Un.1136       T---------------AATATAAATATAATAGAAATAGTTAAAGTATAGATACGCTTTTT
9_Un.20         T---------------AATATAAAAATAATAGAAATAGTTAAAGTATAGATACGCTTTTT
10.45           ----------------TAAATA----TAATAGAAATAGTTAAAGTATAGATACACTTTTT
11.42           T---------------AATATAAATATAATAGATATAGTTAAAGTATAGATACGCTTTTT
12.30           TCGTA-----------AATCTT----TAATTCAATC-GTCAAAATTTAGTTACGCTT---
13_Un.90        TA--------------AATATA------ATAGAAATAGTTAAAGTATAGATACACTTTTT
14.25           ----------------TAAATA----CAATAGAAACAGTTAAAGTATAGATACGCTTCTT
15.40           TA--------------AATATA------ATAGAAATAGTTAAAGTATAGATACGCTTTTT
16.21           TA--------------AATATA------ATAGAAATAGTTAAAGTATAGATACACTTTTT
                                 *  *       *         * *** * *** **  ***   

1L_1.1          ---------TTTTTTTTTC-----ATATCTTTT-------A-TACATTTTCGACGAATTT
1R_Un.350       ----------TTTTTTTTC-----ATATCTTTT-------A-TACATTTTCGACGAATTT
2.43            ----------TTTTTTTTC-----ATATCTTTT--------ATACATTTTCGACGAAGTT
3.39            ---------TTTTCTTTCGTAAAAGTATCTTTTC--------TATATTTTTGACGAATTT
4.27            ATTTTTTCATTTTTTATTGCAAAAGTATTTTTT-------AATACATTTTTGACGAATCT
5.33            ---------TTTTTTTTTTC----ATATCTTTT--------ATACATTTTCGACGAATTT
6.55            ----------TTTTTTTTC-----ATATCTTTT-------A-TACATTTTCGACGAATTT
7.47a           ----------TTTCTTTCGTAAAAATATCTTTT-------A-TACATTTTTGACGAATTT
7.47b           ----------TTTCTTTCGTAAAAATATCTTTT--------ATACATTTTTGACGAATTT
8_Un.1136       A--------TTCTTTTTTGCAAAAGTATCTTTT-------AATACATTTTTGGCAAATTT
9_Un.20         A--------TTTTTTTTTGCAAAAGTATCTTTTGCAAAAAAATACATTTTTGGCAAATTT
10.45           A--------TTTTTTTTTGCAAAAGTATCTTTT-------AATACATTTTTAGCAAATTT
11.42           AT-------TTTTTTTTTGCAAAAATATCTTTTGCAAAAAAATACATTTTTGGCAAATTT
12.30           ----------TTTCTTTCGTAAAAGTATCTTTT--------ATACATTTTTGACGAATTT
13_Un.90        A--------TTTTTTTTTGCAAAAGTATCTTTT-------AATACATTTTTAGCAAATTT
14.25           A--------TTTTTTTTTGCAAAAGTATCGTTT-------AATACATTTTTGGCAAATTT
15.40           A--------TTTTTTTTTGCAAAAGTATCTTTT-------AATACATTTTTGGCAAATTT
16.21           A--------TTTTTTTTTGCAAAAGTATCTTTT-------AATACATTTTTAGCAAATTT
                          * * * *        ***  ***         ** *****   * **  *

1L_1.1          ATCGTTCTTTTTCCCCTCTTATTATTCGCTGCGCTTTA---------ATATATATTTAAT
1R_Un.350       ATCGTTCTTTTTCCCCTCTTATTATTCGCTGCGCTTTA---------ATATATATTTAAT
2.43            ATCGTTCTTTTTCCCCTCTTATTATTCGCTGCGCTTTA---------ATATATATTTAAT
3.39            ATCCTTTTTTTCTTTCTTTTATTATTCGCTGCGTTTTA---------ATAA--TTTTAAT
4.27            ATCGTTGTTTCTCTTTTCTAATTTTTTTCCACGT--------------------CTTAAT
5.33            ATCGTTCTTTTTCCCCTCTTATTATTCGCTGCGCTTTATATATATATATATATATTTAAT
6.55            ATCGTTCTTTTTCCCCTCTTATTATTCGCTGCGCTTTA---------ATATATATTTAAT
7.47a           ATCTTTCTTCCTTCC-TCTTATTATAGAATA-----TT---------ATATACTATTAAT
7.47b           ATCTTTCTTTCTTCC-TCTTATTATAGAATATTA--------------TATACTATTAAT
8_Un.1136       ATCGTTGCTTTTCTCTTCTAATTTTTTTCTACGC--------------------TTTAGC
9_Un.20         ATCATTGTTTTTCTTTTCTAATTTTTTTCTACGT--------------------TCTAAT
10.45           ATCATTGTTTTTCTTTTCTAATTTTTTTCTACGC--------------------TTTAAT
11.42           ATCATTGTTTTTCTTTTCTAATTTTTTTCTACGT--------------------TCTAAT
12.30           ATCTTTCTTCCTTCC-TCTTACTATTCGCTGCGT--------------------TTTAAT
13_Un.90        ATCATTGTTTTTCTTTTCTAATTTTTTTCTACGC--------------------TTTAAT
14.25           ATCGTTGTTTTTCTTTTCTAATTTTTTTCTACGC--------------------TTTAAT
15.40           ATCGTTGCTTTTCCTTTCTAATTTTTTTCTACGC--------------------TTTAGT
16.21           ATCATTGTTTTTCTTTTCTAATTTTTTTCTACGC--------------------TTTAAT
                *** **  *       * * * * *                               **  

1L_1.1          ACAAAATTATAACGATAATAATTAATAA--TTTTAATCGAATTAC-TGTATTTCTTTTCT
1R_Un.350       ACAAAATTATAACGATAATAATTAATAA--TTTTAATCGAATTAC-TGTATTTCTTTTCT
2.43            ACATAATTATAACGATAATAACTAATAA--TTTTAATCGAATTAC-TTTATTTCTTTTCT
3.39            T----ACTATATACTTATATACTTATAA--TTACTATATGCTTATGTACTTCTTCTTTTT
4.27            A----GTTCTAACGAT---AATTAATAA-------TTTTAATTAT-TATATCTTTTCCCT
5.33            ACATAATTATAACGATAATAATTAATAA--TTTTAATCGAATTAC-TATATTTCTTTTCT
6.55            ACATAATTATAACGATAATAACTAATAA--TTTTAATCGAATTAC-TTTATTTCTTTTCT
7.47a           ATACTATTATACTATTATAAACTATTAAAGTTGCGCTTTAATAGT-TTTAACGATAATAA
7.47b           ATACTATTATACTATTATAAACTATTAAAGTTGCCCTTTAATAGT-TTTAACGATAATAA
8_Un.1136       A----GTTCTAACGAT---AATTAATAA-------ATTTAATTAC-GATATCTTTTCTCT
9_Un.20         A----GTTCTAAGAAT---AATTAATAA-------TTTTAATCAC-TATATCTTTTCCCT
10.45           A----GTTCTAACGAT---AATGAATAA-------TTTTAATTAC-TATAACTTTTCTCT
11.42           A----GTTCTAACGAT---AATGAATAA-------TTTTAATTAC-TATATCTTTTCCCT
12.30           A----GTTTTAACAAT---AATAAATAATTTTAATTCTAAACTAC-AATTCTTATTTTTT
13_Un.90        A----GTTCTAACGAT---AATGAATAA-------TTTTAATTAC-TATAACTTTTCTCT
14.25           A----GTTCTAACGAT---AATTAATAA-------TTTTAATTAC-TATATCTTTTCCCT
15.40           A----GTTCTAACGAT---AATTAATAA-------ATTTAATTAC-CATATCTTTTCTCT
16.21           A----GTTCTAACGAT---AATGAATAA-------TTTTAATTAC-TATATCTTTTCTCT
                       * **    *    *    ***                                

1L_1.1          -CGATCTTTTCGTTCGTATTTATG-ATTTTTGTTTTAATTTTCG---------GTACAAT
1R_Un.350       -CGATCTTTTCGTTCGTATTTATG-ATTTTTGTTTTAATTTTCG---------GTACAAT
2.43            -CGATCTTTTCGTTCGTATTTATG-ATTTTT-----AATTTTCGG--------TAATAAT
3.39            TCGATATTTTCGATATTTCGTTCGTATTTTTGATTTTTGTTTCATCG------GTACAAT
4.27            -CGATGTTTTCATTCGTATTTATG-ATTTTTGTTTTAATTTTCG---------ATATAAT
5.33            -CGATCTTTTCGTTCGTATTTATG-ATTTTTGTTTTAATTTTCGG--------TATTAAT
6.55            -CGATCTTTTCGTTCGTATTTATG-ATTTTTA----ATTTTCGG---------TAATAAT
7.47a           ATAATTTTAATTACTATAATTCTT-TTTTTTTCGATAATTTCGT---------TCATATT
7.47b           ATAATTTTAATTACTATAATTCTTTTTTTTTTCGATAATTTCGT---------TCATATT
8_Un.1136       -CGATCTTTTCGTTCGTATTTATG-ATTTTTGTTTTAATTTTCGGTAATTTCGTTTTAAT
9_Un.20         -CGATCTTTTCATTCGTATTTATG-ATTTTTGTAAAAATTTTCACGAA-----TGACAAT
10.45           -CGATTTTTTC----GTATTTACG-ATTTTTGTTTTAATTTTCGGTAATTTTGTTTTAAT
11.42           -CGATCTTTTCATTCGTATTTATG-ATTTTTGTTTTAATTTTCGGTAATTTTGTTTTAAT
12.30           -CGATAATTTCGTTCATATTTTGG-ACGTTTGTT----TTATCG---------GTACAAT
13_Un.90        -CGATTTTTTC----GTATTTACG-ATTTTTGTTTTAATTTTCGGTAATTTTGTTTTAAT
14.25           -CGATCTTTTCGTTGGTATTTATG-ATTTTTATTTTAAGTTTCACGAT-----TGACAAT
15.40           -CGATCTTTTCGTTCGTATTTATG-ATTTTTGTTTTAATTTTCG-----------GTAAT
16.21           -CGATTTTTTC----GTATTTACG-ATTTTTGTTTTAATTTTCGGTAATTTTGTTTTAAT
                   **  *        *   *       ***        *                 * *

1L_1.1          TTTGAACGATTGCTTTTTCT------TTTGGAACAGAGGAATTTTTACCGGA-------A
1R_Un.350       TTTGAACGATTGCTTTTTCT------TTTGGAACAGAGGAATTTTTACCGGA-------A
2.43            TTTGAACGATTGTTTTTTCT------TTTCGAATAGAGGAATTTTTACCGAA-------A
3.39            TTCGAATGATTTTTTCCTTTT----TTTCTTAATAGAAAAATTTTTATTGGAA----ATA
4.27            TTTAAATGATTTTTTCTTTT---------TTAATAGAGGAATTTTCACTGGA-------A
5.33            TTTGAACGATTGTTTTTTCT------TTTCGAATAGAGGAATTTTTATCGGA-------A
6.55            TTTGAACGATTGTTTTTTCT------TTTCGAATAGAGGAATTTTTACCGAA-------A
7.47a           TTTGATCT-TTGTTTTATCGGTACAATTTCGAATAGAAAAATTTTTATGGTATT---GGA
7.47b           TTTGATCT-TTGTTTTATCGGTACAATTTCGAATAGAAAAGTTTTTACGGCATT---GGA
8_Un.1136       TTCGAACGATCGTTTTTTCT------TTTGGAACAGAGGAATTTTTACCGGA-------A
9_Un.20         TTTGCGCGATTTTTTTTTTC-----TTTTTCAATAGAGGAATTTTTACTGGA-------A
10.45           TTTGAACGGTTGTTTCTTCT------TTCGGAATAGAGGAATTTTTACCGGA-------A
11.42           TTTGAACGGTTGTTTTTTCT------TTTTCAATAGAGGAATTTTTACCGGA-------A
12.30           TTCGAA-GAAAATTTTTACG------------ATATTGGAACACATACGAAAT------A
13_Un.90        TTTGAACGGTTGTTTCTTCT------TTCGGAATAGAGGAATTTTTACCGGA-------A
14.25           TTTGCGCGATTTTTTTTTCT------TTTTTAATAGAGGAATTTTTACTGGA-------A
15.40           TTTGAACGATTGTTTTTTCT------TTTGGAATAGAGGAATTTTTAGTGGAAATTTTTA
16.21           TTTGAACGGTTGTTTCTTCT------TTCGGAATAGAGGAATTTTTACCGGA-------A
                **           **                 * *    *      *    *       *

1L_1.1          CACGGA-CGAAGTAAAAAAAAAAAAAA--------AATGCGAAAGTTAAATTTCTTAGAA
1R_Un.350       CACGGA-CGAAGTAAAAAAAAAAAAA--------TGCGATGACAGTTAAATTTCTTAGAA
2.43            CACGGA-CGAAGTAAAAAGAAAAAAAA------ATGCGATGGAAGTTAAATTTCTTACAA
3.39            TACGAAATAAAAGAAAAAAAAAAAAAATAAAAAATAGAATGAAAATTAAATTTCTCAGAA
4.27            CATGGA-TGAAGTAAAAGAAAAAAAAGAGAAAAATACGATGAAAGTTAAATTTTTTAGAA
5.33            CACGGA-CGAAGTAAAAAGAAAAAAAA-----AATGCGATGGAAGTTAAATTTCTTACAA
6.55            CACGGA-TGAAGTAAAAAGAAAAAAAA------ATGCGATGGAAGTTAAATTTCTTACAA
7.47a           AACGTA-CGAAAAAAAAAAAAAAAAAATAGAAAATAAGATGAAAATTAAATTTCTCAAAA
7.47b           AACGTA-CGAAAAAAAAAAAAAAATAG---AAAATAAGATGAAAATTAAATTTCTCAAAA
8_Un.1136       CATGGA-CGAAGTAAAAAGAAAAAAAA--AAGAATACGATGGAAGTTAAATTTCTTAAAA
9_Un.20         CATAGA-CGAAGGAAAAAAAAAAGAAA-----ACTAGGATGAAAGTTAAATTTCTTAAAA
10.45           CACGGA-CGAAGTAAAAAGAAAAAAAA-----AATGCGATGAAAGTTAAATTTTTTAGAA
11.42           CATAGA-CGAAGTAAAAAAAAAAAAAA-----ACTAGGATGAAAGTTAAATTTTTTAGAA
12.30           AAAGAA--AAAAAAAAAAAAAATAGAA-----AATAGCATAAAAATTAAATTTCTCGGAA
13_Un.90        CACGGA-CGAAGTAAAAAGAAAAAAAA-----AATGCGATGAAAGTTAAATTTTTTAGAA
14.25           CATAGA-CGAAGGAAAAGAAAAAGAAA-----ACTAGGATGAAAGTTAAATTTCTTAAAA
15.40           CATGGA-CGAAGTAAAAAGAAAAAAAA------ATGCGATGGAAGTTAAATTTCTTAGAA
16.21           CACGGA-CGAAGTAAAAAGAAAAAAAA-----AATGCGATGAAAGTTAAATTTTTTAGAA
                 *   *   **  ****  ***   *                 * ******** *   **

