>HIV1     
-------------------------------------------EGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYEL
>SIVagm   
-------------------------------------------EGKISRVGGENAYNTPIFCIKKKDKSQWRMLVDFRELNKATQDFFEVQLGIPHPAGLRKMRQITVLDVGDAYYSIPLDPNFRKYTAFTIPTVNNQGPGIRYQFNCLPQGWKGSPTIFQNTAASILEEIKRNLPALTIVQYMDDLWVGSQENEHTHDKLVEQLRTKLQAWGLETPEKKMQKEPPYEWMGYKL
>HIV2rod  
-------------------------------------------EGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKRRITVLDVGDAYFSIPLHEDFRPYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANKDVIIIQYMDDILIASDRTDLEHDRVVLQLKELLNGLGFSTPDEKFQKDPPYHWMGYEL
>SIVmac   
-------------------------------------------DGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNRVTQDFTEVQLGIPHPAGLAKRKRITVLDIGDAYFSIPLDEEFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRHVLEPFRKANPDVTLVQYMDDILIASDRTDLEHDRVVLQLKELLNSIGFSSPEEKFQKDPPFQWMGYEL
>EIAV     
-------------------------------------------EGKISEASDNNPYNSPIFVIKKKSGK-WRLLQDLRELNKTVQVGTEISRGLPHPGGLIKCKHMYVLDIGDAYFTIPLDPEFRPYTAFTIPSINHQEPDKRYVWNCLPQGFVLSPYIYQKTLQEILQPFRERYPEVQLYQYMDDLFVGSNGSKKQHKELIIELRAILLEKGFETPDDKLQEVPPYSWLGYQL
>FIV      
-------------------------------------------EGKVKRADSNNPWNTPVFAIKKKSGK-WRMLIDFRELNKLTEKGAEVQLGLPHPAGLQIKKQVTVLDIGDAYFTIPLDPDYAPYTAFTLPRKNNAGPGRRFVWCSLPQGWILSPLIYQSTLDNIIQPFIRQNPQLDIYQYMDDIYIGSNLSKKEHKEKVEELRKLLLWWGFETPEDKLQEEPPYTWMGYEL
>VISNA    
-------------------------------------------EGKVGRAPPHWTCNTPIFCIKKKSGK-WRMLIDFRELNKQTEDLAEAQLGLPHPGGLQRKKHVTILDIGDAYFTIPLYEPYRQYTCFTMLSPNNLGPCVRYYWKVLPQGWKLSPAVYQFTMQKILRGWIEEHPMIQFGIYMDDIYIGSDLGLEEHRGIVNELASYIAQYGFMLPEDKRQEGYPAKWLGFEL
>CAEV     
-------------------------------------------KKKLGKAPPHWTCNTPIFCIKKKSGK-WKMLIDFRKLNKQTEDLTEAQLGLPHPGGLQKKKHVTILDIGDAYFTIPLYKPYREYTCFTLLSPNNLGPCKRYYWKVLPQGWKLSPSVYQFTMQEILGEWIQEHPEIQFRIYMDDIYIRSDLEIKKHREIVEELANYIAQYRFTLPEEKRQERYPAKWLGYEL
>SIVmnd   
-------------------------------------------EGKISRVDPGNNYNTPIFAIKKKDKNEWRKLIDFRELNKLTQDFHELQLGIPHPAGIKKCKRITVLDIGDAYFSIPLDPDYRPYTAFTVPSVNNQAPGKRYMYNVLPQGWKGSPCIFQGTVASLLEVFRKNHPTVQLYQYMDDLFVGSDYTAEEHEKAIVELRALLMTWNLETPEKKYQKEPPFHWMGYEL
>BIV      
-------------------------------------------EGKISEAAWDNPYNTPVFVIKKKGTGRWRMLMDFRELNKITVKGQEFSTGLPYPPGIKECEHLTAIDIKDAYFTIPLHEDFRPFTAFSVVPVNREGPIERFQWNVLPQGWVCSPAIYQTTTQKIIENIKKSHPDVMLYQYMDDLLIGSNRDD--HKQIVQEIRDKLGSYGFKTPDEKVQ-EERVKWIGFEL
