TY  - JOUR
A1  - Alekseyev, Max A.
A1  - Pevzner, Pavel A.
T1  - Breakpoint graphs and ancestral genome reconstructions
Y1  - 2009/05/01 
JF  - Genome Research 
JO  - Genome Research 
DO  - 10.1101/gr.082784.108 
UR  - http://genome.cshlp.org/content/early/2009/04/03/gr.082784.108.abstract 
N2  - Recently completed whole-genome sequencing projects marked the transition from gene-based phylogenetic studies to phylogenomics analysis of entire genomes. We developed an algorithm MGRA for reconstructing ancestral genomes and used it to study the rearrangement history of seven mammalian genomes: human, chimpanzee, macaque, mouse, rat, dog, and opossum. MGRA relies on the notion of the multiple breakpoint graphs to overcome some limitations of the existing approaches to ancestral genome reconstructions. MGRA also generates the rearrangement-based characters guiding the phylogenetic tree reconstruction when the phylogeny is unknown. 
ER  -