1L_1.1          GAGACACCGAAAAATAGAATTAAAATATAGAATTAAAAAATAGAAAAATAGATAGAATTG
1R_Un.350       GAGACACCGAAAAATAGA----------------------------------TAGAATTG
2.43            GAGACACCGAAAAATAGA----------------------------------TAGAATTG
3.39            GAGACATCGAAAAATAGA----------------------------------TGGAATTC
4.27            GAGACATCAAAAAATAGA----------------------------------TAGAATTC
5.33            GAAACACCGAAAAATAGA----------------------------------TAGAATTG
6.55            GAGACACCGAAAAATAGA----------------------------------TAGAATTG
7.47a           GAAACATCGAAAAATAGA----------------------------------TGGAATTC
7.47b           GAAACATCGAAAAATAGA----------------------------------TGGAATTC
8_Un.1136       GAGACAATGAAAAATAGA----------------------------------TCGAATCG
9_Un.20         GAGACACCGTAAAATAGA----------------------------------TAGAATTC
10.45           GAGACACTGAAAAATAGA----------------------------------TAGAATTG
11.42           GAGACACTGAAAAATAGA----------------------------------TAGAATTG
12.30           GAGACA-TGAAAAATAGA--------------------------------------ATTC
13_Un.90        GAGACACTGAAAAATAGA----------------------------------TAGAATTG
14.25           GAGACACCGCAAAATAG--------------------------------------AATTC
15.40           GAGATACCGTAAAATAAA----------------------------------TAGAATTC
16.21           GAGACACTGAAAAATAGA----------------------------------TAGAATTG
                ** * *    ******                                        **  

1L_1.1          GAAATTCAAAGGAAGTTACGGATGGATAAATCGTCAGATCGAACATCGCCAAACGACGCA
1R_Un.350       GAAATTCAAAGGAAGTTACGGATGGATAAATCGTCAGATCGAACATCGCCAAACGACGCA
2.43            GAAATTGGAAAGAAGTTACGGATGGATAAGTCGTCAGGTCGAACATCGACAAACGAAGCA
3.39            GAAATCCGAATGAAA----CAACGAACAGGTC------------ACTGACGAACGACGCA
4.27            GAAATTCGAAGGAAGCAAGGGATAGATAGGTTGTCAGGACGAACGCTGACAAACGACGCA
5.33            GAAATTGGAAAGAAGTTACGGATGGATAAGTCATCAGGTCGAACATCGACAAACGAAGCA
6.55            GAAATTGGAAAGAAGTTACGGATGGATAAGTCGTCAGGTCGAACATCGACAAACGAAGCA
7.47a           GAAATC------------CAAGCGAACACGTC------------ACTGACAAACAACGCA
7.47b           GAAATCCAAATGAAAC----AGCGAACAAGTC------------ACTGACAAACAACGCA
8_Un.1136       GAAATTCGAAGAAAGTTACGGATGGATAAGTCGTCAGATCGAACATCGACAAACAACGCA
9_Un.20         GAAATTCGAA---------GGATGGATAGATCGTCAGGACAAACGTCGACAAACGACGCA
10.45           GAAATTCGAAGGAAGTTACGGATGGATAAGTCGTCAGATCGAACATTGCCAAACGACGCA
11.42           GAAATTCGAAGGAAGTTACGGATGGATAAGTCGTCAGGACAAACATTGCCAAACGACGCA
12.30           GAAATCCGAATGAA------AGAGCGAAGATC------------ACTAACAAACCACGCA
13_Un.90        GAAATTCGAAGGAAGTTACGGATGGATAAGTCGTCAGATCGAACATTGCCAAACGACGCA
14.25           GAAATTCGAA---------GGATGGATAGATCGTCAGGACGAACGTCGACAAACGACGCA
15.40           AAAATTCGAA---------GGATGGATAGATCGTCAGGACGAACGTCGACAAACGACGCA
16.21           GAAATTCGAAGGAAGTTACGGATGGATAAGTCGTCAGATCGAACATTGCCAAACGACGCA
                 ****                      *  *                  * *** * ***

1L_1.1          TCAACG-----ATAGACGATTTCGATTCTTATAGTACGG-----AGTTTAATTCTTTTTT
1R_Un.350       TCAACG-----ATAGACGGTT-CGATTCTTATAATACGG-----AGTTTAATTCTTTTTT
2.43            TCAATG-----ATTCACAGTT-CCATTCTTATAGTACGG-----AGTTTAATTTCTTTTT
3.39            TCAT--------TTCTCGGTT-CCATTCATATAATACAG-----AGTTTTATT----TTT
4.27            TCAATG-----ATCGTCGGTT-CGATTCTTATAGTACGGG----AGTTTAATTCTTTTTT
5.33            TCAACG-----ATTCACAGTT-CGATTCTTATAGTACGG-----AGTTTAATTACTTTTT
6.55            TCAACG-----ATTCACAGTT-CCATTCTTATAGTACGG-----AGTTTAATT-TCTTTT
7.47a           TCAA--------TTCTCGGTT-CCATTTATATAATACGG-----AGTTTTATT-TTTTTT
7.47b           TCAA--------TTCTCGGTT-CCATTCATATAATACGG-----AGTTTTATT--TTTTT
8_Un.1136       TCAATG-----ATGGACGGTT-CGATTCTTATAGTACGGATTATAGTTTAATTTTTTTTT
9_Un.20         TCAATG-----ATCGTCGGTT-TGAAGGATATAGTACGG-----AGTTTAATTTTTGTTT
10.45           TCAATG-----ATAGACAGTT-CGATTCTTATAATACGG-----AGTTTAATTTTTTTTT
11.42           TCAATG-----ATCGTCGGTT-CGATTCTTATAGTACGG-----AGTTTAATTTTTGTTT
12.30           TCAA--------TTCTCGGTT-CCATTCTTATAGTACGG----------AGTTTTTTTTT
13_Un.90        TCAATGCGTCGATAGACGGTT-CGATTCTTATAATACGG-----AGTTTAATTTTTTTTT
14.25           TCAATG-----ATCGTCGGTT-CGATTCTTATAGTACGG-----AGTTTAATTTTTGTTT
15.40           TCAATG-----ATCATCGGTT-CGATTCTTATAGTATACGG---AGTTTAATTTTTGTTT
16.21           TCAATG-----ATAGACAGTT-CGATTCTTATAATACGG-----AGTTTAATTTTTTTTT
                ***         *   *  **   *    **** **               **    ***

1L_1.1          TGGAATAAAAACGTTTTTTCCA----GCGACG------------AAACGACGGAATACGA
1R_Un.350       TG-AATAAAAACGTTTTTTCCA----GCGACG------------AAACGACGAAATACGA
2.43            TA--ATAAAAACGTTTCTTCCA----GCGATC------------AGACGATGGAATACGA
3.39            TCAAATAAAAATTTTTTTTTCG----ACAATTTT----------TTGGGACAGAAAACGA
4.27            TA--ATAAAAACGGTTTTTCTA----GCGATC------------AAACGACGGAATACGA
5.33            TA--ATAAAAACGTTTCTTCCA----GCGATC------------AGACGATGGAATACGA
6.55            TT-AATAAAAACGTTTCTTCCA----GCGATC------------AGACGATGGAATACGA
7.47a           AA-ATAAAAATTTTTTTTTTCG----ACGATTTTTC-------GGAACAATAGAAAACGA
7.47b           TA-AATAAAAATTTTTTTTTTC---GACGATTTTTC-------GGAACAATAGAAAACGA
8_Un.1136       TT-AATAAAAACGTTTCTTCCA----GCGATG------------AAACGATGGAATACGA
9_Un.20         TA--ATAAAAACGTTTTTTCTA----GCGATG------------AAACGACGGAATACGA
10.45           TT-AATAAAAACGTTTCTTCCA----GCGATG------------AAACGACGAAATACGA
11.42           TA--ATAAAAACGTTTTTTCTA----GCGATG------------AAACGACGGAATACGA
12.30           TTAAATAAATGTTTTTTTTTCGACTAACTAATTTTCTT----TCGAACAACAGAAAACGA
13_Un.90        TT-AATAAAAACGTTTCTTTCA----GTGATG------------AAACGACGGAATACGA
14.25           TA-ATAAAAAACGTTGTTTTAATAAAACGTTTTTTCTAGCGATGAAACGACGGAATACGA
15.40           TA--ATAAAAACGTTTTTTCTA----GCGACG------------AAACGACGGAATACGA
16.21           TT-AATAAAAACGTTTCTTCCA----GCGATG------------AAACGACGAAATACGA
                      ***     *  **                              *   ** ****

1L_1.1          TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAC---TCGCGA
1R_Un.350       TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAA---TCGCGA
2.43            TTAG--------------GAAAGACGAAAGAAAATAAAAATTAAAAAAAAAT--TCGCGA
3.39            TCCC--------------GAAGGATGAAAGAAAATCAAAATTGAAAAAAAAT--TCGCGA
4.27            TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAAA-CTCGCGA
5.33            TTAG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAAT--TCGCGA
6.55            TTAG--------------GAAAGACGAAAGAAAATAAAAATTAAAAAAAAAT--TCGCGA
7.47a           TCCG--------------GAAGGATGAAAGAAAATCGAAATTAAAAAAAAAG--TCTCGA
7.47b           TCCG--------------GAAGGATGAAAGAAAATCGAAATTAAAAAAAG----TCTCGA
8_Un.1136       TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAGAAAAAATTCGCGA
9_Un.20         TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAAAATTCGCGA
10.45           TTCGATATATTCGGATACGAAAGATAAAAGAAAATAAAAATAAAAGAAAAAA-TTCGCGA
11.42           TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAAAATTCGCGA
12.30           TCCG--------------GAAGGATGAAAGAAAATCGAAATTGAAAACAAAA-CTCGCAA
13_Un.90        TTCGATATATTCGGATACGAAAGATAAAAGAAAATAAAAATAAAAAAAAAAAACTCGCGA
14.25           TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAAAATTCGCGA
15.40           TTCG--------------GAAAGACAAAAGAAAATAAAAATTAAAAAAAAAA--TCGCGA
16.21           TTCGATATATTCGGATACGAAAGATAAAAGAAAATAAAAATAAAAGAAAAAA-CTCGCGA
                *                 *** **  *********  ****  **   *     ** * *

1L_1.1          AAAGCGTTCTCGAGTACCTTAAATAGCCATAAATTAGAATTTTTCGCCAGAGGGGCTGTG
1R_Un.350       AAAGGGTTCTCGAGTACCTTAAATAGTCAAAAATTAAAATTTTTGGCCCGAGGGGCTGTG
2.43            AAAGCATTATCGAGAACCTTAAATAACCAAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
3.39            AAAGTATTCTCGA---CCTTAAATAGCGAAAAATTAAAATTTTTCGTCAGAGGGGCTGTG
4.27            AGAGCGTTCTCGAGTACCTTAAATAGCCAAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
5.33            AAAGCATTCTCGAGAACCATAAATAACCAAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
6.55            AAAGCATTATCGAGAACCTTAAATAACCAAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
7.47a           AAAGTATTCTCGA---CCTTAAATAGTCAAAAATTAAAATTTTTCGTTAGAGGGGCTGTG
7.47b           AAAGTATTCTCGA---TCTTAAATAGCCAAAAATTAAAATTTTTCGTCAGAGGGGCTGTG
8_Un.1136       AAAGCGTTCTCGAGAACCTTAAATAGCCGAAAATTAAAAATTTTCGCCAGAGGGGCTGTG
9_Un.20         AAAGCGTTCTCGAGTACCTTAAATAGCTAAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
10.45           AAAGCGTTCTCGAGAACCTTAAATAGCCGAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
11.42           AAAGCGTTCTCGAGTACCTTAAATAGCCAAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
12.30           AAAGTATTCTCGAGTACCTTAAATAGCCGAAAATTAAAACTTTTCGTCAGAGAGGCGGTG
13_Un.90        AAACTATTCTCGAGTACCTTAAATAACCGAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
14.25           AAAGCGTTCTCGAGTATCTTAAATAGCCAAAAATTAAAATTTTTCGCCAGAGGGGCTGTG
15.40           A-AGCGT-CTCGAGTACCTTAA-TAAC-GAAAATTAAA--TTTTCGCCAGAGGGGCTGTG
16.21           AAACTATTCTCGAGTACCTTAAATAACCGAAAATTAAA--TTTTCGCCAGAGGG-CTGTG
                * *   *  ****    * *** **     ****** *  **** *   *** * * ***

1L_1.1          GATAAGTCGGAACGCTG-TTCTTCCGCACGCCAAAGAACTCG-AGTTCGAGAC-TCGCTT
1R_Un.350       GTTAAATTCGAAACGTTCTTTTTCCGCACGCGAAAGAA-TCG-GGTTCAAAAC-TCG-TT
2.43            GCTAAGTTGGAACGCTGCTTCTTCCGCACGCCGAAGAACTCG-AGTTCGAGACCTCGCTT
3.39            GCTAAGTCGGAACGCTGCTTCTTCCGCACGCCGAAGAACTCG-GGTTCGAGAC-TCGCTT
4.27            GCTAAGTTGGAACGCTGCTTCTTCCGCACGCGGAAAGACTCG-GGTTCGAGAC-TCG-CT
5.33            GCTAAGTCGGAACGCTGCTTCTTCCGCACGCCGAAGAACTCG-AGTTCGAGAC-TCGCTT
6.55            GCTAAGTCGGAACGCTGCTTCTTCCGCACGCCGAAGAACTCG-AGTTCGAGACCTCGCTT
7.47a           GCTAAGTCGGAACGCTGCTTCTTCCGCACGCGGAAAGACTCG-GGTTCGAGAC-TCGCTT
7.47b           GCTAAGTTGGAACGCTGCTTCTTCCGCACGCGGAAAGACTCG-GGTTCGAGAC-TCG-CT
8_Un.1136       GCCAAGTCGGAACGCTGCTTCTTCCGCACGCGGAAAGACTCG-GGTTCGAGAC-TCG-TT
9_Un.20         GCTAAGTGGGAACGCTGCTTCTTCCGCACGCGGAAAGACTCG-GGTTCGAGAACTCG-CT
10.45           GCTAAGTCGGAACGCTGCTTCTTCCGCACGCGGAAAGACTCG-GGTTCGAGAC-TCG-TT
11.42           GCTAAGTTGGAACGCTGCTTCTTCCGCACGCGGAAAGACTCG-GGTTCGAGAACTCG-CT
12.30           GCTAAGTTAGAACGCTGCTTCTTCCGCACGCGGAAGAACTCG--GTTCGAGAC-TCGCTT
13_Un.90        GCTAAGTCGGAACGCTGCTTCTTCCGCACGCGGAAG-ACTCG-GGTTCGAGAC-TCGCTT
14.25           GCTAAGTCGGAACGCTGTTTCTTCCGCACGCGGAAAGACTCG--GTTCGAGAC-TCG-CT
15.40           GCTAAGT-GGAACGCTGCT--CTCCGCACGCGGAAAGACTCTCGGGTCGAGAC-TCGCTT
16.21           GCTAAGTCGGA-CGCTGCTTCTTCCGCACGCGGAAG-ACTCG-GGTTCGAGAC-TCGCTT
                *  ** *  **    *  *   *********  **  * **   * ** * *  ***  *

