RT Journal A1 Cox, Brian J. A1 Vollmer, Marion A1 Tamplin, Owen A1 Lu, Mei A1 Biechele, Steffen A1 Floss, Thomas A1 Gertsenstein, Marina A1 van Campenhout, Claude A1 Kühn, Ralf A1 Wurst, Wolfgang A1 Lickert, Heiko A1 Rossant, Janet T1 Phenotypic annotation of the mouse X chromosome JF Genome Research JO Genome Research YR 2010 FD June 14 DO 10.1101/gr.105106.110 SP gr.105106.110 UL http://genome.cshlp.org/content/early/2010/06/11/gr.105106.110.abstract AB Mutational screens are an effective means in the functional annotation of the genome. We present a method for a mutational screen of the mouse X chromosome using gene trap technologies. This method has the potential to screen all of the genes on the X chromosome without establishing mutant animals, as all gene-trapped ES cells lines are hemizygous null for mutations on the X chromosome. Based on this method embryonic morphological phenotypes and expression patterns for 58 genes were assessed; approximately 10% of all human and mouse syntenic genes on the X chromosome. Of these 17 are novel embryonic lethal mutations and nine are mutant mouse models of genes associated with genetic disease in humans, including BCOR and PORCN. The rate of lethal mutations is similar to previous mutagenic screens of the autosomes. Interestingly, some genes associated with X-linked mental retardation (XLMR) in humans show lethal phenotypes in mice, suggesting null mutations can not be responsible for all cases of XLMR.