RT Journal A1 Smith, Douglas R. A1 Richterich, Peter A1 Rubenfield, Marc A1 Rice, Philip W. A1 Butler, Carol A1 Lee, Hong-Mei A1 Kirst, Susan A1 Gundersen, Kristin A1 Abendschan, Kari A1 Xu, Qinxue A1 Chung, Maria A1 Deloughery, Craig A1 Aldredge, Tyler A1 Maher, James A1 Lundstrom, Ronald A1 Tulig, Craig A1 Falls, Kathleen A1 Imrich, Joan A1 Torrey, Dana A1 Engelstein, Marcy A1 Breton, Gary A1 Madan, Deepika A1 Nietupski, Raymond A1 Seitz, Bruce A1 Connelly, Steven A1 McDougall, Steven A1 Safer, Hershel A1 Gibson, Rene A1 Doucette-Stamm, Lynn A1 Eiglmeier, Karin A1 Bergh, Staffan A1 Cole, Stewart T. A1 Robison, Keith A1 Richterich, Laura A1 Johnson, Jason A1 Church, George M. A1 Mao, Jen-i T1 Multiplex Sequencing of 1.5 Mb of the Mycobacterium leprae Genome JF Genome Research JO Genome Research YR 1997 FD August 01 VO 7 IS 8 SP 802 OP 819 DO 10.1101/gr.7.8.802 UL http://genome.cshlp.org/content/7/8/802.abstract AB The nucleotide sequence of 1.5 Mb of genomic DNA fromMycobacterium leprae was determined using computer-assisted multiplex sequencing technology. This brings the 2.8-Mb M. leprae genome sequence to ∼66% completion. The sequences, derived from 43 recombinant cosmids, contain 1046 putative protein-coding genes, 44 repetitive regions, 3 rRNAs, and 15 tRNAs. The gene density of one per 1.4 kb is slightly lower than that ofMycoplasma (1.2 kb). Of the protein coding genes, 44% have significant matches to genes with well-defined functions. Comparison of 1157 M. leprae and 1564 Mycobacterium tuberculosisproteins shows a complex mosaic of homologous genomic blocks with up to 22 adjacent proteins in conserved map order. Matches to known enzymatic, antigenic, membrane, cell wall, cell division, multidrug resistance, and virulence proteins suggest therapeutic and vaccine targets. Unusual features of the M. leprae genome include large polyketide synthase (pks) operons, inteins, and highly fragmented pseudogenes.[The sequence data described in this paper have been submitted to GenBank under accession nos. L78811–L78829,U00010–U00023, U15180–U15184, U15186, U15187, L01095, L01536, L04666, and L01263. On-line supplementary information for Table 1 is available at http://www.cshl.org/gr.]