1L_1.1          T---CGCGACT-CGAGTATTTTTCGCGAGCGACGGACAAGTTATCAACTGGTCACGAGGG
1R_Un.350       T---CTTGACT-CGAGTTTTTT-CGCGAGCGACGGACACTTTCCGAA-TTGCCCCGAGG-
2.43            T---CGCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
3.39            T---CGCGATT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
4.27            T---CTCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCCGAACTTGCCACGAGGG
5.33            T---CGCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
6.55            T---CGCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
7.47a           T---CTCGACTTCGAGTTTTTTTCGCGAGCGACGGACAACTTCTAAACTTGCCACGAGGG
7.47b           T---CTCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCTAAACTTGCCACGAGGG
8_Un.1136       T---CTCGACT-CGCGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
9_Un.20         T---CTCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCCGAACTTGCCACGAGGG
10.45           T---CTCGACT-CGCGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
11.42           T---CTCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCCGAACTTGCCACGAGGG
12.30           TTCTCTCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
13_Un.90        T---CTCGACTTCGAGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
14.25           T---CTCGACT-CGAGTTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
15.40           C----TCGACTCTCGAGTTTTTTCGCGAGCGACGGACAACTTCTCAACTTGCCACGAGGG
16.21           T---CTCGACTTCGAGTTTTT--CGCGAGCGACG-ACA-CTTCTCAACTG--CACGAGG-
                       ** *       ***  *********** ***  **   ** *   * ***** 

1L_1.1          AATGACCCTCGGTGTCTTTCTCGCGATACGGACTTGGGAAG----TCCCTCTCAGGTCT-
1R_Un.350       AATGACCCTCG-TGTTCTTCTCCCGATACGGACTTGG-AAG----TCCCTCTCAGGTCT-
2.43            AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAA----TCCCTCTCAGGTCT-
3.39            AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCCTCTCAGGTCT-
4.27            AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCCTCTCAGGTCT-
5.33            AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCCTCTCAGGTCT-
6.55            AATGACCCTCGGTGTCTTTCTCCCGTTACGGACTTGGGAAA----TCCCTCTCAGGTCT-
7.47a           AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCCTCTCAGGTGT-
7.47b           AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCCTCTCAGGTCTT
8_Un.1136       AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCCTCTCAGGTCT-
9_Un.20         AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCACTCTCCGGTCT-
10.45           AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAA----TCCCTCTCAGGTCTT
11.42           AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCACTCTCCGGTCT-
12.30           AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCTTCTCAGGTCT-
13_Un.90        AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCACTCTCCGGTCT-
14.25           AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCACTCTCCGGTCT-
15.40           AATGACCCTCGGTGTCTTTCTCCCGCTACGGACTTGGGAAG----TCCCTCTCAGGTCT-
16.21           AATGACCCTCGGTGTCTTC--TCCGCTACGGACTTGGGAAG----TC-CTCTCAGGTCT-
                *********** ***  *     ** *********** **     **  **** *** * 

1L_1.1          -AGGGGGTGTGTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
1R_Un.350       -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGTCCGG
2.43            -AGGGGGTTTTTCACCCAGGAGACGACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
3.39            -AGGGGGTTTTTCATCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
4.27            -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCTCGGGCCGG
5.33            -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
6.55            -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
7.47a           -AGGAAATTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCTGGGCCGG
7.47b           -AGGGGGTTTTTCATCCAGGAGACCACTCTCTCCGGCCCGGGGGGTGTCCCCCGGGCCGG
8_Un.1136       -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
9_Un.20         -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCAGG
10.45           -AGGGGGTTTTTCACCCAGGAGACCGCTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
11.42           -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCAGG
12.30           -AGGGGGTTTTTCACCCAGGAGACCACTCTC-CCGGTCCGGGGGGTGTCCCCCGGGCCGG
13_Un.90        -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGTTGTCCCCCGGGCCGG
14.25           -AGGGGGTTTTTCACCCAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
15.40           -AGGGGGTTTTTCACCTAGGAGACCACTCTCTCCGGTCCGGGGGGTGTCCCCCGGGCCGG
16.21           ---AGGGGTTTTCACC---AGGAACACTCTCTCCGGTCCGGGGG-TGTCCCCCGGGCCGG
                         * *** *     **   ***** **** ******* ******  ** * **

1L_1.1          ACTCGAATTTTGCAGGAGGCACAGGCGGAGGTTAGACGGGGAGGGTTATATCATTGTGG-
1R_Un.350       ACACGAATTTTGCAGGAGGCACCGGCGGAGGTTAGACGGGGAGGGCTATATCATCGGGG-
2.43            ACTCGAATTTTGCAGGAGGCATCGGCGGAGGTTAGG-GGGGAGGGCTATATCATCGGGGA
3.39            ACTCGAATTTTGGAGGAGGCACAGGCGGAGGTTAGACGGGGAGGGCTATATCATCGGAG-
4.27            ACTCGAATTTTGCAGGAGGCACCGACGGAGATTAGACGGGGAGGGCTATATCATCGGGG-
5.33            ATTCGAATTTTGCAGAAGGCACCGGCGGAGGTTACACGGGGAGGGCTATATCATCGGGGA
6.55            ACTCGAATTTTGCAGGAGGCATCGGCGGAGGTTACACGGGGAGGGCTATATCATCGGGGA
7.47a           ACTCGAATTTTGCAGGAGGCACCGGCGGAGGTTAGACGGGGAGGGTTATATCATCAGGAA
7.47b           ACTCGAATTTTGCAAGAGGCACCGGCGGAGGTTAGACGGGGAGGGCTATATGATCGAGGA
8_Un.1136       ACTCGAATTTTGCAGGAGACACCGGCGGAGGTTAGACGAGGAGGACTACATCATCGGGG-
9_Un.20         ACTCGAATTTTGCAGGAGGCACAGGCGGAGGTTAGACGGGGAGGGTTATATCATTGTGG-
10.45           ACTCGAATTTTGCAGGAGGCAGCGGCGGAGGTTAGACGGGGAGGGCTATATCATCGGGGA
11.42           ACTCGAATTTTGCAGGAGGCACAGGCGGAGGTTAGACGGGGAGGGTTATATCATTGTGG-
12.30           ACTCGAATTTTGCAGGAGGCACCGGCGGAAGTTAAACGGGGAGGGCTATTTCATCGGGG-
13_Un.90        ACTCGAATTTTGCAGGAGGCACCGGCGGAGATTAGACGGGGAGGACTACATCATCGGGG-
14.25           ACTCGAATTTTGCAGGAGGCACCGGCGGAGATTAGACGGGGAGGACTACATCATCGGGG-
15.40           ACACGAATTTTGCAGGAGGCACTAGCGGAGGTTAGACGGGGAGGGCTATATCATCGGGG-
16.21           ACTCGAATTTTGCAGGAGACATCGGCGGAAGTTAAACGGGGAGGGCTATATCATCGGGG-
                *  ********* *  ** **    ****  ***   * *****  **  * **      

1L_1.1          TCACTCTTACCGGCTTTTGCTCTCGGGAAGCGGGAGCGGGAT-CGTTGGTACTCTCGAAG
1R_Un.350       TCACTCTTACCGGCTTTTGCTCCCGGGAAGCGGGAGCGGGTTTCGTGGCTACTCCCGAAG
2.43            TCCCTCATATCGGCTTTTGCTCCCGGGAAGCAGGAGCGGGAT-CGTGGCTACTCTCGAAG
3.39            TCACTCGTAACAGCTTTTGCTCCCGGGAAGCGGGAGCGGGAT-CGTGGCTACTCTCGAAG
4.27            TCACTCGTACCGGCTTTTGCTCCCGGGAAGCGGGAGCGGACTTCGCGGCTACTCTCGAAG
5.33            TCCCTCATAACGGCTTTTGCTCCCGGGAAGCAGGAGCGGGAT-CGTGGCTACTCTCGAAG
6.55            TCCCTCATATCGGCTTTTGCTCCCGGGAAGCAGGAGCGGGAT-CGTGGCTACTCTCGAAG
7.47a           TCGCTCCTACCGGCTTTTGCTCCCGGGAAGCGGGAGCTGACTTCGCGGCTACTC--GAAG
7.47b           TCACTCATACCGGCTTTTGCTCCCGGGAAGCAGAAGCGGGAT-CGTGGCTACTCTCGAAG
8_Un.1136       TCACTCGCACCGGCTTTTGCTCCCGGAAAGCGGGAGCTGACTTCCCGGCTACTC--GAAG
9_Un.20         TCACTCTTACCGGCTTTTGCTCTCGGGAAGCGGGAGCGAGAT-CGTTGGTACTCTCGAAG
10.45           TCACTCATACCGGCTTTTGCTCCCGGGAAGCGGGAGCGGGAT-CGTGGCTACTCTCGAAG
11.42           TCACTCTTACCGGCTTTTGCTCTCGGGAAGCGGGAGCGAGAT-CGTTGGTACTCTCGAAG
12.30           CCACTCGCACTGGCTTTTGCTCCCGGGAAGCGAGAGCTGACTTCGCGGCTACTCTCGAAG
13_Un.90        TCACTCGCACCGGCTTTTGCTCCCGGGAAGCGGGAGCTGACTTCGCGGCTACTC--GAAG
14.25           TCACTCGCACCGGCTTTTGCTCCCGGGAAGCGGGAGCTGACTTCGCGGCTACTC--GAAG
15.40           TCACTTGCACCGGCTTTTGCTCCCGCGAAGCGGGAGTGGACTTCGCGGCTACTCTCGAAG
16.21           TTACTCGCACCGGCTTTTGCTCCCGGGAAGCGGGAGCTGACTTCGCGGCTACTCTCGAAG
                   **   *   ********** **  ****   **     * *   * *****  ****

1L_1.1          CGAGATTATCAGTTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
1R_Un.350       CGAGATTATCAACTTAATGGCGCGGAAAAGTATCGGATGTCCAGCGGTAATACGAGAAAA
2.43            CGAGATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
3.39            CGAGATTATCAGTTTAATGGCGCGGAAAA-TATCGGATATCTAGCGGTAATACGAGAAAA
4.27            TGAGATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAA-
5.33            CGAGATTATCAGCTTAATGGCGCGGAAAAATATCGGATGTCCAGCGGTAATGCGAGAAAA
6.55            CGAGATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
7.47a           CGAGATTATCAACTTAATGGCGCGGAAAAGTATCGGGTGTCCAGCGGTAATACGAGAAAA
7.47b           CGAGATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
8_Un.1136       CGAGATTATCAGTTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
9_Un.20         CGAGATTATCAGTTTAATGGCGCGGAAAAGTATCGGATGTCCAGCGGTAATACGAGAAAA
10.45           CGAGATTATCAGCTTAATGGCGCGGAAAAATATCGGATGTCTAGCGGTAATACGAGAAAA
11.42           CGAGATTATCAGTTTAATGGCGCGGAAAAGTATCGGATGTCCAGCGGTAATACGAGAAAA
12.30           CGAGATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
13_Un.90        CGAGATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
14.25           CGAGATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
15.40           CAAGATTATCGGCTTAATGGCGCGGAAAAATATCGGATGTCTAGCGGTAATACGAGAAAA
16.21           CGAAATTATCAGCTTAATGGCGCGGAAAAGTATCGGATGTCTAGCGGTAATACGAGAAAA
                  * ******   **************** ****** * ** ********* ******* 

1L_1.1          CTGTCGGCAGAAA--GCAAAAATTAAAGAAGCGCAAA-------GAAGAAAAGAGAAAAG
1R_Un.350       CTGTCGGCACGTA--TTAGAAATTAAAGAAGCGGAAAATAGAAAGAAGAAAAGAGAAAAG
2.43            CTGTCGGCAGAAG--GCAAAAATTAAAGAAGCGCAAA-------GAAGAAAAGAGAAAAG
3.39            CTGTCGGTACGCA--GAAATTAAAGAAGAAGCGGAAAATAGAAAGAAGAAAAGAGAAAAG
4.27            CTGTCGGCAC-----GCAGAAATTAAAGA-GCGAAAAT----AGAAAGAGAAAGAGAAAC
5.33            CTGTCGGCACGCA--GAAATTAAAGAAGAAGCGAAAAATAGAAAGAAGATAAGAGAAAAG
6.55            CTGTCGGCAGAAA--GCAAAAATTAAAGAAGCGCAAA-------GAAGAAAAGAGAAAAG
7.47a           CTGTCGGCACGTA--TTAGAAATTAAAGAAGCGGAAAATAGAAAGAAGAAAAGAGAAAAG
7.47b           CTGTCGGCAGAAA--GCAAAAATTAAAGAAGCGCAAA-------GAAGAAAAGAGAAAAG
8_Un.1136       CTGTCGGCAGAAA--GCAAAAATTAAAGAAGCGGAAAGTAGAAAGAAGAAAAGAGAAAAG
9_Un.20         TTGTCGACAGAAA--GCAAAAATTAAAGAAGCGGAAAGTAGAAAGAAGAAAAGAGAAAAG
10.45           CTGTCGGCAGAAA--GCAAAAATTAAAGAAGCGCAAA-------GAAGAAAAGAGAAAAG
11.42           TTGTCGACAGAAA--GCAAAAATTAAAGAAGCGGAAAGTAGAAAGAAGAAAAGAGAACAG
12.30           CTGTCGGCAGAAATAACAGAAATTAAAGAAGCGGAAA-------GAAGAAAAGAGAAAAG
13_Un.90        CTGTCGGCAG-------AAAAATTAAAGAAGGGGAAA-------GAAGAAAAGAGAAAAG
14.25           CTGTCGGCAG-------AAAAATTAAAGAAGGGGAAA-------GAAGAAAAGAGAAAAG
15.40           CTGTCGGCACGTA--ACAGAAATTAAAAAAGCGGAAAGTAAAAAGAAGAAAAGAGAAAAG
16.21           CTGTCGGCACGCA--AAAATTAAAGAAGAAGCGGAAAATAG---AAAGAAAAGAGAAAAG
                 *****  *        *   *   ** * * * ***        **** **    * * 

