TY - JOUR A1 - Krizman, D B A1 - Hofmann, T A A1 - DeSilva, U A1 - Green, E D A1 - Meltzer, P S A1 - Trent, J M T1 - Identification of 3'-terminal exons from yeast artificial chromosomes. Y1 - 1995/06/01 JF - Genome Research JO - Genome Research SP - 322 EP - 326 VL - 4 IS - 6 UR - http://genome.cshlp.org/content/4/6/322.abstract N2 - We report an extension of 3'-terminal exon trapping technology to the identification of transcribed sequences from yeast artificial chromosomes (YACs). A 350-kb YAC containing mouse genomic DNA was gel-purified and used as the target DNA for the 3'-terminal exon trapping strategy. A novel direct ligation/transfection approach was employed to increase the efficiency of trapping 3'-terminal exons from recombinant vector-derived chimeric mRNA. The resulting RT-PCR product was then used to generate a plasmid library. Randomly chosen individual subclones from this library were sequenced, and the results indicate that 86% met sequence criteria characteristic of 3'-terminal exons, whereas 14% were background from identified sources. PCR mapping efforts suggest eight putative last exons present within this YAC, whereas RT-PCR studies demonstrate that three reside within valid expressed sequences. ER -