TY  - JOUR
A1  - Bray, Simon
A1  - Chilton, John
A1  - Bernt, Matthias
A1  - Soranzo, Nicola
A1  - van den Beek, Marius
A1  - Batut, Bérénice
A1  - Rasche, Helena
A1  - Čech, Martin
A1  - Cock, Peter J.A.
A1  - Grüning, Björn
A1  - Nekrutenko, Anton
T1  - The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond
Y1  - 2023/02/01 
JF  - Genome Research 
JO  - Genome Research 
SP  - 261 
EP  - 268 
DO  - 10.1101/gr.276963.122 
VL  - 33 
IS  - 2 
UR  - http://genome.cshlp.org/content/33/2/261.abstract 
N2  - There are thousands of well-maintained high-quality open-source software utilities for all aspects of scientific data analysis. For more than a decade, the Galaxy Project has been providing computational infrastructure and a unified user interface for these tools to make them accessible to a wide range of researchers. To streamline the process of integrating tools and constructing workflows as much as possible, we have developed Planemo, a software development kit for tool and workflow developers and Galaxy power users. Here we outline Planemo's implementation and describe its broad range of functionality for designing, testing, and executing Galaxy tools, workflows, and training material. In addition, we discuss the philosophy underlying Galaxy tool and workflow development, and how Planemo encourages the use of development best practices, such as test-driven development, by its users, including those who are not professional software developers. 
ER  -