1L_1.1          GACTATAAGAAA--CAAAATTAATA------------------AAAAGAAATATCTTTTT
1R_Un.350       GACTATAAGAAA--CAAAATTAATATATA---CAAAATTAATAAAAAGATATATCTTTTT
2.43            GACTATAAGAAA--CAAAATTAATA------------------AAAAGAAATATCTTTTT
3.39            AATTATAGGAAA--CAAAATTAATA------------------AAAAGAAATATTTTTTT
4.27            GACTATAGAAAC----AAATTA-TA------------------AAAAGAAAT--CTTTTT
5.33            AACTATAGGAAC---AAAATTAATA------------------AAAAGAAATATTTTTTT
6.55            GACTATAAGAAA--CAAAATTAATA------------------AAAAGAAATATCTTTTT
7.47a           GACTATAAGAAA--CAAAATTAATATATA---CAAAATTAATAAAAAGATATATCTTTTT
7.47b           GACTATAAGAAA--CAAAATTAATA------------------AAAAGAAATATTTTTTT
8_Un.1136       GATTATAGGAAA--CAAAATTAATA------------------AAAAGAAATATCTTTTT
9_Un.20         GATTATATGAAA--CAAAATTAATA------------------AAAAGAAATAACTTTTT
10.45           GACTATAAGAAA--CAAAATTAATA------------------AAAAGAAATATTTTTTT
11.42           GATTATAAGAAA--CAAAATTAATA------------------AAAAGAAATAACTTTTT
12.30           GACTATAAGAAA--CAAAATTAATATATA---CAAAATTAATAAAAAGAAATCTTTTTTT
13_Un.90        GACTATAAGAAA--CAAAATTAATA------------------AAAAGAAATATCTTTTT
14.25           GACTATAAGAAA--CAAAATTAATA------------------AAAAGAAATATCTTTTT
15.40           GACTATAGGAAA--CAAAATTAATA------------------AAAAGAAATATCTTTTT
16.21           GACTATAGGAAAAACAAAATTAATAAACAAAACAAAATTAATAAAAAGAAATATCTTTTT
                 * ****  **     ****** **                  ****** **   *****

1L_1.1          TTT------CTTACATGAAAGGAAATATAGGAAATATAATTTGGAAACAAATTATTTATG
1R_Un.350       TTTT-----CTTACATGAAGGGAAATATAAGAAATATAAATTGGAAACGAATTATTTACG
2.43            TTT------CTTACATGAAAGGAAATATAGGAAATATAATTTGGAAACGAATTATTTATG
3.39            TTT------CTTACATGAAAGGAAATATAAGAAATATAATTTGGAAACGAATTATTTATG
4.27            TTC--------TACATGAAAGGAAATATAAGAAATATAATTTGGAA-----TTATTTATG
5.33            TTT------CTTACATGAAAGGAAATATAAGAACTATAATTTGGAAACGAATTTATTATG
6.55            TTT------CTTACATGAAAGGAAATATAAGAACTATAATTTGGAAACGAATTATTTATG
7.47a           TTTT-----CTTACATGAAGGGAAATATAAGAAATATAAATTGGAAACGAATT----ATG
7.47b           TTT------CTTACATGAAAGGAAATATAGGAAATATAATTTGGAA-----TTATTTATG
8_Un.1136       TTTTTTTTTCTTACATGAAGGAAAATATAAGAAATATAATTTGGAAACGAATTATTTATG
9_Un.20         TTTTT----CTTACATGAAGGGAAATATAAGAAATATAATTTGGAAACGAATTATTTATG
10.45           TTT------CTTACATGAAAGGAAATATAGGAAATATAATTTGGAA-----TTATTTATG
11.42           TTTTT----CTTACATGAAGGGAAATATAAGAAATATAATTTGGAAACGAATTATTTATG
12.30           TTTT-----CTTACATGAAAGGAAATATAAGAAATATAATTTGGAAAGGAATTATTTATG
13_Un.90        TTT------CTTACATGAAAGGAAATATAAGAAATATAATTTGAAAACGAATTATTTATG
14.25           TTT------CTTACATGAAAGGAAATATAAGAAATATAATTTGAAAACGAATTATTTATG
15.40           TTTT-----CTTACATGAAAGGAAAAATGAGAAATATAATTTGGAAACGAATTATTTATG
16.21           TTT--------TACATGAAGAGAAAAATAAGAACTATAATTTGGAAACGAATTATTTAAG
                **         ********   *** **  *** ***** *** **     **    * *

1L_1.1          GTTTAGAGGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTT
1R_Un.350       GTTTAGACGAGATTAACAAAAATTTAAAATTTAATATCGAAGGAAAAAAAGATTAGACTT
2.43            GTTTAGACGAGATTAACAAAAATTAAAAATTTAATATCAAAGGAAAAAAAGATTAGATTT
3.39            GTTTAGACGAGATTAACAAAAATTAAAAA----ATATCGAAGGAAAAAAAGATTAGATTT
4.27            GTTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAA-ATTAGATTT
5.33            GTT-AGACGAGATTAACACATATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTC
6.55            GTTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTT
7.47a           GTTTAGACGAGATTAACAAAAATTTAAAATTTAATATCGAAGGAAAAAAAGATTAGACTT
7.47b           GTTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTT
8_Un.1136       GTTTAGAGGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTT
9_Un.20         GTTTAGAGGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTT
10.45           GTTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTT
11.42           GTTTAGAGGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGACTT
12.30           ATTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGAAAAA----ATTAGATTT
13_Un.90        ATTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAAATTAGATTT
14.25           ATTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAAAAAAAATTAGATTT
15.40           GTTTAGACGAGATTAATAAAAATTAAAAATTTAATATCGAAGGAAAAAAAGATTAGATTT
16.21           GTTTAGACGAGATTAACAAAAATTAAAAATTTAATATCGAAGGAAA---AGATTAGATTT
                 ** *** ******** * * *** ****    ***** *** ***     ****** * 

1L_1.1          AAGAAAGCA-AAGAATCGGAATTATAACGAATAAGAATAAA----------AGGATGAA-
1R_Un.350       AAGAAAGCGGAAGAATCGGAATTATAACGAATAAGAATGAA----------AGGATGAA-
2.43            AAGAAAGCA-AAGAATCGGAATTATAACGAATAAGAATAAA----------AGGATGAA-
3.39            AAGAAAGCGGAAGAATCGGAATTATAACGAATAAGAACGAAAGGATCGAGGAGGATAAAA
4.27            AAGAAAGCGGAAAAATCGGAATTATAACGAATAAGAATGAA----------AGGATAAA-
5.33            CATAAAGCA-AAGAATCGGAATTATAACGAATAAGAATAAA----------AGGATGAA-
6.55            AAGAAAGCGGAAGAATCGGAATTATAACGAATAAGAAAGGAT----CGGGGAGGATAAAA
7.47a           AAGAAAGCGGAAGAATCGGAATTATAACGAATAAGAATGAA----------AGGATGAA-
7.47b           AAGAAAGCA-AAGAATCGGAATTATAACGAATAAGAATGAAAGGATCGGGGAGGATAAAA
8_Un.1136       AAGAAAGCGGAAGAATCGGAATTATAACGAATAAGAATGAAAGGATCGGGGAGGATAAAA
9_Un.20         AAAAAAGCA-AAGAATCGGAATTATAACGAATAAGAATGAAAGGATCGGGGAGGATAAAA
10.45           AAGAAAGCA-AAGAATCGGAATTATAACGAATAAGAATGAA----------AAGATCAA-
11.42           AAAAAAGCA-AAGAATCGGAATTATAACGAATAAGAATGAAAGGATCGGGGAGGATAAAA
12.30           AAGAAAGCA-AAGAATCGAAATTATAACGAATAAGAATGAAAGGATCGGGGAGGATAAAA
13_Un.90        AAGAAAGCA-AAGAATAGGAACTGTAAGGAATAAGAATGAA----------AAGATCAA-
14.25           AAGAAAGCA-AAGAATAGGAACTGTAAGGAATAAGAATGAA----------AAGATCAA-
15.40           AAGAAAGTGGAAGAATCGGAATTATAACGAATAAGAATGAAAGGATCGGGGAGGATAAAA
16.21           AAGAAAGCGGAAGAATCGGAATTACAACGAATAAGAATGAA----------AGGATGAA-
                 * ****   ** *** * ** *  ** *********   *          * *** ** 

1L_1.1          ---------TATTGTATTTGGAAAGTTTAAAGAAAGAAAAAGA----TTAAACGTTTAT-
1R_Un.350       ---------TATTATATTTGGAAAGTTTAAAGAAAGAAAAAGA----TTAAACGTTTAT-
2.43            ---------TATTATATTTGGAAAGTTTAAAGAAAGAAAAAGA----TTAAACGTTTAT-
3.39            CAAATAGGATAATATATTTGAAAAAATTAAAGAAATGAAAC------TCATTCTCTTTAA
4.27            ---------TAATATATTT---------AAAGAAAGAAAGAAA----TGAAACGTTTAAA
5.33            ---------TATTATATTTGAAAAGTTTAAAGAAAGCTAAAGA----TTAAACGTTTAT-
6.55            CAAAAAGGATAATATATTTGAAAAAATTAAAGAAAGAAATGAAACGTTTAAGTATTTATA
7.47a           ---------TAATATATTTGGAGAGTTTAAACAAAGAAAAAGA----TTAAACGTTTAT-
7.47b           CAAAAAGGATAATATATTTGAAAAAATTAAAGAAAAAAATGAAACGTTTAAATATTTAT-
8_Un.1136       CAAAAAGGATAATATATTTG-AAAATTTAAAGAAAGAAAGAAA----TGAAACATTTAAA
9_Un.20         CAAAAAGGATAATATATTTGAAAAAATTAAAGAAAGAAATGAAACGTTTAAGTATTTAT-
10.45           ---------TAATATATTTG-AAAATTTAAAGAAAGAAAGAAA----TGAAACATTTAAA
11.42           CTAAAAGGATAATATATTTGAAAAAATTAAAGAAAGAAATGAAACGTTTAAATATTTAT-
12.30           CTAAAAGGATAATATATTTGAAAAAATTAAAAAAAGAAA--------CGAAACATTTAAT
13_Un.90        ---------TAATATATTTG-AAAATTTAAAGAAAGAAAGAAA----TGAAACATTTAAA
14.25           ---------TAATATATTTG-AAAATTTAAAGAAAGAAAGAAA----TGAAACATTTAAA
15.40           CAAAAAGGATAATATATTTGAAAAAATTAAAAAAAGAAATAAAACGTTTAAGTATTTATA
16.21           ---------TATTATATTTG-AAAGTTTAAAGAAAGAAAAAGA----TTAAACGTTTAT-
                         ** * *****         *** ***   *          *     **   

1L_1.1          ----------------------------CATTTATCGTTGGATGGATTACTTTAAGTTTA
1R_Un.350       ----------------------------CATTTATCGTTGGATGGATTACTTTAAGTTTA
2.43            ----------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
3.39            T---------------------------CATTTATCATCGGATGGATTATTTTAAATTTA
4.27            ----------------------------TATTTAACATCGAATGAATTATTTTAAATCGA
5.33            ----------------------------CATTTATCATCGAATGGATTACTTTAAGTCGA
6.55            T---------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
7.47a           ----------------------------CATTTATCGTTGGATGGATTACTTTAAGTTTA
7.47b           ----------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
8_Un.1136       ----------------------------CATTTATCATCAGATGGATTACTTTAAATCGA
9_Un.20         ----------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
10.45           ----------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
11.42           ----------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
12.30           ----------------------------CATTTATCATCAGATGGATTACTTTAAGTGGA
13_Un.90        ----------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
14.25           ----------------------------CATTTATCATCGGATGGATTACTTTAAGTCGA
15.40           TTTATAAATATACGTTAAGTATATTTATCATTTATCATCGGATGGATTACTTTAAGTCGA
16.21           ----------------------------CATTTATCGTGGGATGGATTACTTTAAGTTTA
                                             ***** * *   *** **** ***** *  *

1L_1.1          GAAAGAATAGAGAAAAAAGAAGTTTCTTTTTAAAAACTTGGGAGTTTGGATTACATGGAC
1R_Un.350       GAAAGAATAGAGAAAAAAGAAGTTTCTTTTTAAAAACTTGGGAGTTTGGATTACATTAAC
2.43            GAAGGAATAGAGAAATATAAACTTTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAC
3.39            AAAAGAATAGAGAAA-AAGAAGTTCCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAC
4.27            GAAGGAATAAAGAAATATGAA--CTCTTTTTAAAAATTTGGGAGTTTGGATT--ATTGAC
5.33            GAAGGAATAGAGAAATATAAACTTTCTTTTTAAAAACTTGGGAGTTTGGATAACATCGAC
6.55            GAAGGAATAGAGAAATATAAACTCTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAC
7.47a           GAAAGAATAGAGAAA-AAGAGTTTTCTTTTTAAAAACTTGGGAGTTTGGATTACATGGAC
7.47b           GAAGGAATAGAGAAATATAACCTTTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAC
8_Un.1136       GAAGGAATAGAGAAATATAAACTCTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAT
9_Un.20         GAAGGAATAGAGAAATATAAACTCTCTTTTTAAAAACTTGGAAGTTTGGATTACATCGAC
10.45           GAAGGAATAGAGAAATATGAACTCTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAT
11.42           GAAGGAATAGAGAAATATAACCTTTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAC
12.30           GAAGGAATAGAGAAATATAAACTCTCTTTTTAAAAACTTGGAAGTTTGGATTACATCGAC
13_Un.90        GAAGGAATAGAGAAATATGAACTCTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAT
14.25           GAAGGAATAGAGAAATATGAACTCTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAT
15.40           GAAGGAATAGAGAAATATAAACTCTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAC
16.21           GAAAGAATAGAAAAAAAAGAAGTTTCTTTTTAAAAACTTGGGAGTTTGGATTACATCGAC
                 ** ***** * *** *  *     *********** **** *********   **  * 