>SRV2     
-------------------------------------------LQAGHIIESNSPWNTPIFVIKKKSGK-WRLLQDLRAVNATMVLMGALQPGLPSPVAIPQGYFKIVIDLKDCFFTIPLQPVDQKRFAFSLPSTNFKQPMKRYQWKVLPQGMANSPTLCQKYVAAAIEPVRKSWAQMYIIHYMDDILIAGKLGEQ-VLQCFAQLKQALTTTGLQIAPEKVQLQDPYTYLGFQI
>SRV1     
-------------------------------------------LEAGHITESNSPWNTPIFVIKKKSGK-WRLLQDLRAVNATMVLMGALQPGLPSPVAIPQGYLKIIIDLKDCFFSIPLHPSDQKRFAFSLPSTNFKEPMQRFQWKVLPQRMANSPTLCQKYVATAIHKVRHAWKQMYIIHYMDDILIAGKDGQQ-VLQCFDQLKQELTIAGLHIAPEKIQLQDPYTYLGFEL
>SMRV-H   
-------------------------------------------LAAGHIEPTNSPWNTPIFIIKKKSGS-WRLLQDLRAVNKVMVPMGALQPGLPSPVAIPLNYHKIVIDLKDCFFTIPLHPEDRPYFAFSVPQINFQSPMPRYQWKVLPQGMANSPTLCQKFVAAAIAPVRSQWPEAYILHYMDDILLACDSAEA-AKACYAHIISCLTSYGLKIAPDKVQVSEPFSYLGFEL
>HERV-K   
-------------------------------------------LEKGHIEPSFSPWNSPVFVIQKKSGK-WHTLTDLRAVNAVIQPMGPLQPGLPSPAMIPKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDK-LIDCYTFLQAEVANAGLAIASDKIQTSTPFHYLGMQI
>MPMV     
-------------------------------------------LEAGHITESSSPWNTPIFVIKKKSGK-WRLLQDLRAVNATMVLMGALQPGLPSPVAIPQGYLKIIIDLKDCFFSIPLHPSDQKRFAFSLPSTNFKEPMQRPQWKVLPQGMANSPTLCQKYVATAIHKVRHAWKQMYIIHYMDDILIAGKDGQQ-VLQCFDQLKQELTAAGLHIAPEKVQLQDPYTYLGFEL
>MMTV     
-------------------------------------------LQLGHLEESNSPWNTPVFVIKKKSGK-WRLLQDLRAVNATMHDMGALQPGLPSPVAVPKGWEIIIIDLQDCFFNIKLHPEDCKRFAFSVPSPNFKRPYQRFQWKVLPQGMKNSPTLCQKFVDKAILTVRDKYQDSYIVHYMDDILLAHPSRSI-VDEILTSMIQALNKHGLVVSTEKIQKYDNLKYLGTHI
>IAP-M    
-------------------------------------------LKLGHIDPSTSPDNTPIFVIKKKSGK-WRLLHDLRPINEQMALFGPVQRGLPVLSRLPRGWNLIIIDIKDCFFSIPLCPRDRPRFAFTAPSINSDEPDNRYQWKVLPQGMSNSPTMCQLYVQEALLPVREQFPSLILLLYMDDILLCHKELTM-LQKAYPFLLKTLSQWGLQIATEKVQISDTGQFLGSVV
>IAP-H    
-------------------------------------------ERLGHLEPSTSPWNTPIFVIKKKSGK-WRLLHDLRAINNQMHLFGPVQRGLPLLSALPQDWKLIIIDIKDCFFSIPLYPRDRPRFAFTIPSLNHMEPDKRFQWKVLPQGMANSPTICQLYVQEALEPIRKQFTSLIVIHYMDDILICHKELDV-LQKAFPMLVAELKQWGLEIASEKVQIADTGLFLGSKI
>RSV      
-------------------------------------------LQLGHIEPSLSCWNTPVFVIRKASGS-YRLLHDLRAVNAKLVPFGAVQQGAPVLSALPRGWPLMVLDLKDCFFSIPLAEQDREAFAFTLPSVNNQAPARRFQWKVLPQGMTCSPTICQLVVGQVLEPLRLKHPSLCMLHYMDDLLLAASSHDG-LEAAGEEVISTLERAGFTISPDKVQREPGVQYLGYKL
>BLV      
