TY  - JOUR
A1  - Bzikadze, Andrey V.
A1  - Mikheenko, Alla
A1  - Pevzner, Pavel A.
T1  - Fast and accurate mapping of long reads to complete genome assemblies with VerityMap
Y1  - 2022/11/15 
JF  - Genome Research 
JO  - Genome Research 
DO  - 10.1101/gr.276871.122 
SP  - gr.276871.122 
UR  - http://genome.cshlp.org/content/early/2022/11/15/gr.276871.122.abstract 
N2  - Recent advancements in long-read sequencing have enabled the telomere-to-telomere (complete) assembly of a human genome and are now contributing to the haplotype-resolved complete assemblies of multiple human genomes. Since the accuracy of read mapping tools deteriorates in highly-repetitive regions, there is a need to develop accurate, error-exposing (detecting potential assembly errors), and diploid-aware (distinguishing different haplotypes) tools for read mapping in complete assemblies. We describe the first accurate, error-exposing, and partially diploid-aware VerityMap tool for long-read mapping to complete assemblies. 
ER  -