1L_1.1          G--GTCTAAATGGAGGAAAGGAAATTTATTAGAATATGGAGAAAAAAAAAGAG-------
1R_Un.350       G--GTCTAAATCGAGGAAAGGAAATTTATTAAAATATTGAAAAAAAAAGGAAA-------
2.43            G--GTCTAAATCGAGGAAAGGAAATTTATTAAAATATTGAAAAAAAAAGGAAA-------
3.39            GACGTCTAAATCGAGGAAAGGAAATCTATTAGAATATTGAGAAAAAACAAAGAAAAAAAA
4.27            G--GCCTAAATCGAGGAAAGAAAATCTATTAGAATATTGACAAAAAATGAAGAAAAAAA-
5.33            G--GTCTAAATCGAGGAAAAGAAATTTATTAAAATAT-GAAAAAAAAGGAAAA-------
6.55            G--GTCTAAATCGAACAAAGAAAATTTATTAGAATATTGAAAAAAAAGGAAGAAAAAAA-
7.47a           G--GTCTAAATGGAGGAAAGGAAATTTATTAGAATATTGAGAAAAAAGGAAGACAAGAA-
7.47b           G--GTCTAAATCGAGCAAA-AAAATTAATTAGAATATTGAGAAAAAAGAAGAG-------
8_Un.1136       G--GTCTAAATCGAGGAGAGGAAATTTATTAGAATATTGAAAAAAAAGGAAAAAAAAAG-
9_Un.20         G--GTCTAAATCGAGGAAAGGAAATCTATTAGAATATTGAGAAAAAACGAAGAAAAAAA-
10.45           G--GTCTAAATCGAGGAGAGGAAATTTATTAGAATATTGAGAAAAAAAAAGAG-------
11.42           G--GTCTAAATCGAGCAAAGGAAATTAATTAGAATATTGAGAAAAAACGAAGAAAAAAA-
12.30           G--GTCTAAATCGAGGAAAGGAAATCTATTAGAATATTGAGAAAAAACGAAGA-------
13_Un.90        G--GTCTAAATCGAGGAGAGGAAATTTATTAGAATATTGAGAAAAAAAAAGAG-------
14.25           G--GTCTAAATCGAGGAGAGGAAATTTATTAGAATATTGAGAAAAAAAAAGAG-------
15.40           G--GTCTAAATCGAGCAAAGAAAATTTATTAGAATATTGAAAAAAAAGAAGAG-------
16.21           G--GTCTAAATCGAGGAAAGGAAATTTATTAGAATATTGAGAAAAAAGGAAGAAAAGAA-
                *  * ****** **  * *  ****  **** ***** ** ******             

1L_1.1          ------GAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
1R_Un.350       -------AAAAAAATGAAATCGT-AT------TTTAGGAACAGAT----------GCGTA
2.43            -------AAAAAAATGAAATCGT-AT------TTTAGGAACAGAT----------GCATA
3.39            GAAGAGGAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
4.27            -----GAAGAGGAAAAAATTTTCTAT------TTTACGAAGAGATTTTATTTTATGCGTA
5.33            --------AAAAAATGAAATCGT-AT------TTTAGGAACAGAT----------GCATA
6.55            GAAGGGAAAAAGAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
7.47a           GAAGAGGAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
7.47b           ------GAGAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
8_Un.1136       ----AGGAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
9_Un.20         GAAGAGAAAAAAAATGGAATCGTTAT------TTTACGAACAGAT----------GCGTA
10.45           ------GAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
11.42           GAAGAGAAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
12.30           -------AAAAAAATGGAATCGTTAT------TTTACGAACAGAT----------GCGTA
13_Un.90        ------GAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
14.25           ------GAAAAAAATGAAATGGTTAT------TTTACGAACAGAT----------GCGTA
15.40           ------GAGAAAAATGAAATGGTTTT------TTTACGAACAGAT----------GCGTA
16.21           GAAGAGGAAAAAAATGAAATGGTTATACGAGTTTTACGAACAGAT----------GCGTA
                         *  **   * *     *      **** *** ****          ** **

1L_1.1          CGAACGAAGCGATGAAAAAAT------------TGTTAAAAATTTATGATCGGAAGGTTT
1R_Un.350       CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGCTTT
2.43            CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATTGGAAGCTTT
3.39            CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGGTGT
4.27            CGTACGAAGTGATGAAAAAAT-------------AGTTAAAACTTATCATCGGAAGATTT
5.33            CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTATGATTGGAAGCTTT
6.55            CGAACTAAGCGATGAAAAAAT------------TGTAAAAAACTTACGACCGGAAGGTGT
7.47a           CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGGTTT
7.47b           CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGGTTT
8_Un.1136       CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGGTTT
9_Un.20         CGAACGAAGCGATGAAAAAATAGCTATTATATATATTAAAAATTTATCATCGGAAGATTT
10.45           CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGCTTA
11.42           CGAACGAAGCGATGAAAAAATAGCTATTATATATATTAAAAACTTACGATCGGAAGGTTT
12.30           CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTATGATCGGAAGGTTT
13_Un.90        CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGGTTT
14.25           CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGGTTT
15.40           CGAACGAAGCGATGAAAAAATAGCTATTATATATATTAAAAATTTATCATCGGAAGATTT
16.21           CGAACGAAGCGATGAAAAAAT------------TGTTAAAAACTTACGATCGGAAGGTTT
                ** ** *** ***********                 **** ***  *  ***** *  

1L_1.1          AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATTAGT-------
1R_Un.350       AAT--------TATTTAAAAAGAAAATTGAAAGGACAGTTTATAAAGATTAGT-------
2.43            AAT--------TATTTAAAAAGAAAATTGAAAGGACAGTTTATA----------------
3.39            AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATTAGT-------
4.27            AAT--------TATCGAAAAGGGAAATTGGAAGGATAGTTCGTAACGATTAATAAAAGGA
5.33            AAT--------TATTTAAAAAGAAAATTGAAAGGACAGTTTATAAAGATTAGT-------
6.55            AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATGAGT-------
7.47a           AAT--------TATTTAAAAAGAAAATTGGAAGGATAATTTATAAAGATTAGT-------
7.47b           AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATTAGT-------
8_Un.1136       AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATCAGT-------
9_Un.20         AAT--------TATCGAAAAGGGAAATTGGAAGGATAGTTTATAAAGATTAGT-------
10.45           AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATTAGT-------
11.42           AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATTAGT-------
12.30           AAAAAGAAAGGTATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATTCAAG------
13_Un.90        AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATCAGT-------
14.25           AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATCAGT-------
15.40           AAT--------TATCGAAAAAGGAAATTGGAAGGATAGTTTATAAAGATTAGT-------
16.21           AAT--------TATTTAAAAAGAAAATTGGAAGGATAGTTTATAAAGATTAGT-------
                **         ***  **** * ****** ***** * **  **                

1L_1.1          -------------TTATAAAAGAAG--------------TTTAAAA------AAGAAAAA
1R_Un.350       -------------TTATAAAAGAAA--------------TTTGAAA------A-GAAAAA
2.43            ------------------AAAGAAA--------------TTTGAAA------A-GAAAAA
3.39            -------------TCATAAA-GAAG--------------TTTAAAA------AAGAAAAA
4.27            AAAAAAATTGAATTTAAAAAATAAAAATTTCAGTTAGGATTTAAAAGAATGAAAAAAAAA
5.33            -------------TTATAAAAGAAA--------------TTTGAAA-------AGAAAAA
6.55            -------------TTATAAAAGAAG--------------TTTAAAA------AAGAAAAA
7.47a           -------------TTATAAAAGAAA--------------TTTTGAA------A-GAAAAA
7.47b           -------------TTATAAAAGATG--------------TTTAAAA------AAGAAAAA
8_Un.1136       -------------TTATAAAAGATG--------------TTTAAAA------AAGAAAAA
9_Un.20         -------------TTATAAAATAAG--------------TTTGAAA------A-GAAAAA
10.45           -------------TTATAAAAGATG--------------TTTAAAA------AAGAAAAA
11.42           -------------TTATAAAAGATG--------------TTTAAAA------AAGAAAAA
12.30           ------------TTCATAAAAGAAG--------------TTTGAAA-------AGAAAAA
13_Un.90        -------------TCATAAAAGAAG--------------TTTAAAA------AAAAAAAA
14.25           -------------TCATAAAAGAAG--------------TTTAAAA------AAAAAAAA
15.40           -------------TTATAAAAGAAG--------------TTTGAAA-------AGAAAAA
16.21           -------------TCATAAAAGAAG--------------TTTCAAA------A--AAAAA
                                  **  *                ***  **         *****

1L_1.1          ATTGATGACCGAAATACTTAATCAAGAA--AAGAAA----------CAAAAAATAGTTTT
1R_Un.350       ATCGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATAATAGTTTT
2.43            ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATAATAGTTTT
3.39            ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATA--AGTTTT
4.27            ATTGAGGATCGGAATATTTATTCGAAAAGGAAGAAACAATAAAATTGGAGAAGCAATTAT
5.33            ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAAGAATAGTTTT
6.55            ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATAATAGTTTT
7.47a           ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATAATAGTTTT
7.47b           ATTGATGATCGAAATACTTAATCAAGAA--AAGAGA----------GAAATAATAGTTTT
8_Un.1136       ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAATTAATAGTTTT
9_Un.20         ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATAATAGTTTT
10.45           ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATATTAGTTTT
11.42           ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATAATAGTTTT
12.30           ATTGATGATCGAAATACTTAATCAAGAA--AAGAAA----------GAAATAATAGTTTT
13_Un.90        ATTGGTGATCGAAATACTTAATCAAAAA--AAGAAA----------GAAATAATAGTTTT
14.25           ATTGGTGATCGAAATACTTAATCAAAAA--AAGAAA----------GAAATAATAGTTTT
15.40           ATTGATGATCGAAATATTTAATCAAGAA--AAGAAA----------GAAATAATAGTATT
16.21           ATTGATGAGCGAAATACTTAATCAAAAA--AAGAAA----------TAATAGTTTTTTTT
                ** *  ** ** **** *** ** * **  **** *            *       *  *

1L_1.1          TTTTTTT----------CGCTAGGAAATGGAACACTAGCACGATCTATTTATACGCGGAG
1R_Un.350       TTTTTTT----------CGCTAGGAAATGGAACACTAGCGCGATCTATCTATACGCGTGG
2.43            TTTTTTT----------CGCTAAGAAATGGAACACTAGCGCGATCTATCTATACGCGTGG
3.39            TTTTTTC----------CGCTAGGAAATGGAACACTAGCGCGATCTATCCATACGCGGAG
4.27            TTTTCCTTCG--------ACTAGGAAATGGAAAAGTGGCGCGATCTATCGAGACACGGAA
5.33            TTTTTTT----------CGCTAGGAAATGGAACACTAGCGCGATCTATCTATACGCGTGG
6.55            TTTTCCC----------CGCTAGGAAATGGAACACTAGCGCGATCTATCCATACGCGGAG
7.47a           TTTTTTC-----------GTTAGGAAATGGAATACTAGCGCGATCTATCTACACGCGAAG
7.47b           TTTTTTC-----------GCTAGGAAATGGAACACTAGCGCGATCTATCTACACGCGAAG
8_Un.1136       TTTTTTC-----------GCTAGGAG-TGGAACACTAGCGCGATCTATCTATACGCGGAG
9_Un.20         TTTTTTTTTTATTTTTTCGCTAGGAAATGGAACACTAGCGCGATCTATCCATACGCGGAG
10.45           TTTTTTTTTT---TTTTCGTTAGGAAATGGAACACTAGCGCGATCTATCAACACGCGAAG
11.42           TTTTTTTTTTATTTTTTCGCTAGGAAATGGAACACTAGCGCGATCTATCCATACGCGGAG
12.30           CTTTTTC----------CGCTAGGAAATGGAACACTAGCGCGATCTATCCATATGCGGAG
13_Un.90        TTTTTTT----------CGCTAGGAAATGGAACACTAGCGCGATCTATCTATACGCGAAG
14.25           TTTTTTT----------CGCTAGGAAATGGAACACTAGCGCGATCTATCTATACGCGAAG
15.40           TTTTTTTT---------CGCTATGAAATGGAACACTAGCGCGATCTATCTATACGTGGAA
16.21           TTTTTTT----------CGCTAGGAAATGGAACACTAGCGCGATCTATCTATACGCGGAG
                 ***                ** **  ***** * * ** ********  * *   *   

1L_1.1          GAATTAGCGGGGAATAATAAGGAGATAGATGGCACTAACCGTATATTCTCATTAATTTTA
1R_Un.350       GAATTAGC-GGGGATAATAAAGAAATAGATGACACTGACCGTATATTCTCATTAATTCTA
2.43            GAATTAGC-GGGGATAATAAAAAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
3.39            GAATTAGCGGGGAATAATAAGGAGATAGATAGCATTGACCGTATATTCTCATTAATTCTA
4.27            AAATTAACGAAGGATAGTAAGGAGATAAATGGCACTGACCGTATATTCTCATTAATTCAA
5.33            GAATTAGC-GGGGATAATAAAAAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
6.55            GAATTAGCGGGGGATAATAAGGAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
7.47a           GAATTAGCAGGGGATAGTAAGAAGAGAGATGGCACTGACCGTATATTCTCATTAATTCTA
7.47b           GAATTAGCAGGGGATAATAAGAAGAGAGATGACACTGACCGTATATTCTCATTAATTCTA
8_Un.1136       GAAGTAGCGGATCATA--AAGGAGATAGATGGCATCAATCGTATATTCTTGTTC-CACTA
9_Un.20         GAATTAGC-GGGGATAATAAGGAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
10.45           GAATTAGCAGGGGATAGTAAGAAGAGAGATGGCACTGACCGTATATTCTTATTAATTCTA
11.42           GAATTAGC-GGGGATAATAAGGAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
12.30           GAATTAGCGGGGGATAATAAGGAGATAGATAGCATTGACCGTATATTCTCATTAATTCTA
13_Un.90        GAATTAGCGGAGGATAATAAGGAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
14.25           GAATTAGCGGAGGATAATAAGGAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
15.40           GAATTAGC-GGGGATAATAAGGAGATAGATGGCACTGACTGTATATTCTCATTAATTCTA
16.21           GAATTAGCGGAGGATAATAAGGAGATAGATGGCACTGACCGTATATTCTCATTAATTCTA
                 ** ** *     ***  **  * * * **  **   *  *********  **      *

1L_1.1          TC-----------GTTTATTATTA--------ATTACGAAAATTATTA-----ATTAAGA
1R_Un.350       CC-----------ATTTATTAATA--------ATTACGATAATTATTACGATAATTAACA
2.43            CC-----------ATTTATTAATA--------ATTGCGATAATTATTACGATAATTAACA
3.39            CC-----------GTTTATTATTA--------ATTACGAAAATTATTA-----ATTAAGA
4.27            CC-----------GTTTATTATTA--------ATTACGATAATTATTA-----ATTAAGA
5.33            CC-----------ATTTATTAATA--------ATTACGATAATTATTACGATAATTAACA
6.55            CC-----------GTTTATTATTA--------ATTACGAAAATTATTA-----ATTAAGA
7.47a           TTT---ATTATTAATTTATTATTACGTTTATTATTACGATCATTATTA-----ATTAATA
7.47b           CCGTTTATTATTAATTTATTATTACGTTTATTATTACCATAATTATCA-----ATTAAAA
8_Un.1136       TTGACCATTCGAAACATAATTTAATCGGAATAATATCGGATAACAATAATA-AATGGAAA
9_Un.20         CCGTTTATTATTAATTTATTATTACGTTTATTATTACCATAATTATCA-----ATTAAAA
10.45           CCGATTATTATTAATTTATTATTACGTTTATTATTACCATAATTATTA-----ATTAAAA
11.42           CCGTTTATTATTAATTTATTATTACGTTTATTATTACCATAATTATCA-----ATTAAAA
12.30           CC-----------GTTTATTATTA--------ATTACGAAAATTATTA-----ATTAAGA
13_Un.90        CCGTTTATTATTAATTTATTATTACGTTTATTATTACGATTATTATTA-----ATTAATA
14.25           CCGTTTATTATTAATTTATTATTACGTTTATTATTACGATTATTATTA-----ATTAATA
15.40           CCGTTTATTATTAATTTAATATTACGTTTATTATTACGATAATTATTA-----ATTAATA
16.21           CC-----------GTTTATTATTA-ATTTATTATTACGATAATTATTA-----ATTAATA
                                ** *   *        **  *    *  *  *     **  * *

