@article{Bzikadze01112022,
author = {Bzikadze, Andrey V. and Mikheenko, Alla and Pevzner, Pavel A.}, 
title = {Fast and accurate mapping of long reads to complete genome assemblies with VerityMap},
volume = {32}, 
number = {11-12}, 
pages = {2107-2118}, 
year = {2022}, 
doi = {10.1101/gr.276871.122}, 
abstract ={Recent advancements in long-read sequencing have enabled the telomere-to-telomere (complete) assembly of a human genome and are now contributing to the haplotype-resolved complete assemblies of multiple human genomes. Because the accuracy of read mapping tools deteriorates in highly repetitive regions, there is a need to develop accurate, error-exposing (detecting potential assembly errors), and diploid-aware (distinguishing different haplotypes) tools for read mapping in complete assemblies. We describe the first accurate, error-exposing, and partially diploid-aware VerityMap tool for long-read mapping to complete assemblies.}, 
URL = {http://genome.cshlp.org/content/32/11-12/2107.abstract}, 
eprint = {http://genome.cshlp.org/content/32/11-12/2107.full.pdf+html}, 
journal = {Genome Research} 
}