-------------------------------------------LEAGYISPWDGPGNNPVFPVRKPNGA-WRFVHDLRATNALTKPIPALSPGPPDLTAPTHPPHIICLDLKDAFFQIPVEDRFRFYLSFTLPSPGGLQPHRRFAWRVLPQGFINSPALFERALQEPLRQVSAAFSQSLLVSYMDDILYASPTEEQ-RSQCYQALAARLRDLGFQVASEKTSQPSPVPFLGQMV
>HTLV2    
-------------------------------------------LEAGHIEPYSGPGNNPVFPVKKPNGK-WRFIHDLRATNAITTTLTSPSPGPPDLTSPTALPHLQTIDLTDAFFQIPLPKQYQPYFAFTIPQPCNYGPGTRYAWTVLPQGFKNSPTLFEQQLAAVLNPMRKMFPTSTIVQYMDDILLASPTNEE-LQQLSQLTLQALTTHGLPISQEKTQQPGQIRFLGQVI
>HTLV1    
-------------------------------------------LEAGHIEPYTGPGNNPVFPVKKANGT-WRFIHDLRATNSLTIDLSSSSPGPPDLSSPTTLAHLQTIDLRDAFFQIPLPKQFQPYFAFTVPQQCNYGPGTRYAWKVLPQGFKNSPTLFEMQLAHILQPIRQAFPQCTILQYMDDILLASPSHED-LLLLSEATMASLISHGLPVSENKTQQPGTIKFLGQII
>MuRRS    
-------------------------------------------LQLGILVPCQSPWNTPLLSVKKPGTSDY-PVQDLREVNKPVQDIHPTVPNPYNLLSPPEQKWYTVLDLKDAFFCLKLHPSSQPIFAFEWRDPDT-GQTGQLTWMW-PQEFKNSPTLFDEALHRDLASFRAENSQVTLLQYVDDLLLAATTEEN-CWQGTKRLLAELGELGYRASAKKAQLQMELVYLRYTL
>HERV-E   
-------------------------------------------RTFRIIVPCQSPWNTPLLPVPKPGTK-YRPVQDLRLVNQATVTLHPTVPNLYTLLGPAEDSWFTCLDLKDAFFSIRLAPERQKLFAFQWEDPES-GVTTQYTWTQLPQRFKNSPTIFGEALARDLQKFPTRDLGCVLLQYVDDLLLGHPTAVG-WPREQMLYSGTWRTVGIRCPRKKAQIRQQVCYLGFTI
>BaERV    
-------------------------------------------LELGVLRPCRSPWNTPLLPVKKPGTQDYRPVQDLREINKRTVDIHPTVPNPYNLLSKPDYSWYTVLDLKDAFFCLPLAPQSQELFAFEWKDPER-GISGQLTWTRLPQGFKNSPTLFDEALHRDLTDFRTQHPEVTLLQYVDDLLLAAPTKKA-CTQGTRHLLQELGEKGYRASAKKAQIQTKVTYLGYIL
>GaLV     
-------------------------------------------LDLGVLVPCRSPWNTPLLPVKKPGTNDYRPVQDLREINKRVQDIHPTVPNPYNLLSPPSYTWYSVLDLKDAFFCLRLHPNSQPLFAFEWKDPEK-GNTGQLTWTRLPQGFKNSPTLFDEALHRDLAPFRALNPQVVLLQYVDDLLVAAPTYED-CKKGTQKLLQELSKLGYRVSAKKAQLQREVTYLGYLL
>FeLV     
-------------------------------------------LDQGILKPCQSPWNTPLLPVKKPGTKDYRPVQDLREVNKRVEDIHPTVPNPYNLLSPPSHPWYTVLDLKDAFFCLRLHSESQLLFAFEWRDPEI-GLSGQLTWTRLPQGFKNSPTLFDEALHSDLADFRVRYPALVLLQYVDDLLLAAATRTE-CLEGTKALLETLGNKGYRASAKKAQILQEVTYLGYSL
>MuLV     
-------------------------------------------LDQGILVPCQSPWNTPLLPVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEM-GISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELD-CQQGTRALLQTLGNLGYRASAKKAQIQKQVKYLGYLL
>HSRV     
-------------------------------------------LKQGVLTPQNSTMNTPVYPVPKPDGR-WRMVLDYREVNKTIPLTAAQNQHSAGILAIVRQKYKTTLDLANGFWAHPITPESYWLTAFTWQ-------GKQYCWTRLPQGFLNSPALFTADVVDLLKEIPN------VQVYVDDIYLSHDDPKE-HVQQLEKVFQILLQAGYVVSLKKSEIQKTVEFLGFNI