1L_1.1          AATAATGAAAGCGTTTTGAAAGTATAA-----------AAATACAA--------------
1R_Un.350       AATAATGAAAGCGTTTCGAAAGTATAA-----------AAGTACAA--------------
2.43            AATAATGAAAGCGTTTCGAAAGTATAA-----------AAGTACAA--------------
3.39            AATAACGAAAGCGTTTCGAAAGTGTAA-----------AAGTACAA--------------
4.27            AATAATGAAAGCGTTTCGAAAGTATAA-----------AAGTACAA--------------
5.33            AATAATGAAAGCGTTTCGAAAGTATAA-----------AAGTACAA--------------
6.55            AATAATGAAAGCGTTTCGAAAGTGTAA-----------AAGTACAA--------------
7.47a           AATAATGAAAGCGTTTCGAAAGTATAA-----------AAATACAA--------------
7.47b           ATTAATGAAAGCGTTTCGAAAGTATAA-----------AAATACAA--------------
8_Un.1136       AAGGAATCGGGTGATCCGAAATTATAATAAACAATATTAAATATCATTTTCATCTTTCTC
9_Un.20         ATTAATGAAAACGTTTCGAAAGTATAA-----------AAATACAA--------------
10.45           ACTAATGAAAGCGTTTCGAAAGTATAA-----------AAATACAA--------------
11.42           ATTAATGAAAACGTTTCGAAAGTATAA-----------AAATACAA--------------
12.30           AATAATGAAAGCGTTTCGAAAGTGTAA-----------AAGTACAA--------------
13_Un.90        AATAATGAAAGCGTTTCGAAAGTATAA-----------AAGTACAA--------------
14.25           AATAATGAAAGCGTTTCGAAAGTATAA-----------AAGTACAA--------------
15.40           AATAATGAAACCGTGTCGAAAATATAA-----------AAATACAA--------------
16.21           AATAATAAAAGCGTTTCGAAAGTATAA-----------AAATACAA--------------
                *   *       *    **** * ***           ** **  *              

1L_1.1          ----------CGAAGTTTTCGTT---------------------GGGATTATT-------
1R_Un.350       ----------CGAGGTTTTCATT---------------------GGGATTATC-------
2.43            ----------CGAGGTTTTCATT---------------------GGGATTATC-------
3.39            ----------CGAGGTTTTCGTT---------------------GGGATTATC-------
4.27            ----------CGAGGTTT-CGTC---------------------GGGATTATC-------
5.33            ----------CGAGGTTTTCATT---------------------GGGATTATC-------
6.55            ----------CGAGGTTTTCGTT---------------------GGGATTATC-------
7.47a           ----------CGAGGTTTTCGTT---------------------GGGATTATC-------
7.47b           ----------CGAGGTTTTCGTT---------------------GGGATTATC-------
8_Un.1136       CTTTTCTCTTCAAAGTTTCAACTTTATCATCTTTATTACTTTACGGTATCATTACATCAT
9_Un.20         ----------CGAGGTTTTCGTT---------------------GGGATTATC-------
10.45           ----------CGAGGTTTTCGTT---------------------GGGATTATT-------
11.42           ----------CGAGGTTTTCGTT---------------------GGGATTATC-------
12.30           ----------CGAGGTTTTCGTT---------------------GGGATTATC-------
13_Un.90        ----------CGAGGTTTTCATC---------------------GGGATTATC-------
14.25           ----------CGAGGTTTTCATT---------------------GGGATTATC-------
15.40           ----------CGA-------------------------------GGGGTTATC-------
16.21           ----------CGA-------------------------------GGGATTATC-------
                          * *                               **  * **        

1L_1.1          -----TCTTCTTTCTAC----CAGAAACTCATTAC------------AAAGAATTTGAAA
1R_Un.350       -----TCTTCTTTCTAT----AAAAACCTCATTAC------------AAAGAATTTGCAA
2.43            -----TCTTCTTTCTAT----AAAAACCTCATTAC------------AAAGAATTTGCAA
3.39            -----TCTTCTTTCTAC----AAGAAACTCATTAC------------AAAGAATTTGAAA
4.27            -----TCTTCTTTCTAT----AAAAAACACATTAC------------AAAAAATTTGGAA
5.33            -----TCTTGTTTCTAT----AAAAACCTCATTAC------------AAAGAATTTGCAA
6.55            -----TCTTCTTTCTAC----AAGAAACTCATTAC------------AAAGAATTTGAAA
7.47a           -----TCTTCTTACTAG----AAGAAGCTCATTAC------------GAAGAATTTGGAA
7.47b           -----TCTTCTTTCTACT---AAGAAACTCATTAC------------AAAGAATTTGGAA
8_Un.1136       TCCGTCTTTCCTTATACAGATATAAAATTCATTAGTTTATACGATAAAAAAAATATGAAT
9_Un.20         -----TCTTCTTTCTACT---AAGAAACTCATTAC------------AAAGAATTTGGAA
10.45           -----TTTTCTTTCTAC----AAGAAACTCATTAC------------AAAGAATTTGAAA
11.42           -----TCTTCTTTCTACT---AAGAAACTCATTAC------------AAAGAATTTGGAA
12.30           -----TCCTCTTTCTAC----AAGAAACTCATTAC------------AAAGAATTTGAAA
13_Un.90        -----TCTTCTTTCTAC----AAAAACCTCATTAC------------AAAGAATTTGCAA
14.25           -----TCTTGTTTCTAT----AAAAACCTCATTAC------------AAAGAATTTGCAA
15.40           -----TCTTCTTTCTAC----AAGAAACTCATTAC------------AAAGAATTTGAAA
16.21           -----TCTTCTTAACAC----AAGAAGCTTATTAC------------AAAGAATTTGGAA
                        *  *   *        **    ****              ** *** ** * 

1L_1.1          --ATAAATTTAAAAAGAG---------AATAAAGATTATA----TATATATAAACGTAT-
1R_Un.350       --ATAAATTTAAAAAGA------------------TTATA----AATATCGAAACGTAT-
2.43            --ATAAATTTAAAAAGA------------------TTATA----AATATCGAAACGTAT-
3.39            --ATAAATTTAAAAAGAG---------AAGAAAGATTATA----AATATCGAAACGTAT-
4.27            --ATAAATTTAAAAAGAT---------AATAAAGATTATA----AATATCGAAACGTAT-
5.33            --ATAAATTTAAAAAGA------------------TTATA----AATATCGAAACGTAT-
6.55            --ATAAATTTAAAAAGAG---------AATAAAGATTATA----AATATCGAAACGTAT-
7.47a           --ATAAATTTAAAAAGAT---------AATGAAGATTATA----AATATCGAAACGTAT-
7.47b           --ATAAATTTAAAAAAAG---------AATAAAGATTAGA----AATATCGAAACGTAT-
8_Un.1136       CCGTATATCTCGATATTTCATTTATCGAATGATGATTATATCGGAATATTCAATCACGTT
9_Un.20         --ATAAATTTAAAAAAAG---------AATAAAGATTAGA----AATATCGAAACGTAT-
10.45           --ATAAATTTAAAAAGAG---------AATAAACATTATA----AATATCGAAACGTAT-
11.42           --ATAAATTTAAAAAAAG---------AATAAAGATTAGA----AATATCGAAACGTAT-
12.30           --ATAAATTTAAAAAGAG---------AAGAAAGATTATA----AATATCGAAACGTAT-
13_Un.90        --ATAAATTTAAAAAGAT---------AATAAAGATTAGA----AATATCGAAACGTAT-
14.25           --ATAAATTTAAAAAGA------------------TTATA----AATATCGAAACGTAT-
15.40           ---TAAATTTAAAAAGAG---------AATAAAGATTACA----AATATGGAAACGTAT-
16.21           --ATAAATTTAAAAAGAT---------AATGAAGATTATA----AATATCGAAACGTAT-
                   ** ** *  * *                    *** *     ****  ** *   * 

1L_1.1          -----ACAATAAGAATC------GAAAGC--GTACGTCTGTTTCGATTCGCGTTCGAAGA
1R_Un.350       -----ATAATAAGAATC------GAAAGC--ATACGTTCGCTTCAATCCGCGTTCGGAGA
2.43            -----ATAATAAGAATC------GAAAGC--ATACGTTCGCTTCAATCCGCGTTCGGAGA
3.39            -----ACGATAAGAATG------GAAAGC--GTACGTCTATTTCGATCCGCGTTCGGAGA
4.27            -----AGAATAAGAATC------GAAAGC--GTACGTCTATTTCGATCCGCGTTCGGAGA
5.33            -----ATAATAAGAATC------GAAAGC--ATACGTTTGCTTCAATCCGCGTTCGGAGA
6.55            -----ACGATAAGAATG------GAAAGC--GTACGTCTATTTCGATCCGCGTTCGGAGA
7.47a           -----AGAATAAGAATC------GAAAGC--GTAC----ATTTCGATCCGCGTTCGGAGA
7.47b           -----ATAATAAGAGTC------GAAAGT--GTACGTCTGTTTCGATCCGCGTTCGGAGA
8_Un.1136       GTAAAGCGATAAAATTTATTCAGGAGAGCAAGAACGTTCGTCTCATTTCGCGATCGAAAA
9_Un.20         -----ATAATAAGAGTC------GAAAGT--GTACGTCTGTTTCGATCCGCGTTCGGAGA
10.45           -----ATAATAAAAATG------GAAAGC--ATACGTCTGTTTCGATCCGCGTTCGGAGA
11.42           -----ATAATAAGAGTC------GAAAGT--GTACGTCTGTTTCGATCCGCGTTCGGAGA
12.30           -----ACGATAAGAATG------GAAAGC--GTACGTCTATTTCGATCCGCGTTCGGAGA
13_Un.90        -----ACAATAAGAATT------GAAAGT--GT----CTAATTCGATCAGTGTTTAGAGA
14.25           -----ATAATAAGAATC------GAAAGC--ATACGTTTGCTTCAATCCGCGTTCGGAGA
15.40           -----ACAATAAGAATC------GAAAGC--GTACGTCCGTTTCGATTCGTGTTCGGAGA
16.21           -----AGAATAAGAATC------GAAAGC--ATACGTTTATTTCGATCCGCGTTCGGAGA
                        **** * *       ** **              **  *  * * *   * *

1L_1.1          CCGACTATATTTACTCGAAA------CGCGCACAATGATAATCGA-----AA------TA
1R_Un.350       CCGATTACATTTACTCGAAA------CGCATACAATAACAGT------------------
2.43            CCGATTACATTTACTCGAAA------CGCGTACAATAACAAT------------------
3.39            TAGATTACATTTACTCGAAA------CTCGTACAATAACAATAGATGTACA-------TA
4.27            TCGACTACATTTACTCGAGA------CGTGTAAAATAACAATCGGCGTACATAATAT-TT
5.33            CCGATTACATTTACTCGAAA------CGCGTACAATAACAAT------------------
6.55            TAGATTACATTTACTCGAAA------CTCGTACAATAACAATAGGTGTATA-------TA
7.47a           TCGACTACATTTATTCGAAA------CGTGTATAATAACAATCGGCGTATAA------TA
7.47b           CCGACTACATTTACTCGAAA------CGCGTACAATAACAATAGGTGTATA-------TA
8_Un.1136       TCGACTACGTTTAATCGAATAGAAATCGTATAAAATAACAATCGAAAG----------CG
9_Un.20         CCGACTACATTTACTCGAAA------CGCGTACAATAACAATAGGTGTATA-------TA
10.45           CCGACTACATTTATTCGAAA------CGTGTATAATAACAATCGGCGTACA-------TA
11.42           CCGACTACATTTACTCGAAA------CGCGTACAATAACAATAGGTGTATA-------TA
12.30           TAGATTACATTTACTCGAAA------CTCGTACAATAACAATAGGTGTATA-------TA
13_Un.90        CCGACTACATTTACTCGAAA------CGCGTACAATAACAAT------------------
14.25           CCGATTACATTTACTCGAAA------CGCGTACAATAACAAT------------------
15.40           CCGACTACATTTACTCGAAA------CGTGTACAATAACAATCGATGTATA-------TA
16.21           TCGACTACATTTACTCGAAA------CGCGTAAAATAACAATCGGCGTACATAATATTTA
                  ** **  **** ****        *    * *** * * *                  

1L_1.1          ATATTTGGCATAATTTTATAATCGGTAAGCGATTACGTTGAACCGATATATATATATTAA
1R_Un.350       -----CAGCGTAACTTTATATTCGGTT-GCGTTGAA-CTGAT---ATATATATATAATAA
2.43            -----CGGCGTAACTTTATATTCGGTT-GCGTTGAA-CTGAT---ATATATATATAATAA
3.39            ATATTTGGTGTAACTTTATATTCGATAAGCGATTACGTTGAATCGATATATCCATGATAA
4.27            ACAATCGGTGTAACTTTACATTCGGTAAGCGAT-----TGAACCGATATATATATAATA-
5.33            -----CGGCGTAACTTTATATTCGGTT-GCGTTGAA-CTGA-----TATATATATAATAA
6.55            ATATTTGGTGTAACTTTATATTCGGTAAGCGATTACGTTGAACCGATATATACATGATAA
7.47a           ATATTTGGCGTAACTTTATATTCGGCAAGCGATTACATAGAATCGATACATGTATAATA-
7.47b           ATATTTGGTGTAACTTTATATTTGGTAAGCGATTACGTTGAACCGATATATACATGATAA
8_Un.1136       TACATCAGTTTCCATCCGCGTTCGGAGATCGACTACATTTACTCGAAACGCGTAGAATAA
9_Un.20         ATATTTGGTGTAACTTTATATTTGGTAAGCGATTACGTTGAACCGATATATACATGATAA
10.45           ATATTCGGCGTAACTTTATATTCGGCAAGCGATTATATAGAATCGATATATATATA-TAA
11.42           ATATTTGGTGTAACTTTATATTTGGTAAGCGATTACGTTGAACCGATATATACATGATAA
12.30           ATATTTGGTGTAACTTTATATTCGGTAAGAGATTACGTTGAACCAATATATACATAATAA
13_Un.90        -----CGGCGTAACTTTATATTCGGTT-GCGTCGAACTGATAT--ATATATATATAATAA
14.25           -----CGGCGTAACTTTATATTCGGTT-GCGTTGAA-CTGA-------TATATATAATAA
15.40           ATATTCGGCATAACTTTATATTCGGCAAGCGATTACATAGAACCG--ATATATATAATG-
16.21           CAATTCGGTGTAACTTTATATTCGGTAAGCGATTACGTTGAATCGATATATATATAATAA
                       *  *   *      * *      *                      *   *  

1L_1.1          TAA-------------ATATATAT------AATGGC-------AATTGACATAACTAATT
1R_Un.350       TAA-------------ATATATAT------AACGAC-------AATTACCATAACTAATT
2.43            TAA-------------ATATATAT------AACGAC-------AATTACCATAACTAATT
3.39            GAA-------------ATACATAT------AATGAC-------AATTGCTATAACTAATT
4.27            ----------------AGATATAT------AATAAA-------AATTACCGTAATTAACC
5.33            TAA-------------ATATATAT------AAGGAC-------AATTACCATAACTAATT
6.55            GAA-------------ATATATAT------AACGAC-------AATTGCTATAACTAATT
7.47a           ----------------ACATATAA------AATAAA-------AATTGGCATAACTAATT
7.47b           GAA-------------ATATATAT------AATGAC-------AATTGTTATAACTAATT
8_Un.1136       CAATCGGCGTAACTTTATATATATTCGGTAAACGATTGCGTTGAACTGATATATATAATC
9_Un.20         GAA-------------ATATATAT------AATGAC-------AATTGTTATAACTAATT
10.45           TA--------------ACATATAA------AATAAA-------AATTGGCACAACTAATT
11.42           GAA-------------ATATATAT------AATGAC-------AATTGTTATAACTAATT
12.30           GAA-------------ATATATAT------AATGAC-------AATTGCTATAACTAATT
13_Un.90        TAA-------------ATATATAT------AATGAC-------AATTACCATAACTAATT
14.25           TAA-------------ATATATAT------AACGAC-------AATTACCATAACTAATT
15.40           ----------------ACATATAA------AATAAA-------AATTGCCATAACTAATT
16.21           GAT-------------ATATATAT------AATGAC-------AATTACCATAATTAACC
                                * * ***       **           ** *     *  ***  

1L_1.1          ATTAATATTAACACTATCACTATTA--TAATCATTATTATTAACATTC-CCATTTTTTTT
1R_Un.350       ATTAATATTAACACTATCACTATTA--TAATCATTACTGCTCTCATTC-CCATTTCTATT
2.43            ATTAATATTAACACTATCACTATTA--TAATCATTACTGCTCTCATTC-CCATTTCTATT
3.39            ATTAATATTAACACAATCACAACTA--CTATCATTATTATCATTCCTTATCATTCCCATT
4.27            ATTAATATCGACATTAACACTATTA--TCATCATTATCGTTACTATTA-CTATTACCATT
5.33            ATTAATATTAACACTATCACTATTA--TAATCATTACTGCTCTCATTC-CCATTTCTATT
6.55            ATTAATATTAACACAATCACAACTA--CTATCATTATTATCATTCCTTATCATTCCCATT
7.47a           ATTAATATTAACATTATTACTATTA--TAATCATTACTGTTATGATTT-CCATTTCC-TT
7.47b           ATTAATATAAACACAATTACAACTA--CTATCATTATTGTTATTATTC-CCATTTTTATT
8_Un.1136       ACATATTCCATTCTCAT-ACCATTACTTTACCATTCCCATTATCATTT-CCATTCCCATT
9_Un.20         ATTAATATTAACACAATTACAACTA--CTATCATTATTGTTATTATTC-CCATTTTTATT
10.45           ATTAATATTAACATTATTACTACTA--TAATCATTACTGTTATCATTT-CCATTTCTATT
11.42           ATTAATATTAACACAATTACAACTA--CTATCATTATTGTTATTATTC-CCATTTTTATT
12.30           ATTAATATTAACACAATCATTATTA--TCATAACTACTATCATTATTA-TCATTCC--TT
13_Un.90        ATTAATATTA-TACTATCACTATTA--TAATCACTACTGTTATCATTC-CCATTTCTATT
14.25           ATTAATATTAACATTATCACTATTA--TAATCATTACTGCTCTCATTC-CCATTTCTATT
15.40           ATTAATATTAACACTATTACTATAA--TAATCATTATTGCTATCATTT-CTATTTCTATT
16.21           ATTAATATCAACATTAATACTATCA--TTCCCATTTCTATTACCATTT-CCATTCCC-TT
                *   **         *  *  *  *       * *           *    ***    **

1L_1.1          AT-CATTTCCATTTCCAT--TATCAA--TTTTATTTTTATTACCATT-------------
1R_Un.350       AC-CATTTCCATTCCC------TTAT--TATTA----CTTTACCATT-------------
2.43            AC-CATTTCCATTCCC------TTAT--TATTA----CTTTACCATT-------------
3.39            TT-TATTACTCATTAC------------CACTA--CCTATTACTATTA------------
4.27            AC-CATTACCATTATGCTATTATCAT--TGTTGTTACCATTGCCGTT-------------
5.33            AC-CATTTGCATTCCCT--------TATTATTA----CTTTACCATT-------------
6.55            TT-TATTACTCATTAT------TCAC--TACC-----TATTACTATTA------------
7.47a           AC-CATTATT--TTAT------TA----TTCC-----TATTACCATT-------------
7.47b           ACTCATTATCACTACC---------------------TATTACTATTA------------
8_Un.1136       AC-CATTTCGATTCTTAT----TACCATTTCTATTTCCATTACTATT-------------
9_Un.20         ACTCATTATCACTACC---------------------TATTACTATTA------------
10.45           AC-CATTTCCATTTCCTTACCATTATTTTACCATTCCCATTACCATT-------------
11.42           ACTCATTATCACTACC---------------------TATTACTATTA------------
12.30           AT-CATTCCCATTT-------------------------TTATTACT-------------
13_Un.90        AT-CATTCCCATTTCT----------------------ATTACCATT-------------
14.25           AC-CATTTCCATTCCC------TTAT--TATTA----CTTTACCATT-------------
15.40           AC-CATTTCCATTTCCTTACCATTATTTTATCATTTCCATTACCATTTTCATTCTTTACT
16.21           AT-CATTACTTTACCAT-----------TCCCATTACCATTTCCATT-------------
                    ***                                **     *             

1L_1.1          ---TCTATTCCTATTACTATTTCTATTCCCATTACCATTTCCATTCCCATTACCATTATC
1R_Un.350       ---TCCATTCCCATTATCATTCCCATTCCTATTACCATTCTCATTCCTATTCCTATTATC
2.43            ---TCCATTCCCATTATCATTCCCATTCCTATTACCATTCTCATTCCTATTCCTATTATC
3.39            ---TTTATTATCATTACCATTACAATTCTCATTCTCATTACCATTTTCATTCCTATTACC
4.27            ---ACGATTACCGTTACTATTGCCGTTTCCATTGCCGTTGCCATTGCCGTTGCCATTACC
5.33            ---TCCATTCCTATTATCATTCCCATTCCTATTACCATTCTCATTCCTATTCCTATTATC
6.55            ---TTTATTATCATTAGCATTACAATTCTCATTCTCATTACCATTTTCATTCCTATTACC
7.47a           ---TTTATTCCCATTACTACTTCTATTCCCATTATCATTCCCATTCCTATTTCTATTACC
7.47b           ---TTTATTATCATTACCATTACCATTACAATTCTCATTTTAATTTTCATTCCTATTACC
8_Un.1136       ---TCTATTTCCATTACTATTTCTATTCCAATTACCATTTTCATTCCCATTTCTATTACC
9_Un.20         ---TTTATTATCATTACCATTACCATTACAATTCTCATTTTAATTTTCATTCCTATTACC
10.45           ---TCCATTCTTATTACCATTTCTATTCCCATTACTACTTCTATTCCCATTACTATTCCC
11.42           ---TTTATTATCATTACCATTACCATTACAATTCTCATTTTCATTTTCATTCCTATTACC
12.30           -----------CATTACCACTACC--TATTACTATTATTT--ATTATCATTACCATTACA
13_Un.90        ---------CTTACTTCCATTATCATTCTTATTATCGCTCCCATTCCCATTACTACTACC
14.25           ---TCCATTCCCATTATCATTCCCATTCCTATTACCATTCTCATTCCTATTCCTATTATC
15.40           ATTTCTATTCCCATTACTATTTCTATTCCCATAACCATTCCTATTCCTATTTGTATTACT
16.21           ---CTTATTACCATTTGTATTCCCATTACAATTTCCATTCCCATTACCATTCCTATTACC
                              *   * *     *   *       *   ***    **   * *   

1L_1.1          ATTCTTATTTCCC-TTCCCATTACCATTTTCATTCCTATTTCCATTACCATTCTCATTC-
1R_Un.350       ATTCTCATTCTTA-TTCCCATTACTATTCTTATTCCGATTCCTATTACCATTCTCATTC-
2.43            ATTCTCATTCTTA-TTCCCATTACTATTCTTATTCCGATTCCTATTACCATTCTCATTC-
3.39            ATTCTTATTTCCA-CTCCCATTACTATTACTATTCTTACTCTCATATCTACTTCCAGAAA
4.27            GTTACCATTGCCG-TTTCCATTGCCGTTGCCATTGCCGTTACCATTGCCGTTTCCATTG-
5.33            GTTCTCATTCTTA-TTCCCATTACTATTCTCATTCCGATTCCTATTACCATTCTCATTC-
6.55            ATTCTTATTTCCA-CTCCCATTACTATTACTATTCTTATTCCCATATCTACTTCCAGAA-
7.47a           ATTCTCATTCTTA-TTCTCATTTCAATTACCATTCTCACTCCTATTACCATAATCATCA-
7.47b           ATTCTTACTTCCA-CTCCCATTACTATTACTATTCTTATTCCCATATCTACTTCCACTA-
8_Un.1136       ATTCACATTCCTA-TTCCTATTACCATTCTCATTCTTATTTCCATTACCATTCTCATTCC
9_Un.20         ATTCTTACTTCCA-CTCCCATTACTATTACTATTCTTATTCCCATATCTACTTCCACTA-
10.45           ATTCCTATTTCTA-TTACCATTCTCATTCTTATTCCCATTCCAATTACCATTCTCATTA-
11.42           ATTCTTACTTCCA-CTCCCATTACTATTACTATTCTTATTCCCATATCTACTTCCACTA-
12.30           ATTCTCATTCTCA-TTCCTATTACCATAATTATCACTATTACCATTACTATTAA------
13_Un.90        ATTCCAAATAATAATTATCATTATCATTACCATTAACATTACCATTGATACCATCATTA-
14.25           ATTCTCATTCTTA-TTCCCATTACTATTCTCATTCCGATTCCTATTACCATTCTCATTC-
15.40           ATTCTCATTCTTA-TTCCCATTACTATTCTTATTTCCATTCCAATTACCATTCTCATTA-
16.21           ATTCTCATTCCTA-TTCCTATTATCATTCTCATTCTTATTTCCATTACCATTATCATTC-
                 **   * *      *   ***    *    **      *   **               

1L_1.1          -----TCATTA-CATTAAGATTCTCATTCCTATTACCATAACTATCACCATTACTATTA-
1R_Un.350       -----CTATTCCCATTACCATTTTGGTTTCGATCCTTATTATCAGTCTTATTCTCATTT-
2.43            -----CTATTCCCATTACCATTTTGGTTTCGATCCTTATTATCAGTCTTATTCTCATTT-
3.39            -----CCATTACCACTACCACAACCATTATTATTATCAATATTACTACTATTCTGA----
4.27            -----CCGTTGCCATTCTCATTGTCATTCCCATTCCCATTGTAATTCCCATTTCTATTA-
5.33            -----CTATTCCCATTACCATTTTGATTTCGATCCTTATTATCATTCTTATTCTCATTT-
6.55            -----ACATTACCACTACCACAACCATTATTATTATCAATATTACTACTATTCTGA----
7.47a           -----CCATTATCATCACCATTACCACTATTATTATCATTCTCATTCCTATT---A----
7.47b           -----CTATTACCACTATCACAACCATTATTATTATCAATATTACTACTATTCTGA----
8_Un.1136       GATTTCTATTACCATGCTTACTCGCATTCCCATTACCATTTTCATACCTATTACCATAA-
9_Un.20         -----CTATTACCACTATCACAACCATTATTATTATCAATATTACTACTATTCTGA----
10.45           ------TATTATCATAACCATCATCATTACCATTACCATTCTCATTCTCATTCCTATTA-
11.42           -----CTATTACCACTATCACAACCATTATTATTATCAATATTACTACTATTCTGA----
12.30           ------TATTACAATCGATACCATCATTATCAGTATTATTATTATTATTATT--------
13_Un.90        -----TTGGTATCATTCCTATTGCTAATTCAACTGCTACCTTTATAATTATTA-AAGAT-
14.25           -----CTATTCCCATTACCATTTTGATTTCGATCCTTATTATCATTCTTATTCTCATTT-
15.40           -----CTATTACCATAATTATCACCATTACCATTACTATTCTTATTCTCATTCCCATTAT
16.21           -----TTATTCCCATTCCCATTATCATTTTCATAATTATTACCATAACCATAACTATAA-
                         *   *     *       *   *     *     *     **         

1L_1.1          -ATATCATCGTTACTATCACCATTAATATT------ATCATTATCATTA---CTATTATC
1R_Un.350       -CCATTACCATTTTCATTTCGATTTCTATT------ACCATTTTCATTT---CGATTCCT
2.43            -CCATTACCATTTTCATTTCGATTTCTATT------ACCATATTCATTT---CGATTCCT
3.39            -ATAAAATCGTTATCGTTATAATTTTTATT------AAAAATTAAAAATT-ATAATTAAC
4.27            -CCATTACCATTATTATTACAATTGCCATT------ATCAATATTATTAT--CATTACCT
5.33            -CCATTACCATTTTCATTTCGACTTCTATT------ACCATTTTCATTT---TGATTCCT
6.55            -ATAAAATCGTTATCGTTATAATTCTTATT------AAAATTAAAAATT---ATAATTAA
7.47a           -CCATAACCATCACCATTAACATTACCATT------ACTATTCTCATTC---CTATT---
7.47b           -ATAAAATCGTTATCGTTATAATTCTTATT------AAAAATTAAAAAAA-ATAATTAAC
8_Un.1136       -CAATCACCATTACCATTACCATTCTCATTTTCATCACTATTACCATTACTATTATTATT
9_Un.20         -ATAANATCGTTATCGTTATAATTCTTATT------AAAAATTAAAAAAA-ATAATTAAC
10.45           -CCATAACAATCATCATTACCATTACCATT------CTCATTCTCATTC---TTATTACC
11.42           -ATAAAATCGTTATCGTTATAATTCTTATT------AAAAATTAAAAAAA-ATAATTAAC
12.30           ---ACAATCGCTATCGTAACAATTATTATTA-----AAGATTAAAAACTA--TTATTAAT
13_Un.90        -TAAAAACTATTAATAACAAAAAGCATTCC------AGGGGGGTGTCCCT-ATAATTAAT
14.25           -CCATTACCATTTTCATTTCGATTTCTATT------AGCATTTTCATTT---CGATTCCT
15.40           ACCATAACTATCACTATTACCATTACCATCACTAAAAATATTATAATTGATACTATCATT
16.21           -CAATCACCATTACCATTACCATTCTCATT------TCTATTACCATAATTATCATTACC
                   *  *              *                                      

1L_1.1          ATTATCATCGATACCATTATTATCAGTATTATTATTATTATTA--TTAATACAGTTGGTA
1R_Un.350       ATTATCATTTTCATTTTGATTCCTATTACCATTCTTATTTTTA--TTTCCATTACCATTA
2.43            ATTATCATTTTCATTTTGATTCCTATTACCATTCTTATTTTTA--TTTCCATTACCATTA
3.39            AAAAGGCATAACAG-GGTGTCCCTATAAATAATCGAAGATACA--CGTGTATCAGCACAG
4.27            ATTACTATTACCATTACTATCGATATCATTATCAAAATTGTTA--CCATCACTAATACAA
5.33            ATTATCATTTTCATTTCGATTCCTATTACCATTCTTATTTTTA--TTCCAATTACCATTT
6.55            CAAAGGCACAACA----GGTGTCCCTTAAAAAATCGAGATACA--CGTGTATCAGCACAG
7.47a           -------ACCATA----AATATCCATTAACATAAC-------------------------
7.47b           AAAAGGCATAACAG-GGTGTCCCTATAAATAATCGAAGATATA--CGTGTATCAGCACAG
8_Un.1136       AATATTATAATCAATACTATCATTATCAGTATTATTATTATTA--TAATTATTATTATTA
9_Un.20         AAAAGGCATAACAG-GGTGTCCCTATAAATAATCGAAGATATA--CGTGTATCAGCACAG
10.45           ATAACTATCACTATTACCATTACCATTCCTATTAATATTACAA--TCGATACCACCATTA
11.42           AAAAGGCATAACAG-GGTGTCCCTATAAATAATCGAAGATATA--CGTGTATCAGCACAG
12.30           AAAAGGCAAGTCAG-GGTGTCCCTATAATTAATCGAAGACACA--CGTGTACCAGCCACA
13_Un.90        AAGA----TAATAATATAATATAAGAAATAAAATACAGATTTA--TCACCATAGACAATA
14.25           ATTATCATTTTCATTTTGATTCCTATTATCATTCTTATTTTTA--TTTCCATTACCATTA
15.40           ATCAGTATTATTACAATCAGTATCATAATAATTAATATTAAAGATTAAAAATTATTATTA
16.21           ATTATTATTAAAATTATAATCGATATTATCATTATTATTATTA--TTATTATTATTACAA
                            *                 *                             

1L_1.1          TAGTTATAAATATTATGAAAGATTAAAAA--CTATTACTAA---AAAAAGGCATTTTAAG
1R_Un.350       TCATTTCGATTCCTATTATCATTCTTATT--CCCATTCTCA-TTACCATAATTATTTTGA
2.43            TCATTTCGATTCCTATTATCATTCTTATT--CCCATTCTCA-TTACCATAATTATTTTGA
3.39            CA---TCGAGTCAGGCTGGGTTAGGTCAG--GCTGGGTTGGGTTAGGTCAGGCTGGGTTG
4.27            CGTCTACCGTTGTAATCATTAAAGATTAAAAATTATTATTA---AGGCATATTAAAAAGC
5.33            TCATTTCGATTCCTATTACCATTCTTATT---TTTATTCCAATTACCATTTTCATTTCGA
6.55            CA---TCGAGTCAGCTGGGTTAGTCAGCT--GGTTAGTCAG-CTGGGTTAGTCAGCTGGG
7.47a           ------------------------------------------------------------
7.47b           CA---TCGAATCAGGCTGGGTTAGGTCAG--GCTGGGTTAGGTCAGGCAGGGTTAGGTCA
8_Un.1136       CTACTACAATCGCTATCGTAAGAAATATT-ATTAAAGATTAAAAACTATTATTAACAAAA
9_Un.20         CA---TCGAATCAGGCTGGGTTAGGTCAA--GCTGGGTTAA-------------------
10.45           TCGGTATTATTATTATTATTATTAATATT--ATTATTATTA-CAATCGCTATCGTAACAA
11.42           CA---TCGAATCAGGCTGGGTTAGGTCAG--GCTGGGTTAGGTCAGGCTGGGTTAGGTCA
12.30           CTA--TCACGTCAGGCTGGGTTAGGCTAG--GCTGGGTTAGGCTAGGCTGGGTTA-----
13_Un.90        GG---CTGGGTTAGGTCAGGCTGGGTTAG--GTCAGGCTGGGTTAGGTCAGGCTGGGTTA
14.25           TCATTTCGATTCCTATTATCATTCTTATT--CCCATTCTCA-TTACCATAATTATTTTGA
15.40           ACAAAAAGCATTCCAGGGGGGGTGACCATACAATTAATAAGATAATAATATAATATAAGA
16.21           TCGCTATCGTAACAATTATTATTAAAGATTAAAAATTATCATTAACAAAAGGCATTTCAG
                                                                            

1L_1.1          GTGTCCCTATAAT--TGTGTCAGGCTGGGTTAGGCTAGGTCAGGCTGGGTTAGGCTAGGT
1R_Un.350       TTCCTATCATCAT--TCTGGTAACCATTTCCATTATCATTCTCAT--TGGTAATCCA---
2.43            TTCCTATCATCAT--TCTGGTAACCATTTCCATTATCATTCTCATAACTATTACCAGAAC
3.39            GGTTAGGTCAGGC--TGGGTTGGGTTAGGTCAGGCTGGGTTGGGTTAGGTCAGGCTGGGT
4.27            ATTCCAGGGTGTC--CCATATAAATAATGGAAGACACACGTGTATCAGCACAGCATCGAG
5.33            TTCCTATTATCAT--TTTCATTTCGATTCCTATTATCAATCTTATTTTTATTTCCATAAC
6.55            TAGTCAGCTGGGT--TAGGTCAGCTGGTAGTCAGCTGGTAGTCAG--CTGGTAGTCAGCT
7.47a           ------------------------------------------------------------
7.47b           GGCTGGGTTAGGT--CAGGCTGGGTTACGTTAGTGTGGGTTAGGTCAGGCTGGGTTAGGT
8_Un.1136       GGCATTTCAGGGTGTCCCTATATATAATCGAAGACACACGTGTATCAGCACAACAACGAG
9_Un.20         ------------------------------------------------------------
10.45           TTATTATTAAAGA--T-TAAAAACTATTATTAACAAAAGGCATTTCAGGGTGTCCCTATA
11.42           GGCTGGGTTAGG------------------------------------------------
12.30           ------------------------------------------------------------
13_Un.90        GGTCAGGCTGGGT--TAGGTCAGGCTGGGTTAGGTCAGGCTGGGTTAGGTCAGGCTGGGT
14.25           TTCCTATCATCAT--TTTCATTTCGATTTCCATTATCATTCTCATAACTATTACCAGAAC
15.40           AATAAAATACAGATTTATCACTATAAATGCTGGGCTGGGTTAGGTTAGGTTAGGTTAGGT
16.21           GGTGTCCCTATAA--TTTATAAGATAATAATATAATATAAGAAATAAAATACACGTGCAT
                                                                            

1L_1.1          CAGGCTGG-GTTAGGCTAGGTCAGGCTGGGTTAGGCTAGGTCAGGCT-GGGTTAGGCTAA
1R_Un.350       ------------------------------------------------------------
2.43            TATAACCA-TCATCATTAGCATTACCATTACCATTCTCATTCCTATTATCATAATTATCC
3.39            TGGGTTAG-GTCAGGCTGGGTTGGGTTAGGTCAGGCTGGGTTGGGTTAGGTC--------
4.27            TCAGGCTGGGTTAGGTCAGGCTGGGTTAGGTCAGGCTGGGTTAGGTC-AGGCTGGGTTAG
5.33            CATTTTCATTTCGATTCCTAATATCATTCTTATTCCCATTCTCATTCTCATTGGGAATTG
6.55            GGTAGTCA-GCTGTAGTCAGCTGTAGTCAGCTGTAGTCAGCTGTAGT-CAGCTGTAGTCA
7.47a           ------------------------------------------------------------
7.47b           CAGGCTGG--GTAGGTCA------------------------------------------
8_Un.1136       TGAGGCTGGGTTAGGTCAGGCTGGGTTAGGTCAGGCTGGGTTGGGTC-AGGCTGGGTTGG
9_Un.20         ------------------------------------------------------------
10.45           ATTAATTG-AAGACACACGTGTACCAGCCACACTATCATGTCAGGCT-GGGTTGGGTGAG
11.42           ------------------------------------------------------------
12.30           ------------------------------------------------------------
13_Un.90        TAGGTCAG-GCTGGGTTAGGT---------------------------------------
14.25           TATAACCA-TCACCATTACCATTACCATTACCATTCTCATTCCTATTATCATAATTATCC
15.40           TAGGTTAG-GTTAGGTTAGGGTAGGATAGGTTAGGTTAGGTTAGGTT-AGGTTAGGTTAG
16.21           TAATACAGTATTAAGCTAGAATGGGTTAGGTCAGGCTGGGTTAGGTC-AGGCTGGGTTAG
                                                                            

1L_1.1          GTCAGGCTGGGATTAGGGCTAGTCAGGCTGGGTA--------------------------
1R_Un.350       ------------------------------------------------------------
2.43            TTATTACCATTACCGTTATTATTAAGATTATAAGCGATATTATCATTATCGGTATTATTA
3.39            ------------------------------------------------------------
4.27            GTCAGGCTGG-GTTAGGTCAGGCTGGGTTGGGTCAGGCTGGGTTGGGTCAGGCTGGGTTG
5.33            ATTCCTATATCACTCTTTTGGAAT------------------------------------
6.55            GCTGTAGTCATGCTGTAGTCAGCTGGTAGTCACGCTCTGTAGTCACGCTGTAGTCAGCTG
7.47a           ------------------------------------------------------------
7.47b           ------------------------------------------------------------
8_Un.1136       GTCAGGCTGG-GTTGGGTCAGGCTGGGTTGGGTCAGGCTGGGTT----------------
9_Un.20         ------------------------------------------------------------
10.45           GTCAGGCTGG-GCTGGGTTAGGTCA-----------------------------------
11.42           ------------------------------------------------------------
12.30           ------------------------------------------------------------
13_Un.90        ------------------------------------------------------------
14.25           TTATTACCATTACCATTGCTAATAATATTATAATCGATATTATCATTATCAGTATTATTA
15.40           GTTAGGTTAG-GTTAGGGTAATTAGGTTAGGTTAGGTCAGGATTTGTAGGTTAGG-----
16.21           GTCAGGCTGG-GTTAGGTCAGGCTGGGTTAGG----------------------------
                                                                            

1L_1.1          ------------------------------------------------------------
1R_Un.350       ------------------------------------------------------------
2.43            GTATTCCTATTACAATCGCTATCGGAGGAATTGTTGATTGAAGATTAAAAACTGGTTATT
3.39            ------------------------------------------------------------
4.27            GGTCAGGCTGGGTT----------------------------------------------
5.33            ------------------------------------------------------------
6.55            TTAGTCACGCTG------------------------------------------------
7.47a           ------------------------------------------------------------
7.47b           ------------------------------------------------------------
8_Un.1136       ------------------------------------------------------------
9_Un.20         ------------------------------------------------------------
10.45           ------------------------------------------------------------
11.42           ------------------------------------------------------------
12.30           ------------------------------------------------------------
13_Un.90        ------------------------------------------------------------
14.25           TTATTCTTATTACAATCGCTATCGTAACAATTATTATTGAAGATTAAAAGCTGTTATTAA
15.40           ------------------------------------------------------------
16.21           ------------------------------------------------------------
                                                                            

1L_1.1          ------------------------------------------------------------
1R_Un.350       ------------------------------------------------------------
2.43            AAC---------------------------------------------------------
3.39            ------------------------------------------------------------
4.27            ------------------------------------------------------------
5.33            ------------------------------------------------------------
6.55            ------------------------------------------------------------
7.47a           ------------------------------------------------------------
7.47b           ------------------------------------------------------------
8_Un.1136       ------------------------------------------------------------
9_Un.20         ------------------------------------------------------------
10.45           ------------------------------------------------------------
11.42           ------------------------------------------------------------
12.30           ------------------------------------------------------------
13_Un.90        ------------------------------------------------------------
14.25           CAAAAGGCATTTCAGGGTGTCCCCCATAAATAATCGAAGACACACGCGTACCAGCCATAC
15.40           ------------------------------------------------------------
16.21           ------------------------------------------------------------
                                                                            

1L_1.1          ------------------------------------------------------------
1R_Un.350       ------------------------------------------------------------
2.43            ------------------------------------------------------------
3.39            ------------------------------------------------------------
4.27            ------------------------------------------------------------
5.33            ------------------------------------------------------------
6.55            ------------------------------------------------------------
7.47a           ------------------------------------------------------------
7.47b           ------------------------------------------------------------
8_Un.1136       ------------------------------------------------------------
9_Un.20         ------------------------------------------------------------
10.45           ------------------------------------------------------------
11.42           ------------------------------------------------------------
12.30           ------------------------------------------------------------
13_Un.90        ------------------------------------------------------------
14.25           CATCACGTCAGGCTGGGTTAGGTCAGGCTGGGTTAGGTCAGGCTGGGTTAGGTCAGGCTG
15.40           ------------------------------------------------------------
16.21           ------------------------------------------------------------
                                                                            

1L_1.1          ---------------
1R_Un.350       ---------------
2.43            ---------------
3.39            ---------------
4.27            ---------------
5.33            ---------------
6.55            ---------------
7.47a           ---------------
7.47b           ---------------
8_Un.1136       ---------------
9_Un.20         ---------------
10.45           ---------------
11.42           ---------------
12.30           ---------------
13_Un.90        ---------------
14.25           GGTTAGGTCAGGCTG
15.40           ---------------
16.21           ---------------